Globicephala melas (long-finned pilot whale): 115859294
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Entry
115859294 CDS
T11080
Symbol
LMAN1
Name
(RefSeq) protein ERGIC-53 isoform X1
KO
K10080
lectin, mannose-binding 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115859294 (LMAN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115859294 (LMAN1)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
gmf04091
]
115859294 (LMAN1)
Membrane trafficking [BR:
gmf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
115859294 (LMAN1)
Lectins [BR:
gmf04091
]
L-type lectins
115859294 (LMAN1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lectin_leg-like
Bact_lectin
ATG17_like
DHHA1
Lectin_legB
Golgin_A5
DUF4407
Motif
Other DBs
NCBI-GeneID:
115859294
NCBI-ProteinID:
XP_030723937
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All DBs
Position
13:complement(14649733..14678740)
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AA seq
518 aa
AA seq
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MAGSRQRGSRAGARPLFCALLLSLCRFVGGDGVGGHPAAAGATGTPGAQPHRRFEYKYSF
KGPHLVQSDGTVPFWAHAGNAIPSSDQIRIAPSLKSQRGSVWTKTKAAFENWEVEVTFRV
TGRGRIGADGLAIWYTENQGLEGPVFGSADMWNGVGIFFDSFDNDGKKNNPAIVIIGNNG
QIQYDHQNDGANQALASCQRDFRNKPYPVRAKITYYQKTLTVMINNGFTPDKNDYEFCTK
VENMIIPAQGHFGISAATGGLADDHDVLSFLTFQLTEPGKEPPTPDKEISEKEKEKYQEE
FEHFQQELDKKKEEFQKDHPDLQGQPADELFETVGDRELRQIFEGQNRIHLEIKQLNRQL
DMILDEQRRYVSSLTEEISKRGAGIPGQHGQTTQQELDTVVNTQHEILRQVNEMKNSVSE
TVRLVSGIQHPGSAGGVYETTQHFNDIKEHLHIVKRDIDNLVQRNMPANERLKCPELPPF
PSCLSTVHFVIFVVVQTVLFIAYIMYRTQQEAAAKKFF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcgggatccaggcaaaggggttcccgggccggagctcggccgctgttctgcgctttg
ctgctgtcgctctgtcgtttcgtcgggggcgacggcgtgggaggccacccggcagctgcc
ggcgccacgggcaccccaggcgcgcagccgcatcggcgtttcgagtacaaatacagcttc
aagggaccgcacctggtgcagagcgacgggaccgtgcccttctgggcccacgcggggaat
gctattccaagttcagatcaaattcgaatagcaccatctttaaaaagccaaagaggatcg
gtgtggacaaagacaaaagcagcctttgagaactgggaagttgaggtgacatttcgagtg
actggaagaggtcggattggagctgatggcctggcaatttggtatacagaaaatcaaggc
ttggagggtcctgtgtttggatcagctgatatgtggaatggtgttggaatattttttgat
tcttttgacaatgatggaaagaaaaataatcctgcaatagtgattataggcaacaatgga
caaatccaatatgaccatcaaaatgatggtgctaatcaagctttagcaagttgccaaagg
gactttcgtaataaaccctatcctgtccgggcaaagattacgtattaccagaaaacattg
acagtaatgatcaataatggcttcacaccagacaaaaatgattatgaattttgcaccaaa
gtggaaaatatgattatccctgcacaggggcattttggaatatctgctgcaactggaggt
cttgcagatgaccatgatgtcctttcttttctgactttccagttgactgagcctgggaaa
gagccgcctacaccagataaagaaatttctgagaaagaaaaagaaaagtaccaggaggaa
tttgagcactttcaacaagaattggataaaaaaaaggaggaattccagaaggaccaccct
gaccttcaagggcagcctgcagatgaattatttgagactgtaggagatcgtgagctgaga
caaatctttgaaggacagaatcgtattcatcttgaaatcaagcagctgaaccgacagtta
gatatgattcttgatgaacagagaaggtatgtctcttccttgacggaggagatctctaaa
agaggagcaggaatcccagggcagcatggacagaccactcaacaagaactggatactgtt
gtgaatactcagcatgagattctgagacaagtaaatgaaatgaagaattccgtgagtgaa
actgtcagactggtcagtggcatacagcatcctggatctgcagggggcgtttatgagaca
acccagcacttcaatgacatcaaagagcacctccacatagtgaagcgggacatagataac
ttagtgcagcgaaatatgccagcaaatgaaagactgaaatgtccagaactaccgccattt
ccatcgtgtctgtctacggtgcactttgttatatttgtagtggtacaaacggtgttgttc
attgcttatatcatgtataggactcagcaagaagcagctgccaaaaaattcttctga
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