Globicephala melas (long-finned pilot whale): 115859332
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Entry
115859332 CDS
T11080
Symbol
RTTN
Name
(RefSeq) rotatin isoform X1
KO
K16484
rotatin
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gmf03037
]
115859332 (RTTN)
Cilium and associated proteins [BR:
gmf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115859332 (RTTN)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RTTN_N
Phage_T3_1_05
Motif
Other DBs
NCBI-GeneID:
115859332
NCBI-ProteinID:
XP_030724010
LinkDB
All DBs
Position
13:complement(22663276..22809369)
Genome browser
AA seq
2230 aa
AA seq
DB search
MVLTGLIRKLGHQLAEIRARALKNILCKIEHSLICCADLVQERLLFLHLLEWFNFPSVPM
KEEVLSLLNRLVKYPPAVQHLVDLGAVEFLSKLRSNVEPNLQAEIDGILDGLFILPSEVP
ELHSASYQTNQTELPQQPEILTGYFPQDKSTFQQMEVPPRPVAANPTAKCLKFSTFPWLP
LTTADRHVLSSNESSLRSSNHTLIWNTCELLKDVIMQDFPAEIFLQRPKIVQSLLSLLKL
AFGGDGKHRLALQSVSCLQQLCTYLRNRLNFHRDPSFFSSKQDTVSQNSSLSYCHEARVT
HHSQNPSPGSSSPRPSVVGRTGQRPRGDGQDWDAVSSSGSSSHAHVNSRVSIPSPLDMVH
LDLPELEAEDTLELQFQQLSLPQLCVSILECAVPLLRTGSRQMIIRVLELLAEDMVLIGE
AISADIWDDSSLFAIDMKKKLLMVLGSLGDSICYHKSNISLEQPEAVLVHHRMAFVSISL
FAVRLLQTLLPVEKASNFLPEPMSAALFLVSLDMPLSLEYPNIHEAVVAYLEQLNSENYS
IYKRTAEAVYSLECTCNFLSDVGKEGEKNLLELVELADQALHSFSYHQHFPLIKEIICIC
SKIWKSAQASPLLQGESQKVFLRMLSHPLPQVKVKTYHCCLEIVKECLGVHNVSKPVSSL
CNGIHFLLHPKVLYEISAFGIQEPKNEVNATAKAILMHLLQGRLRMTALTWNKFIESLCP
VIPVLQGYADTEDPLGNCILLLSKASSEAGEGILPCTTWLKSILRLLLVKKPSVRMLALK
LLASHLTREEGADTKRPSIDARVLSRVTNLFIVKKPIELKLDDRRELIIKLETVEKVYDI
FISDDIDLILRKSAAEQLAVIMQDIKMHAVVKKLCLTDKIIEYLNKCVSQDGEVIECLVQ
PSLTLLRKVLCADPVLRVSLSQQPSLLTLLFRVSLIFHEDCTVVTEVGALFCLLLFDEVS
RMDMWSDNLSSKPSSPSVFSLPVSVSRRYHLPVHVLGHHAVSPYSIVLPLSADCLALKPV
SDMLRIAWNLSWYHGSDNLLKQMNSETKIQEFLDTLKLSTEDTLTLKMTHTASGLKDCLR
SIVQAAAHREVRAALTRMSFYLLNDRLSFKGGTGPCGITLKSLSWHTTLNRFLQVLPACT
EDEKLLIDIIHFLNKLLKEQRKNVSVELLNWLLELLLRHSPNPLLELLLLTESQAREEAD
DIRTAVRQQLQKELVALFNTLLLGSVALTDRKCLELFYVFQTQLALKLLQCLRVTDAPRF
YGLPSLERTLRGMAHLTAFPGWSSHSPFTKPLEICVKYLSGLLEVITSFYVERGGNAMSF
MGKGVTKSTILCLLHLSHEMMAQAQSSEWMSLWFLPLGSHSEEHATTQQGLAWLIPLWVD
RDPEVRFTSLGLGSALTTLETGCVALANSCQNISGGLWGTVVNIFLDQSECSMVRREAAF
IFQNLLVIPMPSEIIKGYTWQGPCVHDEDSGLSLIGKPALQALLYHCHFYEHLNQMVKHC
YLGRYTFDLNCSALNGTSEGNDLNGLDDSFKFWRAPSRMSSQDRDPSSLSTLETMVAASS
ASTEFQPVVPCTAPLPEASHDQFVAQGQHETASPRLPHDSSLSAPLPRQCVFVTPPLLSA
MCSLLDSLLATTPGDTANAFRQARLIELLCSIADATLIETSVQELQALLPASPPVERTQA
QVSFLLEYLSSLSRLLQSCLLVDPDLVIQDELLKPLITNIIRVLTICTKDISDTELISAF
YQTWTHLFNLLATLLRKAGPASFPSITMGLARYWATMVDMFCKCVGLSSTCPTLCTASLQ
FLSILLTEEAKRYLQDKDKTSLCHSPMMASLLDKTQESQKSLEQLNEVILQCYEVKSSRD
VLKRVAVNALMSLLAVSRRAQKHALKAHLIDSCVEQMKHVHAQLNLESLRPGRAALKKKE
DGFIKELSIAMQLLRNCLYQNEECKEAALEAHLVPVLHSLWPWLLMDDSLMQTALQLLCV
YTANFPNGCSSLCWSSYGQYPVQTAHRGAPGSSLMLCILKMASQVPLENTAVQQMVFMFL
SNLALSHDCKGVIQKSNFLQNFLSLTLPKGGNKHLSNLTILWLKLLLNISFGEDGQQMIL
RLDGCLDLLTEMSKFKHKSSPYLPLLIFHNICFSPANKPKILANEKVISVLASCLESENQ
NAQRIGAAALWALIHNYQKAKTTLKNPSIKRRVDEAYSTAKKTFLNSEETPLNAYYLKCL
ENLVQQLNSS
NT seq
6693 nt
NT seq
+upstream
nt +downstream
nt
atggtcctgacggggctcatcaggaaactgggtcatcagctggccgagatcagggcgcgc
gctctcaagaatattctctgcaagattgagcacagtttaatctgctgtgctgatctggtt
caggagaggctcctttttctccatttgctggaatggttcaatttcccgtccgttccaatg
aaagaagaggttctgagtctgttgaacaggttggttaagtatcccccagcagtccagcat
ttggttgaccttggtgcagtcgaattcttatctaaacttcgttctaatgtggagccgaat
ctacaggctgaaattgatggcattctggatggactttttattcttccttcagaagttcct
gaactacattctgcatcttaccaaaccaatcaaactgaattgccacagcaacctgaaatc
ttaacgggatattttcctcaagacaaaagtactttccagcagatggaagtgcccccgaga
cctgtggcagcaaatccgaccgcgaagtgtttgaagttttctaccttcccttggctcccc
ctgaccacagctgataggcatgttctctcctctaatgaaagctctttaagaagtagtaac
cacactttaatctggaacacctgtgaactgttgaaagacgttatcatgcaagattttcct
gctgagattttccttcaaaggccaaaaattgttcagagccttttatctctgttgaaactg
gcctttggaggagatggaaaacatcgcctggcattgcagtcagtgtcctgcttgcagcag
ctgtgcacgtatttaagaaacagacttaactttcaccgagatccaagttttttctctagt
aaacaagatacagtttcccaaaattcttctctgtcttattgtcatgaagcaagagtcact
catcattcccagaatccttctccaggaagcagcagccctcggccttctgtggtgggacgc
acaggccagcgacccagaggagatggccaggattgggacgccgtgtcttccagtggaagt
agtagtcacgctcatgtcaactcaagggtctccatcccttcccctttggacatggtgcac
ctggacctgccagagctggaggctgaagacacgctagagctgcagttccagcagttgagc
ctgccccagctctgtgtctccatcctggagtgtgccgttcctctcttaagaacaggtagt
agacagatgataataagagttctggaattgcttgcagaggatatggtacttattggtgaa
gcgatttcagcagatatctgggatgacagcagtctttttgctatagatatgaagaagaaa
ctgctcatggtgttggggtcccttggagacagcatatgctaccataaaagcaacatcagt
ttggaacaaccagaggcggtgctggtgcaccacaggatggcctttgtcagcatttcgctg
tttgcagtccgactgctgcagacacttctccctgttgaaaaggcaagcaactttttacca
gagcctatgtcagcagcattatttctagtttctttggacatgcctctttctttggaatat
ccaaatattcatgaagctgttgtggcctatttggaacagctgaattctgaaaactacagt
atttataaacgaactgcagaggctgtttattcacttgagtgtacctgtaacttcctgtct
gatgttgggaaggagggagagaagaatctcttagaattagtggagctggcagaccaagcc
ttacatagcttttcctatcatcagcatttccccctaataaaggaaatcatctgtatttgt
tcaaagatctggaaatctgcacaggccagtccattactacaaggagaaagtcagaaggtg
tttctacgtatgttgtctcaccctttgccacaagtgaaagttaaaacttaccactgttgt
ctggaaattgttaaggaatgtttaggtgtccataatgtcagtaaacctgtgtcttccctt
tgtaatggaattcattttctacttcacccaaaagttctgtatgaaatctctgcgtttggt
attcaagagcccaaaaatgaggtgaatgccactgccaaggccatcctgatgcatctgctg
caggggcgactgaggatgacagcactgacctggaacaagtttatcgagtctctgtgtcct
gtcatcccagtgctacagggctatgctgacacagaggatcctttgggtaactgcattctc
ctcctaagcaaagcgagttctgaggctggtgaagggattctcccctgtaccacctggtta
aagtccatactacggctcctgctggtgaaaaagccatcggtccggatgctggcattaaag
cttttagcaagtcaccttacaagggaagagggggcggataccaagcgcccttcaatcgat
gccagagttctctccagagttactaatttatttattgtgaaaaagcctattgaactcaaa
ttggatgacagaagagaactgattattaagctggagactgttgaaaaggtatatgacatc
tttatctcagacgatattgatcttattttgagaaagtcagctgcagaacagttagctgtg
attatgcaagatattaaaatgcatgctgtggtgaaaaaattatgcttaactgacaagata
attgagtatttaaataaatgtgtgagtcaggatggagaggtaatagagtgtctagtacag
ccaagcctcacgctcctgaggaaggttctctgtgctgacccagtcctacgtgtttccctc
tcccaacaaccttctctcttgaccctgctgttcagagtttccttgatatttcatgaagat
tgtaccgtcgtgactgaagttggagcattattttgtcttctgttatttgatgaagtatca
agaatggatatgtggtctgataatctttccagtaaaccttcttcaccatcagtcttcagt
ttgcctgtttcagtttctagaaggtatcatctaccagtacatgtacttggccaccatgct
gtgagtccttactccatagttttgccgttatctgctgattgtttggccttgaagccggtc
tcagatatgctgagaatagcttggaacctatcatggtatcatgggagtgataatctgttg
aagcaaatgaactctgaaactaaaatccaagaatttttagatacattgaagttatccact
gaggacacccttactctgaagatgacacacacagcaagtggactgaaggactgtctccgc
tccattgttcaggctgcagcccacagggaagtgagggctgctctcacgaggatgagtttt
tatcttctgaatgacagattgtctttcaagggtggcactggcccatgtgggattaccttg
aagtccttgtcttggcacaccacactaaacagatttttacaagtacttcctgcttgcacc
gaagatgagaaactgctaatagatatcatacattttctaaataagttattgaaggaacaa
agaaaaaatgtatccgtagaacttctaaactggcttctcgaattacttcttagacatagt
ccaaacccactattggagctgctgcttctgacagagtcccaggcgcgagaggaagcagat
gacatccgcaccgccgtccggcagcagctccagaaagaactggtcgctctcttcaacacc
ctgctgctcggttccgtggcacttaccgacaggaaatgcttggaacttttttacgttttc
caaacgcagctggctctgaaactgctccagtgtctgagagtcacggatgctcctcgcttc
tacggcctgccgtccctcgagaggaccttacgagggatggcccaccttacagcattcccg
ggatggagctcacactctcctttcacaaagccactagaaatttgtgtgaagtacttgtca
ggtctcctcgaagtcattacttctttttatgtggagcgtggaggaaatgctatgtccttc
atgggaaaaggtgtcacaaagagcacgattctctgcttgcttcacttatcccatgagatg
atggcccaggcccagagctcggagtggatgtcactttggttcttgcctttgggtagtcac
agtgaagaacatgctaccactcaacagggattggcttggttgattccgttgtgggttgac
cgagacccagaggtgaggttcacttcactgggattaggatcggcactgactacccttgaa
actggctgtgtggccttagcaaacagttgtcaaaacatttctggtgggctctggggaact
gtggtgaacatttttctggaccagtcggagtgcagcatggtacgccgggaggctgcattt
atttttcaaaatctccttgtaattccaatgccttcagaaatcataaagggttatacttgg
cagggcccctgtgtccatgatgaggactctggcctgtcgctcataggaaaacctgccctt
caggctcttttgtaccactgccatttttatgaacatttgaatcagatggtaaaacattgt
tacctgggacggtatacgtttgatttgaattgttctgctcttaatggaacttctgaaggc
aatgacttaaatggtttagatgactcattcaagttttggagggctccatctcggatgtcc
agtcaagatcgagatccaagttctctctccactttggaaacaatggtggcagcttcgtcg
gcaagtactgaatttcagccggtagtgccctgcacggcgcctctccctgaagcctcacat
gaccagtttgtggctcaaggtcagcatgaaactgcatctccacggcttcctcatgattca
tccctttctgctcctctgcccagacagtgtgtttttgtcactccgcctcttctttccgcg
atgtgcagcctcctagacagcctcttggcaacgactccaggcgacactgcaaatgctttt
cgacaagctcgtctcatagagcttctttgtagcatcgcagatgccaccctcatagagaca
agcgtccaggagctccaggccctgctgcccgcgtcacctcctgttgaacgcactcaggct
caggtatcctttctcctagaatacctgtcctctttgtccaggcttcttcagtcatgttta
ttggtagatcctgaccttgtgattcaggatgagcttctgaaacctcttatcacaaacatc
atcagagttctcaccatatgcaccaaagatatatcagatacagagttaatatcggctttt
tatcagacatggacacatttatttaaccttctggccacactcctgaggaaagctggccct
gcctctttcccatctattacgatgggtctggccaggtactgggcgacgatggtcgatatg
ttctgcaaatgtgtgggtttgtctagcacctgccccactctgtgtactgccagcctgcaa
ttcctttctattctcctgactgaagaagcaaaaaggtatctccaggataaggataaaaca
agtttatgccacagtccaatgatggcttcacttcttgataaaacccaggaaagtcagaaa
tctctagaacaacttaatgaagtaattcttcagtgttatgaagtaaaatcctccagagat
gtcctgaaaagagtcgctgtgaatgcgctgatgtcgcttctggccgtcagtagaagagca
cagaaacacgctctgaaggcccatctaatagacagttgcgtggagcagatgaagcacgtt
catgcacagctgaacctggaatctctgaggcctgggagggcagcactgaagaaaaaggaa
gatggttttattaaagagttaagcattgccatgcagctcctaagaaactgtctttatcaa
aatgaagaatgtaaagaggcagccctggaagctcatctcgtccctgtcttgcactctctc
tggccttggcttctgatggatgattcactgatgcaaactgccctgcagctgctttgtgtc
tatactgcaaattttccaaatggttgcagttctctctgttggtcaagttacggacaatat
cctgttcaaactgcacatcgaggggcccctggcagctccctgatgctgtgtatcctgaag
atggcttcccaggtgcctctcgagaacactgcagtccagcagatggttttcatgtttctt
tcaaacctggccttgtctcatgactgtaaaggggtaattcaaaaaagtaacttcttacag
aacttcctgtctctaacattgccaaaaggaggaaataaacatctcagtaatctgaccatt
ctttggttgaagttactcctgaacatatcgtttggagaagatgggcagcaaatgatcctg
aggctcgatggctgtttagacttacttacagagatgagcaaattcaagcataagagcagc
ccttatctacctcttcttatttttcataacatttgcttcagccctgccaataagcccaag
atcctggctaatgaaaaagtcattagtgtgctagcttcctgtctggaaagtgagaatcaa
aatgctcagaggattggagcagctgcgctttgggcgttgattcacaattaccaaaaggca
aaaacaactttgaaaaatccatcaataaaaagaagagtggatgaagcatattccacagca
aagaaaactttcttaaactcagaagaaactcctctaaatgcctattatttgaaatgtctt
gaaaaccttgtgcagcaacttaactcttcatga
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integrated database retrieval system
