Globicephala melas (long-finned pilot whale): 115859440
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Entry
115859440 CDS
T11080
Symbol
CAPN2
Name
(RefSeq) calpain-2 catalytic subunit
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04141
Protein processing in endoplasmic reticulum
gmf04210
Apoptosis
gmf04217
Necroptosis
gmf04218
Cellular senescence
gmf04510
Focal adhesion
gmf05010
Alzheimer disease
gmf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115859440 (CAPN2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115859440 (CAPN2)
04217 Necroptosis
115859440 (CAPN2)
04218 Cellular senescence
115859440 (CAPN2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
115859440 (CAPN2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
115859440 (CAPN2)
05022 Pathways of neurodegeneration - multiple diseases
115859440 (CAPN2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmf01002
]
115859440 (CAPN2)
Enzymes [BR:
gmf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
115859440 (CAPN2)
Peptidases and inhibitors [BR:
gmf01002
]
Cysteine peptidases
Family C2: calpain family
115859440 (CAPN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
115859440
NCBI-ProteinID:
XP_030724252
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All DBs
Position
1:21225164..21287515
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AA seq
700 aa
AA seq
DB search
MAGIAVKLARDREAAEGLGSHERAIKYLNQDYAALRDECLEAGALFQDPSFPALPSSLGF
KELGPYSSKTRGIEWKRPTEICDDPQFITGGATRTDICQGALGDCWLLAAIASLTLNEEV
LARVVPLDQSFQENYAGIFHFQFWQYGEWVEVVVDDRLPTKDGELLFVHSVEGSEFWSAL
LEKAYAKINGCYEALSGGATTEGFEDFTGGIAEWYELRKAPPNLFRIIQKALQKGSLLGC
SIDITSAADSEAITFQKLVKGHAYSVTGAEEVESRGSLQKLIRIRNPWGEVEWTGQWNDN
CPNWTTIDPEERERLTRRQEDGEFWMSFNDFLRHYSRLEICNLTPDTLTSDTYKKWKLTK
MDGNWRRGSTAGGCRNYPNTFWMNPQYLIKLEEEDEDQEDGENGCTFLVGLIQKHRRRQR
KMGEDMHTIGFGIYEIPEELTGQNNVHLSKSFFLTHRARERSDTFINLREVLNRFKLPPG
EYILVPSTFEPNKDGDFCIRVFSEKKADYQVVDDEIEANLEEIDVSEDDIDDGFRRLFAQ
LAGEDAEISAFELQTILRRVLARRQDIKSDGFSIETCKIMVDMLDSDGSGKLGLKEFYIL
WTKIQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKMPCQLHQVIVARFADDQLVIDFD
NFVRCLVRLETLFRIFKRLDPEDTGMIQLDLISWLCFSVL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcatcgcggtcaagctggcgagggaccgggaggcggccgaggggctgggctcg
cacgagagggccatcaagtacctcaaccaggactacgcggcgctgcgggacgagtgcctg
gaggccggggcgctcttccaggacccgtccttcccggccctcccgtcttccctgggcttc
aaggagttgggaccctactccagcaagacccggggcatcgagtggaagcggcccacggag
atctgcgatgatccacaatttattactggaggggccactcgcacagacatctgccaagga
gccctgggtgactgctggctactggcagccattgcctccctcaccttgaatgaagaagtc
ctggcccgagtcgtccccttggaccagagcttccaggagaactacgcggggatcttccac
ttccagttctggcagtacggcgaatgggtggaggtggtggtggacgacaggctgcccacc
aaggacggggagctgctcttcgtgcactcggtagagggcagtgagttctggagcgcgctg
ctggagaaggcctacgccaagatcaatgggtgttacgaagcactctccgggggtgccacc
actgagggcttcgaggacttcaccggaggcatcgccgagtggtatgagttaaggaaggcc
cctcccaacctgttcaggatcatccagaaagctctgcagaaaggctctctccttggctgc
tctatcgatatcaccagtgctgcagactcggaggccatcaccttccagaagctggtgaaa
gggcacgcgtactcggtcactggcgccgaggaggtggaaagcagaggaagcctgcagaag
ctgatccgcatccggaatccctggggagaggtggagtggaccgggcagtggaacgacaac
tgcccaaactggaccactattgacccagaggagagggaaaggctgaccagacggcaggaa
gatggggaattctggatgtctttcaacgacttcctgaggcactattcccgcctggagatc
tgcaacctgacccctgacacgctgaccagtgacacctacaagaagtggaaactcaccaag
atggatgggaactggaggcggggctccaccgcgggcggctgcaggaactacccgaatacc
ttctggatgaaccctcagtacctgatcaagttggaggaggaggacgaagaccaggaggac
ggggagaacggctgcaccttcctggtgggtctcatccagaagcaccggcggcggcagagg
aagatgggcgaggacatgcacaccattggcttcggcatctatgagattccagaggagttg
acaggacagaacaacgtccacctcagcaagagcttcttcctgactcaccgagcgagggag
cggtcggacaccttcatcaacctgcgggaggtgctcaaccgcttcaagctgcccccgggg
gagtacatcctggtgccgtccaccttcgagcccaacaaggacggggacttctgcatccgg
gtcttttccgagaagaaagctgactaccaagttgtcgacgacgaaatcgaggccaacctt
gaagagattgatgtcagcgaggacgacatcgatgatggattcaggaggctgtttgcccag
ttggcaggagaggatgcagagatctctgcctttgagttgcagacaatcctgagaagagtt
ctggcaaggcgccaagatatcaagtcagacggcttcagcatagagacctgcaaaatcatg
gttgacatgctcgattcggatgggagtggcaagctgggtctgaaggagttctacattctt
tggaccaagattcagaaataccaaaaaatttaccgggagatcgacgtggacaggtccgga
accatgaactcctatgagatgcggaaagcattagaagaagcaggtttcaagatgccctgt
cagctccaccaagtcatcgttgctcggttcgcagatgaccagctcgtcatcgattttgac
aattttgttaggtgtttggttcgactggaaacactattcaggatatttaagcggctggac
cccgaggatactggtatgatccagcttgaccttatctcttggctgtgtttttcagtactt
tga
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