Globicephala melas (long-finned pilot whale): 115859446
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Entry
115859446 CDS
T11080
Symbol
NVL
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115859446 (NVL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmf03009
]
115859446 (NVL)
Ribosome biogenesis [BR:
gmf03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
115859446 (NVL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_22
AAA_14
TIP49
AAA_2
AAA_28
AAA_33
NPHP3_N
nSTAND3
Mg_chelatase
RNA_helicase
AAA_17
AAA_18
Zeta_toxin
ABC_tran
NACHT
nSTAND_NTPase5
AAA_3
ATPase
IstB_IS21
Rad17
TsaE
Vps4_C
Viral_helicase1
Sigma54_activat
Sigma54_activ_2
DUF3540
DUF4473
Motif
Other DBs
NCBI-GeneID:
115859446
NCBI-ProteinID:
XP_030724258
LinkDB
All DBs
Position
1:complement(21513686..21623491)
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AA seq
856 aa
AA seq
DB search
MKPRHARFVDNKLKQRVVQYLTSNRCGKYVDTGVLASDLQRMYSIDYGRRKRNAFRIQVE
KVFSIISSEKELKDLPELEDEHLAKRARHGEEDNEYNESYSDDDSNMEDYPDPQSANQMN
SSLLFLYRKGNPDSVSSTPDMERRETTISTPRITSKTGSIRLKTPARGSEGGWFIDKTPG
GKKDSFFSDLSDEKSNDKKPISEIENSKDSSLLESNKKRKGRLNSKRGKRKKEDLQEVDG
EIEAVLLKKAKARGLELQISKVKFEDVGGNDTTLKEVCKMLIHMRHPEVYHHLGVIPPRG
VLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSNAPCI
LFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNDMAATARVLVIGATNRPDSLDPAL
RRAGRFDREICLGIPDEASRERILQTLCRKVRLPETFHFRHLAHLTPGFVGADLMALCRE
AAMCAVNRVLMKLQEQQQKNPEIEGLPSEGGQEERIGTEPTSKTQDELQSLLGLLRNQDP
LSEEQLQGLCLELNDFIVALSSVQPSAKREGFVTVPNVTWADIGALEDIREELTMAILAP
VRNPDQFKALGLETPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE
RAVRQVFQRAKNSAPCVIFFDEVDALCPRRSVRETGASVRVVNQLLTEMDGLETRQQVFI
MAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAVA
GDLRCDCYTGADLSALVREASICALKQEMARQKSGSEKGELKVSQKHFEEAFKKVKSSVS
KEDQAMYEALQWSLSR
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaggcacgcgaggtttgtggataataagctgaagcagcgcgtcgtccagtac
ctcaccagtaaccgatgtggcaaatatgtggacactggagtcttagcatccgatttacaa
agaatgtacagtatagactatggtcgaagaaaaagaaatgcttttaggattcaggtagaa
aaagtatttagcataattagtagtgagaaggaacttaaggatctaccagaattagaagat
gaacatctggctaaaagagcaagacatggtgaagaggataatgagtataatgaaagctat
tctgatgatgattcaaatatggaagattacccagatccacagtcagcaaatcagatgaac
agttccctgctcttcttataccggaaaggaaatcctgattctgtttcaagtactcctgac
atggagcgaagagaaaccacgatttcaacaccacggataacttccaaaacaggctccatt
cgtttgaagacccctgccagaggttctgaaggaggatggtttattgacaaaaccccgggt
gggaagaaagacagttttttctcagacctatcagatgagaaaagtaatgataagaagccg
atctctgagatagagaattcaaaagattcttctcttctggagagtaataaaaaaagaaaa
ggcaggctaaacagcaaaagaggcaaaaggaagaaagaagatcttcaggaagtagatgga
gaaatagaggctgtcctgctaaagaaagctaaagccagggggctagaattgcagatctcc
aaggtgaagtttgaagatgttggaggcaatgatacgacattaaaagaggtctgcaagatg
ctcatacacatgcgtcacccagaggtgtaccaccacctgggcgtcatacccccacgcgga
gttcttcttcatggaccaccgggctgtgggaagacgttgcttgcacatgcaattgctggg
gaacttgaccttccaatattgaaagtagctgctacagagattgtatctggagtatctgga
gaatcggaacagaagctgagagagctatttgaacaagctgtgtcaaatgcaccatgtatc
ctttttattgatgaaattgatgctattacccccaaaagagaagttgcttcaaaagatatg
gaacgaagaattgtagcccagctcctaacctgcatggacgatctgaatgacatggccgct
acagctcgggtgctagtcatcggagctactaaccgaccagactccttagaccctgctttg
agacgtgcaggaaggttcgaccgagagatatgcctaggtatcccagatgaagcatccagg
gaaagaatacttcaaactttgtgcagaaaagtaagacttcccgaaacttttcattttcgt
cacttagcacacctaacgccgggcttcgttggtgctgacctgatggcactctgccgagag
gcagccatgtgtgcagtcaacagggtcttaatgaagctgcaggagcagcagcagaagaat
cctgagattgaaggtttgccctctgaaggaggccaggaagaaaggattggaactgagccc
acttctaaaacacaggatgaattgcaaagcctcttggggttgctgaggaaccaagatccc
ctctcagaggagcagctgcaagggctgtgccttgagttgaatgatttcattgttgctcta
tcctctgtccaaccctctgctaaaagggaaggctttgtcactgtcccaaatgtgacatgg
gcagatattggtgccctggaagacattagagaggagctcaccatggcaatattggcacca
gtacgtaacccagatcagttcaaagctcttgggttggagactccagctggagttctcctt
gctggtccccctggctgtgggaaaactctgctggcaaaggctgttgcaaatgagtctggg
ttaaattttatatctgtcaaagggcctgagttactaaatatgtatgttggtgaaagcgag
cgtgctgtgcgacaggtttttcagcgagccaagaattcagcaccctgcgtgatattcttt
gatgaagtggatgccttatgtcctcgaagatcagtccgagagacaggggcaagtgtccgg
gtggtaaatcagctacttacagagatggatggtctggaaacacgtcagcaggtttttatt
atggcagccactaacagaccagatatcattgaccctgcaatcctgcgcccaggccgcctg
gacaaaacactctttgtgggtttgccacccccagcagatcgtcttgccatcttaaaaact
atcacaaaaaatggcaccaaacccccactggatgcagatgtaaatttggaagcagttgct
ggtgaccttcgctgtgattgctatacgggtgcagatctctctgctttggtacgggaggct
tctatctgtgccttgaagcaggaaatggcaagacagaagagtggaagtgaaaaaggtgaa
ctcaaggttagtcagaagcactttgaagaagctttcaagaaagtaaagtcatctgtatca
aaagaggatcaagcaatgtatgaagctctgcagtggtccctcagccggtga
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