KEGG   Globicephala melas (long-finned pilot whale): 115859781
Entry
115859781         CDS       T11080                                 
Symbol
BCAS2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115859781 (BCAS2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:gmf03041]
    115859781 (BCAS2)
   03400 DNA repair and recombination proteins [BR:gmf03400]
    115859781 (BCAS2)
Spliceosome [BR:gmf03041]
 Complex B
  Other components
   Prp19 complex
    115859781 (BCAS2)
 Complex C
   Prp19-CDC5 complex
    115859781 (BCAS2)
DNA repair and recombination proteins [BR:gmf03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    115859781 (BCAS2)
SSDB
Motif
Pfam: BCAS2 HAUS2 THOC7 Tup_N Transcrip_act OmpH Ribosomal_L29 INO80F Relaxase_C Beta-prop_NUP159_NUP214 DUF3450 PRKG1_interact
Other DBs
NCBI-GeneID: 115859781
NCBI-ProteinID: XP_030724981
LinkDB
Position
1:87385465..87401079
AA seq 225 aa
MAGTGLVAGEVVVDALPYFDQGYEAPGVREAAAALVEEETRRYRPTKNYLSYLTAPDYSA
FETDIMRNEFERLAARQPIELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMSQHGCNAWKVYNENLVHMIEHAQKELQKLRKHIQDLNWQRKNMQLTAGSKLRE
MESTWVSLVSKNYEIERTIVQLENELFQMKQQHGEANKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atggcgggtacgggtttggtggccggagaggttgtggtggatgcgctgccgtattttgac
caaggttatgaagcgcctggtgtgcgggaagcggctgcggcattggtggaggaggaaaca
cgcagataccgacctaccaagaactacctgagctacctgacagccccggattattccgct
tttgaaaccgacataatgagaaatgaatttgaaagattggctgctcgacaaccaattgaa
ttgctcagtatgaaacgatatgaacttccagccccttcctcgggtcagaaaaatgacatt
actgcgtggcaagaatgcgtaaacaattctatggcccagttagagcatcaagcggttcga
attgagaatctggaactaatgtcacagcatggatgcaatgcctggaaagtgtataatgaa
aatctagttcatatgattgaacatgcacagaaagagctccagaagttaaggaaacatatt
caagacttaaactggcagcgaaagaacatgcagctcacagctggatctaaattaagagaa
atggagtcaacttgggtatccctggtcagtaagaattatgagattgaaaggactattgta
caattagaaaatgaactctttcaaatgaagcagcaacatggagaggcaaacaaagaaaac
atacggcaagacttctga

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