Globicephala melas (long-finned pilot whale): 115859815
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Entry
115859815 CDS
T11080
Symbol
TTF2
Name
(RefSeq) transcription termination factor 2
KO
K15173
transcription termination factor 2 [EC:5.6.2.-]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04918
Thyroid hormone synthesis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09152 Endocrine system
04918 Thyroid hormone synthesis
115859815 (TTF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmf03021
]
115859815 (TTF2)
Transcription machinery [BR:
gmf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115859815 (TTF2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Zn_ribbon_GRF
DEAD
AAA_34
Motif
Other DBs
NCBI-GeneID:
115859815
NCBI-ProteinID:
XP_030725048
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All DBs
Position
1:complement(85002502..85060372)
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AA seq
1166 aa
AA seq
DB search
MEVVGCPQHGTLCFLKTGVRDGPNKGKSFYVCPADTGSFVGATDIPVSHCLLHEDFAVEL
QGLFLSQGKKEYRLFFRCVRSKAEGKQWCGNIPWQDPNSEEHSVTSKSQHASEISRYPSS
QQRNPFKVIDKNQEPSLWKQFIKGEDEEKTADKKQREKRDPLLDQKKEQKPESKCWMEED
LSSGLVVKEKQSAVQEMQRGEKTEFRSAAKEVEGVHKRNLFEMKSKQVRGNELREPSASQ
EKSNGERHSLQKESEPPREKETKPLPRIVHSQHPISQSLKGGHLSKEHPKSWEARETKAK
KDASTQTLQKSLLQGHLRAQPETQGTPAPKGPAAQPAPLAAGHPQGEMRDADTSSGDSEE
GDVDFVSSKPGSPLLFDLTLDSQKKKNLKFPGQSVQRKISPDSGVSKKGEPSDPEAQRVY
LTTQLKQKKSTLASVNIQALPDKGQKLFKQLQELEDALSALALSPEQGTNEKSNTQVPQQ
SNFTKTTTDPPHLVPPKPLQGQDLQPLGCLGLKAARQEAAGGSDQCCGGPMSQGRLRAVW
QITSEAIDELHRSLESRPGETAVAEDPAGLKIPLLPHQKQALAWLLWREGQKPRGGILAD
DMGLGKTLTMIALILTQKNQEKNKEKDKTTALAWLSKNDSSEFTSHGTLVICPASLIHHW
KSEVEKRVSSNKLRVYLYHGPNRDQHAKVLSTYDIVVTTYSLLAKEIPTKKEEGEMPGAN
LSVKGVSSPLLRVVWARIILDEAHNVKNPRVQTSLAVCKLQAQARWAVTGTPIQNNLLDM
YSLLKFLRCSPFDELSLWRSQVDNGSKKGEERLNILTKSLLLRRTKDQLDPTGKPLVVLP
QRKFQLHHLKLSEDEENVYSVLFARSRSALQSYLKRHESGGSQSGRSSDNAFSRVAQEFG
SSGPGLSVAADSQTSSTAHILSQLLRLRQCCCHLSLLKSALDLKELKSEGLVLSLEEQLR
DLTLSEFHNSEPSASISLNGKCFNVELFDDRRESTKISSLLAELEAIRRNSGSQKSVIVS
QWTSMLKVVTLHLKRHGLTYSTIDGSVNPKQRMDLVEAFNKSRGPQVMLISLLAGGVGLN
LTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEKKRDL
AKQILSGTGEVVTKLTLADLKVLFGI
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggttgggtgtccacagcacgggaccttatgttttctgaagaccggcgtccga
gatggcccgaataaaggaaagagcttctacgtgtgcccggcggacacaggcagcttcgtg
ggggccaccgacattcctgtttctcattgtttattgcatgaggactttgcggtagagctt
cagggtctgtttctatcacagggcaagaaagaatacaggttattcttccgatgtgttaga
agtaaggcagaggggaagcaatggtgtggaaatatcccatggcaggatcctaattccgaa
gaacattctgtaaccagtaagtctcagcatgcctctgagatatctcgttatccttccagc
cagcagagaaacccgttcaaggtaattgacaagaatcaagaaccatccctctggaagcag
ttcatcaaaggtgaagatgaggaaaagacagctgataagaagcaaagggaaaagagagat
ccactcctggatcaaaagaaggaacagaagcctgaatctaagtgctggatggaggaagat
ctctcatctggcctggtggtaaaggaaaaacaatcggctgttcaagagatgcagcgaggg
gagaagacagagtttcgtagtgctgcaaaggaggttgaaggggtgcacaaaagaaaccta
tttgagatgaaatccaaacaggtccgtgggaatgagctgagagaaccgtctgcatctcag
gagaagtcaaatggtgagaggcattctctccaaaaagaatcagaacctccaagggaaaag
gaaactaagcctttgcctcgaattgttcacagtcaacacccaataagccagtccctgaaa
gggggacacctcagcaaggagcaccccaagagctgggaggctagagaaacaaaggcaaag
aaggacgcaagcacgcagactctccagaaaagtctgctccagggccatttgcgggcacag
ccggagacccagggcacgcctgctccaaagggaccggctgctcagcctgcaccgctggcc
gcagggcacccccagggagagatgcgagacgccgatacaagcagtggtgacagtgaggaa
ggtgatgttgattttgtttcctctaagccagggagccccttgctctttgacttgactcta
gactcacagaagaagaagaaccttaaattccctggtcagagtgtgcaaagaaaaatttct
cctgactcaggcgtttccaagaagggagaaccttcagacccagaagcccaacgtgtgtac
ctcacaacacagctgaaacaaaagaagagcacactggcatctgtgaacatccaggctctt
ccagacaagggtcagaagttgttcaagcaacttcaggagctggaggatgcgctgagtgcc
ctggccctctccccagagcaaggcactaatgagaagagtaacactcaagtaccacagcag
agtaacttcaccaaaacgaccactgatcctccccacttggtgcctcccaaacccctgcag
ggccaggatctccagcctctgggttgtctaggactgaaggctgcccgccaggaggctgct
ggagggtctgatcagtgctgtggaggccctatgagccaaggtcgccttcgcgcagtgtgg
caaatcacaagtgaagccattgatgagctgcatcgatcacttgagtcacgtcctggcgag
acagctgtagcagaggatccagctgggttgaagatccctttgttgccgcaccagaagcag
gcattagcctggctgctatggcgggaaggtcagaagccacgaggaggaatcctggcggat
gatatggggttaggaaaaaccctcacaatgattgcactcatcctgacccagaagaaccaa
gagaaaaacaaagaaaaggacaaaaccacggctttggcttggctttccaaaaatgactcc
tctgagttcacttcccatggaacactagtcatctgtcctgcttccctgatccatcattgg
aaaagtgaggtggagaaacgtgtgagcagcaacaaactaagagtctatctgtatcatggg
ccaaaccgggatcaacatgcaaaagtcctctccacatatgacatcgtggtcactacctac
agccttctggccaaggagattcccacaaagaaggaagagggagagatgccaggtgcaaac
ctcagtgtgaagggtgtctcatcacctttgcttcgagtagtctgggctcgaatcatattg
gatgaagctcacaatgttaagaatccccgagtgcagacttccttggctgtgtgtaagctc
caggcccaagcccgttgggctgtcactggaacccccattcagaacaacttgttggacatg
tattcactgctgaaatttctccgttgttctccatttgatgaactcagtctgtggaggagt
caggttgacaatggttcaaagaaaggagaagaacggttaaatattttaaccaagagcctt
ttgctgaggagaacaaaagaccagctggaccccaccggcaagcccttggtggtgctcccc
cagcgtaaatttcagttgcaccatttaaagctttctgaagatgaagaaaatgtttatagt
gtcctttttgcaagatcaaggtcagctctgcaatcctatctaaaaagacatgaaagtggg
ggcagccaatctggaagaagctctgataatgcattcagtagagtggcccaggagtttggg
tccagtgggcctgggctctccgtggcagcagactcgcagacatctagcaccgcccatata
ctgtcacagttgctgagactccgccagtgttgttgtcatctttctctactgaagtcggcc
ctggatctgaaagagctgaagagtgaaggcctggtcctttccctggaagagcagctcaga
gacttgaccttgtccgaattccataactcagagccgtctgcctccatttcccttaatggc
aaatgcttcaatgtggagctttttgacgacaggagagagagcaccaagatttcatctctg
ttggcagaattggaggcaatccgaagaaattcagggtcccaaaagagtgtcatcgtctct
cagtggaccagcatgctgaaggttgtaaccttgcaccttaagaggcatggactgacttat
tccaccatcgatggctctgttaaccccaaacagagaatggacttggtggaggcatttaac
aaatccaggggccctcaggttatgctaatctctctcttggctggaggtgttggtctaaac
ctgactggaggaaaccatcttttccttctggacatgcactggaatccgtcacttgaagat
caagcttgtgaccgaatttaccgagtagggcagcagaaagatgttgtcatacacagattt
gtttgtgagggaacagtggaagagaagatcttgcagctccaagaaaaaaagagagatttg
gccaaacagattctatcaggaactggagaagttgtcaccaagctcaccttggccgatctc
aaagtcctttttggcatctaa
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