Globicephala melas (long-finned pilot whale): 115859889
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Entry
115859889 CDS
T11080
Symbol
ABCA4
Name
(RefSeq) retinal-specific phospholipid-transporting ATPase ABCA4
KO
K05644
ATP-binding cassette, subfamily A (ABC1), member 4
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
115859889 (ABCA4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmf02000
]
115859889 (ABCA4)
Transporters [BR:
gmf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
115859889 (ABCA4)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
AAA_15
AAA_23
AAA_22
SRP54
AAA_29
Motif
Other DBs
NCBI-GeneID:
115859889
NCBI-ProteinID:
XP_060158598
LinkDB
All DBs
Position
1:105404427..105543182
Genome browser
AA seq
2275 aa
AA seq
DB search
MGFARQIKLLLWKNWTLRKRQKIRFVVELVWPLSLFLVLTWLRNVNPLYGQHECHFPNKA
MPSAGMLPWLQGIFCNVNNPCFQSPTPGESPGIVSNYNNSILARVYQDFQELLMGAPESQ
HLGQVWTELCTLSQLMNTLRAHPERIAGRGIRIRDVLKDEETLSLFLIKSIGLSDSVVYL
LVNSQVRPEQFAHGVPDLVLKDIACSEALLERFLIFPQRRAAQTVRDVLCSLSQGTLQWM
EDTLYANVDFFKLFHVLPKLLDSSSQGINLRSWGRILSDMSPRIQEFIHRPSVQDLLWVT
RPLVQTGGPETFTQLMGTLSDLLCGYPEGGGSRVFSFNWYEDNNYKAFLGIDSTRKDPIY
SYDKRTTTFCNALIQSLESNPLTKIAWRAAKPLLMGKILFTPDSPAIRRILKNANSTFEE
LERFRKLVKVWEEVGPQIWYFFDKSMQMTMIRDTLENPTVKASWNRQLGEEGITAEAVLN
FLYRGPREGQADDMDIFDWRDIFNITDRTLRLANQYLECLILDKFESYDDEFQLTQRALS
LLEENRFWAGVVFPDMYPWTSSLPPHVKYKIRMDIDVVEKTNKIKDRYWDSGPRADPVED
FRYIWGGFAYLQDMVEQGITRSQAQVEVPVGIYLQQMPYPCFVDDSFMIILNRCFPIFMV
LAWIYSVSMTVKSIVLEKELRLKETLKNQGVSNTVIWCTWFLDSFSIMSMSICLLTIFIM
HGRILHYSNPFILFLFLLAFSTATIMQCFLLSTFFSRASLAAACSGVIYFTLYLPHILCF
AWQDRMTADLKLAVSLLSPVAFGFGTEYLARFEEQGLGLQWNNIGNSPVEGDEFSFLMSM
KMMLIDAVLYGLLAWYLDQVFPGDYGTPLPWYFLLQESYWQGGEGCSTREERALEKTEPV
TEEMEDPEHPEGINDCFFERELPGLVPGVCVKNLVKIFEHHGRPAVDRLNITFYENQITA
FLGHNGAGKTTTLSILTGLLPPTSGTVLIRGKDIETSLDAIRQSLGMCPQHNILFHHLTV
AEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEAQDLSGGMQRKLSVAIAFVGDA
KVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADILGDRIAIIARGRLYC
SGTPLFLKNCFGTGFYLTLVRKMKTIQGQGGGCKGTCSCASKGFSIRCPSCVDEITPEQV
LDGDVNELMDMVCHHVPEAKLVECVGQELIFLLPNKNFKQRAYASLFRELEETLGDLGLS
SFGISDTPLEEIFLKVTEDCESRPLFAGGTQQKRENISLQHPCLGSSSKARQTPQGSDGH
PTEPAAPPEQDGHSQLNTGVQLALQHVQALLVKRFHHTVRSYKDFLAQIVLPATFVFLAL
MLSIIIPPFGEYPALTLHPWIYGQQYTFFSMDQPDSERLMVLADVLVNKPGFGNRCLKEE
WLPEFPCGNSTPWKTPSVSPDVSHLLQKQIWTADHPSPSCRCSTREKLTMLPECPEGAGG
LPPPQRIQRSTEILQDLTDRNISDFLVKTYPALIRSSLKSKYWVNEQRYGGISIGGKLPA
PPVTGEALVGFLSDLGQLMNVSGGPLTREASKEMSAFLKHLETEDNIKVWFNNKGWHALV
SFLNVAHNAILRASLLEDRNPEEYGITVVSQPLNLTKEQLSEITVLTTSVDAVVAICVIF
AMSFVPASFVLYLIQERVNKAKHLQFVSGVSPTIYWLTNFLWDIMNYTVSAALVVGIFIG
FQKKAYTSSDNLPALVALLMLYGWAVIPMMYPASFLFDVPSTAYVALSCANLFIGINSSA
ITFILELFENNQTLLRLSAVLRKLLVIFPHFCLGRGLIDLALSQAVTDVYARFGEEHSSN
LFQWDLIGKNLVAMAVEGLVYFLLTLLIQYQFFFSLWTAEPAKEPIIDEDDDVAEERQRI
ISGGNKTDILRLNELTKIYSGSSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGD
STVTSGDATVAGKSILTNISDVHQSMGYCPQFDAIDDQLTGREHLYLYARLRGVPAENIK
RVTDWSIKSLGLSLYADRLAGTYSAGNKRKLSTAIALIGCPLLVLLDEPTTGMDPQARRM
LWNTIMSIIREGRAVVLTSHSMEECEALCTRLAIMAKGTFQCLGTIQHLKYKFGDGYIVT
MKIKSPKDDLLPDLGPVEQFFQGNFPGSVQRERHYNMLQFQVSSSSLARIFRLLVSHKDS
LLIEEYSVTQTTLDQVFVNFAKQQTETHDFPLHPRAAGASRQAKEVDKGNSAPQG
NT seq
6828 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccagacagatcaagcttctgctctggaagaactggaccctgcggaaaagg
caaaagattcgctttgtggtggaacttgtgtggcctttatctttatttctggtcctgacc
tggttaaggaatgtcaacccactctacggccaacatgaatgccattttcccaacaaggcg
atgccctcagcaggaatgttgccatggctccagggaattttctgcaatgtgaacaatcct
tgttttcaaagtcccaccccgggagaatctcctggaattgtgtcaaactataacaactcc
atcttggcaagggtttatcaagattttcaagaactcctcatgggtgcaccagagagccag
cacctcggccaggtttggacagagctctgcaccttgtcacaactcatgaacaccctccgg
gcgcaccccgagaggattgcaggaagaggaatacgaatacgggatgtcctaaaggatgag
gaaacactgtcactgtttctcataaagagcattggcctgtctgactcagttgtctacctt
ctggtcaactcccaagtccgtccagagcagtttgctcatggagtcccagacctagtgctg
aaggacatcgcctgcagtgaggccctcctggagcgcttcctaatcttcccccagcgccgt
gcggcgcagacagtgcgtgatgtgttgtgctccctctcccagggcaccctacagtggatg
gaggacaccctgtacgccaacgtggacttcttcaagctcttccatgtgcttcccaaactc
ctggacagcagttctcaaggtatcaatctgagatcgtggggaagaatattatctgatatg
tcgccaagaattcaagaattcatccaccgaccaagtgttcaagacttgctgtgggtgacc
aggccactcgtgcagactggaggtccagagacgttcacacagctgatgggcaccctgtct
gacctcttgtgtggctacccagagggaggaggctctcgggtgttctccttcaactggtac
gaagacaataactataaagccttcctggggattgactccacaaggaaagatcctatctat
tcttatgacaaaagaacaacaaccttttgtaatgcattgatccagagcctggagtcaaac
cctctaaccaaaatagcctggagggcagcaaagcctttgctgatgggaaaaatcctcttt
actccggattcccccgcaatacgcaggatactgaagaacgccaactcgacgtttgaagag
ctggagcgtttcaggaagttggtcaaagtctgggaagaagtagggccccagatctggtac
ttctttgacaagagcatgcagatgaccatgatcagagacaccctggagaacccaacagta
aaagcctcttggaataggcagcttggtgaagaaggtattactgccgaagccgtactgaac
ttcctctataggggcccacgagagggccaggctgatgatatggacatcttcgactggagg
gatatatttaacatcactgatcgcacactacgcctggctaatcaatacctggagtgcttg
atcctggataagtttgaaagctacgatgatgaatttcaactcacccaacgagccctgtct
ctgctggaggaaaacaggttctgggctggtgtggtattccctgacatgtatccctggacc
agctccctaccaccccatgtgaagtacaagatccgaatggacatagatgtggtggagaaa
accaataagatcaaagacagatactgggattctggccccagagctgatcctgtggaagac
ttccgatacatctggggcgggtttgcctatctgcaggacatggttgaacaggggatcaca
aggagtcaggcccaggttgaggttccagttggaatctacctccagcagatgccttacccc
tgcttcgtggatgactcttttatgatcatcctgaaccgctgtttccctatcttcatggtg
ctggcctggatctactctgtctccatgactgtaaagagcatcgtcttggagaaggagttg
agactgaaggagaccttgaaaaatcagggtgtctccaacacagtgatttggtgtacctgg
ttcctggacagcttctctatcatgtcgatgagcatctgtctcctgacgatattcatcatg
catggaaggatcctgcattatagcaatccattcatcctcttcctattcctgttggctttc
tccactgctacaatcatgcagtgcttcctgctcagcaccttcttctccagggccagcctg
gcagcagcctgtagtggtgtcatctacttcaccctctacctgccacacattctctgcttt
gcttggcaggaccggatgacggccgacctgaagctggctgtgagcctgctgtctcctgtg
gcatttgggtttggtactgagtacctggctcgctttgaagagcaaggcctggggctacag
tggaacaatattgggaatagtcccgtggaaggggatgaattcagttttctgatgtccatg
aagatgatgcttattgatgctgttctgtatggcttgcttgcctggtatcttgaccaggtg
tttccaggggactatggaaccccacttccttggtacttccttctacaagagtcttattgg
caaggtggtgaagggtgttcaaccagagaagaaagggccttggaaaagacggaacccgta
acagaggaaatggaggacccagaacacccagaaggaataaatgactgcttctttgaacgt
gagctcccaggcttggttcccggggtgtgtgtgaagaatctggtaaagatttttgagcac
catggcaggccagctgtggaccgtcttaacattaccttctatgaaaaccagatcaccgcg
tttctcggtcacaatggagcagggaaaaccacgaccttgtccatcctgacgggtctgttg
ccaccgacatccgggactgtgctcattaggggaaaggacattgaaaccagcctggatgct
atccggcagagccttggcatgtgtccacagcacaacatcctgttccaccatctcacagtg
gctgaacacatcctattctacgcgcagctgaaagggaggtcctgggaggaggcccagctg
gagatggaagccatgctggaggacacaggcctccaccacaagaggaacgaagaagcgcag
gatctctcaggtggcatgcagaggaagctgtccgttgccattgccttcgtgggagatgcc
aaggtggtggttctggatgagcccacctctggggtggatccctactcgaggcgctccatc
tgggacctgctcctgaaataccgctcaggcagaaccatcatcatgtccactcaccacatg
gacgaggccgacatcctcggggaccgcatcgccatcatagcccggggacgactctactgc
tccggcacaccgctcttcctaaagaactgctttggcacaggcttctacttaaccttggtg
cgcaagatgaagaccatccagggccaaggaggaggctgtaaggggacctgcagctgtgcg
tctaagggtttctccatcaggtgtccatcctgcgtcgatgagataactccagaacaagtc
ttggacggggatgtgaatgagctgatggatatggtttgccaccatgttccggaggcgaag
ctggtggaatgtgttggtcaagagctcatcttccttcttccaaataagaatttcaagcag
agggcatacgccagccttttcagagagctggaggagaccctgggtgacctggggctcagc
agttttggaatttctgacactcccctggaagagatttttctgaaggtcacggaggattgt
gagtcaagacctctgtttgctggcggcactcagcagaaaagagaaaacatcagtcttcaa
cacccctgtttgggttctagcagcaaggccagacagactccacagggctccgacggccac
cccacggagcccgctgctcccccggagcaggatgggcacagccaacttaacacgggagtg
cagctggccctccagcacgtgcaggcgctgctggtcaagcggttccaccacactgtccgc
agctacaaagacttcctggcccagattgtgctcccggccacttttgtgtttctggctctg
atgctttccatcatcatccctccttttggcgaatatcctgctttgacccttcacccctgg
atatatgggcagcagtataccttcttcagcatggaccagccggacagtgagcggctcatg
gtacttgcagacgtcctcgtgaataagccaggctttggcaaccgctgcctgaaggaagag
tggcttccggagttcccctgtggcaattcaaccccctggaagactccctctgtgtccccg
gatgtcagccacctgctccagaagcagatatggacagcagaccacccctcgccttcctgc
aggtgcagcaccagagagaagctcaccatgctccccgagtgccctgagggcgcagggggg
ctcccaccccctcagagaatacagcgcagcactgaaattctacaagaccttacagatagg
aacatctccgacttcttggtaaaaacgtatcctgctcttatacgaagcagtttgaagagc
aaatactgggtcaatgaacagaggtacggaggaatttccattggaggaaagctcccggct
ccccccgtcactggagaagcccttgttggatttttaagtgaccttggccagttaatgaat
gtgagcgggggccctctcaccagagaagcctctaaagagatgtctgctttccttaaacat
ctagaaactgaagacaacattaaggtgtggtttaacaacaaaggctggcatgccctggtc
agcttcctcaacgtggcccacaacgccatcttacgggccagcctgctcgaggacaggaac
cccgaggagtatggcatcaccgttgtaagccagcctctgaacctgaccaaggagcagctc
tccgaaattacagtgctgaccacttctgtggatgctgtggtggccatctgtgtgattttt
gccatgtccttcgtccctgccagctttgtcctttacttgatccaggagagggtgaacaaa
gctaagcacctccagtttgtcagtggagtgagccccaccatctactggctgaccaacttc
ctctgggacatcatgaattacactgtgagcgctgcactggtggtgggcatcttcatcggg
tttcagaagaaagcctacacttcttcagacaatcttccagccctggtcgcactgctcatg
ctgtacggatgggcagtcattcccatgatgtacccagcatccttcctatttgatgtccca
agcacagcctatgtggccttatcttgtgctaatctgttcatcggcatcaacagcagtgct
atcaccttcatcttggaattatttgagaataaccagacactgctcaggctcagtgccgtg
ctgaggaagctgctcgttatcttcccccacttctgcctgggccggggcctcattgacctg
gcactgagccaggctgtgacagacgtctatgcccggtttggtgaggagcactcttcaaat
ctgttccagtgggacctgattgggaagaacctggttgccatggcagtagaagggttggtg
tacttcctcctgaccctcctcatccagtaccaattcttcttcagcctatggactgccgag
cctgctaaggagcctatcatagatgaagatgatgatgtggctgaagaaagacaaagaatt
attagtggaggaaataaaactgatatcttgaggctaaatgaactaaccaagatttattca
ggcagctccagcccagcggtggacaggctgtgtgtgggagtccgccccggagagtgcttt
ggcctcctgggagtgaatggagctggcaaaacaaccacattcaagatgctcactggggac
agcacagtgacgtcaggtgatgccaccgtcgcaggcaagagtattttaaccaatatttct
gacgtccatcaaagtatgggctactgtcctcagtttgatgcaatcgatgaccagcttaca
gggcgagaacatctttacctttatgcccggcttcgaggtgtaccagcagagaacatcaag
agggtgacagactggagtattaagagcctgggcctgtctctctacgcagaccgcctggcc
ggcacctacagtgcaggcaataagcggaaactctccacagccattgcactcataggctgc
ccactgctggtgctactggatgagcccaccacaggcatggacccccaggcacgccgcatg
ctgtggaacaccatcatgagcatcatcagagaagggagagccgtggtcctcacttcccac
agcatggaggagtgcgaggcgctgtgtacccggcttgccatcatggcgaagggcaccttt
cagtgtctgggcaccattcagcacctcaagtacaagtttggagatggctacatcgtcaca
atgaaaatcaaatccccgaaagacgacttgcttcccgacctgggtcctgtggagcagttc
ttccaggggaacttcccaggcagcgtgcagagggagaggcactacaacatgctgcagttc
caggtctcctcctcctccctggccaggatcttccggctgctcgtctcccacaaggacagc
ctgctcatcgaggagtactcagtcacacagaccacgttggaccaggtgtttgtgaacttt
gctaagcagcagactgaaactcatgacttccctttgcaccctcgagctgctggagccagt
cgacaggccaaggaagtggacaaagggaattctgcacctcaaggatga
DBGET
integrated database retrieval system
