Globicephala melas (long-finned pilot whale): 115859915
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Entry
115859915 CDS
T11080
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03040
Spliceosome
gmf05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115859915
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
115859915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115859915
03041 Spliceosome [BR:
gmf03041
]
115859915
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115859915
mRNA cycle factors
Common to processing body (P body) and stress granule
115859915
Spliceosome [BR:
gmf03041
]
Common components
Common spliceosomal components
hnRNP proteins
115859915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HnRNPA1_LC
RRM_7
RRM_PARP14_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
115859915
NCBI-ProteinID:
XP_069901197
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All DBs
Position
1:complement(82082300..82083745)
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AA seq
340 aa
AA seq
DB search
MNSKRDKHEAVKLDIKIIKCGGGDQSPKEPEQLQKLFIGGLSFETTDESLRSHFEQWGTL
TDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKGAISREDSQRPGA
HLTVRKIFIGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVD
KIVFQKYHTVNGHNCEVRKALSKQEMASASSSQRGQSGSGNFGGGRGGGFGGNDNFGHGG
NFSGRGGFGGSHGGGGYGGSGDGYNGFGNDGSNFGGGGSYNDFGSYNNQSSNFGPMKGGN
FGGRSSGPYGGGGQYFAKPQNQGGYGGSSTSSSYGSGRRF
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaaaagggataaacatgaagctgtaaaattggacatcaaaatcataaaatgt
gggggaggagatcagtcacccaaagagcccgaacagctgcagaagctcttcatcggaggt
ttgagctttgaaacaaccgatgagagtctgaggagccattttgagcagtggggaacgctc
acagattgtgtggtaatgagggatccaaacaccaaacgctccagaggcttcgggtttgtc
acatatgccactgtggaggaggtggatgcggccatgaatgcaaggccacacaaggtggat
ggaagagttgtggaaccaaagggggccatctcaagagaagattctcaaagacctggtgcc
cacttaactgtgagaaagatttttattggtggtattaaagaagacactgaagaacatcat
ctaagagattattttgaacagtatgggaaaattgaagtgattgaaatcatgactgatcga
ggcagtggcaaaaagagaggctttgctttcgtaacctttgatgaccatgactctgtagac
aagattgtctttcagaaataccacactgtgaacggccacaactgtgaagtaaggaaagcc
ctatctaaacaagagatggctagtgcctcatccagccaaagaggtcaaagtggttctgga
aactttggtggtggtcgtggaggtggttttggtgggaatgacaactttggtcatggagga
aacttcagtggtcgaggtggctttggtggtagccatggtggtggtggatatggtggcagt
ggggatggctataatggatttggtaatgatggaagtaattttggaggtggtggaagctac
aatgattttggcagttacaacaatcaatcttcaaattttggacccatgaaaggaggaaac
tttggaggcagaagttctggcccctatggtggtggaggccaatactttgccaaaccccaa
aaccaaggtggctatggtggttccagcaccagcagtagctatggaagtggcagaaggttt
tga
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