Globicephala melas (long-finned pilot whale): 115860159
Help
Entry
115860159 CDS
T11080
Name
(RefSeq) organic cation/carnitine transporter 2 isoform X2
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
115860159
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmf02000
]
115860159
Transporters [BR:
gmf02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
115860159
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
115860159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
115860159
NCBI-ProteinID:
XP_030725536
LinkDB
All DBs
Position
3:109360058..109385467
Genome browser
AA seq
557 aa
AA seq
DB search
MRDYDEVTAFLGEWGPFQRLIFFLLSASIVPNGFNGLSSVFLSATPEHHCRVPDTANLSS
VWRNHSLPLQLQDGREVLHRCRRYRLATIVNFSALGLEPGRDVDLEQLEQEGCLDGWEFN
RDIYLSTIVTEWNLVCEDDWKAPLTVSLFFGGVLVGSFISGQLSDRFGRKNVLFVTMGMQ
TGFSFLQIFSKNFEMFAMLFFLVGVGQISNYVAAFVLGTEILGKSVRIIFSTLGVCIFYA
FGYMLLPLFAHFIRDWRMLLLALTVPGVLCFPLWWFIPESPRWLISQGRFKEAEVIIRRA
AKINGIIAPSTIFDSSELQDLSSKKQQSHSILDLLRTQNIRMVTIMSIILWMTISVGYFG
LSLDTPNLHGNVYLNCFLSAVVEVPAYVLAWLLLQHLPRRYSMATALFLGGSVLLFVQLV
PPDLYYLATILVMVGKFGVTAAFSMVYVYTAELYPTVVRNMGVGVSSTASRLGSILSPYF
IYLGAYDRFLPYILMGSLTILTAILTLFLPESFGTPLPDTIDQMLRVKGIKYRQTPSHTR
MLKDGEEGPTVLKNTGF
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcgggactacgacgaggtgaccgccttcctgggcgagtggggccctttccagcgcctc
atcttcttcttgctcagcgccagcatcgtccccaacggcttcaacggtctgtcgtccgtg
ttcctgtcggcgaccccggagcaccactgtcgggtgccggacacagcgaacctgagcagc
gtgtggcgcaaccacagcctcccgctgcagctgcaggacggccgcgaggtgcttcacagg
tgccgccgctaccggctcgcgacgatcgtcaacttctcggcgctcgggctggagccgggg
cgcgacgtggacctggagcagctggagcaagagggctgcctggatggctgggagttcaac
cgggacatctacctgtccaccatcgtgaccgagtggaacctggtgtgtgaggacgactgg
aaggccccgctcacggtctccttgtttttcgggggtgtgctggtgggctccttcatttcg
gggcagctctcagacaggtttggtcggaagaatgtgctgtttgtgacaatgggcatgcag
actggcttcagcttcctgcagatcttctcgaagaactttgagatgtttgccatgctgttt
ttccttgtaggcgtgggccagatctccaactacgtggcagcatttgtcctgggaacagaa
attcttggcaagtcagttcgtattatattctctacgttaggcgtgtgcatattttatgca
tttggctacatgctgctgccgctatttgctcacttcatcagagactggcggatgcttctg
ctggcgctgacggtgccgggggtgctgtgcttcccactgtggtggttcatccctgagtcc
ccccgatggctcatctctcaaggccgatttaaagaggcagaggtgatcatccgcagggct
gccaaaatcaatgggatcattgcaccctcaaccatctttgactcaagtgagctacaagac
ctaagctccaagaaacagcagtctcacagcattctggatctgctccgaacccagaatatc
cggatggtcaccatcatgtccataattctgtggatgaccatatcagtgggctattttggg
ctttcccttgacactcctaacttgcatgggaatgtctatttgaactgcttcctctcggct
gtggttgaagtcccagcatatgtgttggcctggctgctcctgcagcacctgccccgacgc
tattccatggccaccgccctcttcctgggtggcagcgttcttctcttcgtgcagctggtg
cccccagacttgtattatttggctaccatcctggtgatggtgggtaagtttggagtcact
gctgccttctccatggtctacgtgtacacagccgagctgtaccccacagtggtcaggaac
atgggcgtgggagtcagttccacggcatcccgcctgggcagcatcctgtctccctacttc
atttaccttggtgcttacgaccgcttcctgccctacattctcatggggagtctgaccatc
ctgacagccatcctcaccttgttcctcccagagagcttcggcaccccactcccagacacc
attgaccagatgctaagggtcaaaggaataaaatacaggcaaactccaagccacacaagg
atgttaaaagatggtgaagaaggccccacagtccttaaaaacacaggcttctaa
DBGET
integrated database retrieval system
