Globicephala melas (long-finned pilot whale): 115860161
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Entry
115860161 CDS
T11080
Symbol
SLC22A4
Name
(RefSeq) solute carrier family 22 member 4
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf05231
Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09160 Human Diseases
09161 Cancer: overview
05231 Choline metabolism in cancer
115860161 (SLC22A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmf02000
]
115860161 (SLC22A4)
Transporters [BR:
gmf02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
115860161 (SLC22A4)
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
115860161 (SLC22A4)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sugar_tr
MFS_1
Motif
Other DBs
NCBI-GeneID:
115860161
NCBI-ProteinID:
XP_030725552
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Position
3:109292315..109344672
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AA seq
551 aa
AA seq
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MQDYDEVTAFLGEWGLFQRLIFFLLSASIIPNGFNGMSVVFLAGTPEHHCRVPDTANLSS
VWRNHSLPLQLQDGREVPHSCRRYRLATIVNFSALGLEPGRDVDLEQLEQEGCLDGWEFN
QDIYLSTIVTEWSLVCEDDWKTPLTTSLFFVGVLLGSFVSGQLSDRFGRKTILFATMAVQ
TGFSFLQIFSINWEMFTMLFVIVGMGQISNYVVAFILGTEILGKSVRIIFSTLGVCTFFA
VGYMLLPLFAYFIRDWRMLLLALTVPGVLCFPLWWFIPESPRWLISQRRFREAEDIIQKA
AKMNNVAAPVVVFNPVEEVTPVKQEKVFILDLFRTRNIGTITIMSLLLWMVTSVGYFALS
LNTPNLHGDAYLNCFFSALIEVPAYITAWLLLRTLPRRYVISGVLFLGGGVLLLIQLVPA
DYNFLSIGLAMLGKFGITSAFSMLYVFTAELYPTLVRNMAVGVTSMASRVGSIIAPYFVY
LGAYNRVLPYILMGSLTVLIGIITLLFPESFGMTLPETLEQMQKMKWFRYGKKTKDSMEK
EENPKVLITSF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgcaggactacgacgaggtgactgccttcctgggcgagtgggggctcttccagcgcctc
atcttcttcctgctcagcgccagcatcatccccaacggcttcaacggtatgtcagtcgtg
ttcctggcggggaccccggagcaccactgtcgggtgccggacacagcgaacctgagcagc
gtgtggcgcaaccacagcctcccgctgcagctgcaggacggccgcgaggtgcctcacagc
tgccgccgctaccggctcgcgacgatcgtcaacttctcggcgctcgggctggagccgggg
cgcgacgtggacctggagcagctggagcaagagggctgcctggatggctgggagttcaac
caggacatctacctgtccaccatcgtgaccgagtggagtctggtgtgtgaggatgattgg
aagacgccccttactacctccctgttcttcgtaggcgtgctcctcggctcctttgtgtct
gggcagctgtcagacaggtttggcagaaagaccatcctcttcgcaaccatggctgtgcag
actggcttcagcttcctgcagattttttccatcaactgggagatgttcaccatgttattt
gtcatcgtcggcatgggccagatctccaactatgtggtggccttcatactaggaacagaa
attcttggcaagtcagttcgtattatattctctacgttaggcgtgtgcacattttttgca
gttggctacatgctgctgccgctgtttgcttacttcatcagagactggcggatgcttctg
ctggcgctgacggtgccgggggtgctgtgcttcccgctgtggtggtttattcctgaatct
ccccggtggctgatatcccagagaagatttagagaagctgaagatatcatccaaaaagct
gcaaaaatgaacaatgtagctgccccagtggtggtttttaatcctgtggaggaggtaacc
cccgtgaagcaggagaaagttttcattctggacctgttcaggactcggaatattggcaca
ataacaattatgtccttgctgctatggatggtcacctcagtaggttactttgctctgtct
ctcaacactcctaatttacatggagatgcctacctgaactgtttcttctctgccttgatt
gaagttccagcttacattacagcctggctgctacttcgaaccctacccaggcgttatgtc
atatctggagtactgttcttgggaggaggtgtgcttctcttaattcagctggtgcctgca
gattacaacttcttgtccattggtctggccatgttaggaaaattcgggatcacctctgcc
ttctccatgctgtacgtcttcactgcagagctctacccaaccctggtcaggaacatggct
gtgggggtcacatccatggcctccagagtgggcagcatcattgctccctactttgtttac
cttggtgcttacaacagagttctgccctacatcctcatgggcagcctgactgtcctgatt
ggaatcatcactcttctcttccctgaaagttttggaatgactctaccagagaccttagag
cagatgcagaaaatgaaatggttcagatatggaaaaaaaacaaaagattcaatggagaaa
gaagaaaatcccaaagttctaataacttcattctga
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