Globicephala melas (long-finned pilot whale): 115860208
Help
Entry
115860208 CDS
T11080
Symbol
SNCAIP
Name
(RefSeq) synphilin-1 isoform X2
KO
K04558
synphilin-1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf05012
Parkinson disease
gmf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
115860208 (SNCAIP)
05022 Pathways of neurodegeneration - multiple diseases
115860208 (SNCAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
SNCAIP_SNCA_bd
Ank_4
Ank
Ank_5
Ank_3
Motif
Other DBs
NCBI-GeneID:
115860208
NCBI-ProteinID:
XP_030725655
LinkDB
All DBs
Position
3:100344568..100494769
Genome browser
AA seq
919 aa
AA seq
DB search
MMEAPEYLDLDEIDFSDDISYSVTSLKTIPELCRRCDSQNEDRSVSSSSWNCSVSTLITN
TQKPTGIADVYSKFRPVKRVSPLKHQPETLENNESDDQKNQKAEYQKGGDSDPGPQPEEL
SPRDGESSPPSKSTEPSPLLGELEHYDLDMDEILDVPYIKSSQQLASFAKVTSEKRILGL
CTSINGLSSKACSTGNAENSLSNMTPFCVLSPVKSPHLRKTSSVVRDQQKLSTEESESSP
PLVKCGSAYEPENQSKDFPNKTFSEPHGRKVDKAMPDCQLRAFHLQSSAPDPKLEEQVGG
MNWTSSQGPEERSEYLKKVKSILNIVKEGQISLLPHLAADNLDKIHDESGNNLLHIAAAQ
GHAECLQHLTSLMGEDCLNERNVEKLTPAGLAIKNGQLECVRWMVSETEAIAELSCSKDF
PSLIHYAGCFGQEKILLWLLQFMQEQGISLDEVDQEGNSAVHVASQHGYLGCIQTLVEYG
ANVTMQNHAGEKPSQSAERHGHTLCSRYLVVVETCMSLASQVVKLTKQLKEQTMQRVTLQ
NQLQQLLEAQKSEGKSLLSSPSSPSSPASRKSQWKSPDADDEPIGKSKPGIQEGIQVLGS
LSVSSRARAKAKDEDSDKILRQLLGKDISENVCTQEKLSLEFQDAQASSRNSKKTPLEKR
ELKLARLKQLMQRPLSESDTDSNNSEDPKGTPVRKVDRPRPQPVVESVESMDSAESLHLM
IKKHSLASGRRFPFSIKASKSLECHSPSPTSESSEPDLESQSPGSGTAPPNQPSGELPQP
SPDSTAAQKVATSPKSALKSPSSKRRTSQNLKLRVTFEEPVVQMEQTSLELNGEKDRDKG
RALQRTSASSEPGDQLKRPFGTFRSIMETLSGNQNNNNNYQASNQLKTSTLPLTSLGRKT
ADGKGNPGSSASKGKNKAA
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagcccctgaataccttgatttggatgaaattgacttcagtgatgacatctct
tattcagtcacgtcactcaagaccatcccggaactgtgccgaagatgtgattcgcaaaac
gaagacagatcagtttctagctctagctggaattgcagtgtctcaactcttattacaaac
acacagaagcccacgggaatcgccgacgtatacagtaagttccgcccagtgaagcgagtg
tccccactgaaacatcagccagagactctggagaacaatgaaagtgatgaccaaaagaac
cagaaggcagagtaccagaaagggggtgattctgacccaggcccccaacctgaggagctc
agccccagagatggagagagcagccctccaagtaagagcacggagcccagccccttgctg
ggcgaactggaacattatgacctcgacatggatgagattctggatgtgccttacattaag
tccagtcaacagcttgcctcttttgccaaggtgacttcagaaaaaagaattttgggttta
tgcacaagcatcaatggcctttctagcaaagcctgttctacaggaaatgctgagaactca
ctgtccaacatgacaccattttgtgttctctctcctgtgaaaagccctcacttgagaaaa
acatcctctgtcgtccgtgaccagcagaagctctccactgaagaatccgagagttctcct
cctctggttaaatgtggctctgcatatgagcctgaaaaccagagtaaggacttcccaaat
aagacctttagtgagcctcatggtcggaaagttgacaaggccatgccagactgccagctc
agggccttccatctgcagtcctcagcaccagaccccaaactagaggagcaggtcggtggc
atgaactggaccagctcccaaggcccagaagaaaggagtgagtacctgaaaaaagtaaaa
agcatcctgaacatcgttaaagaagggcaaatatctctcctgccacacctagctgccgac
aatctagacaaaattcacgatgaaagcggaaacaatctcttacacattgccgcagcgcag
ggacatgcagaatgtctgcagcatctcacgtctttgatgggagaagattgcctcaacgag
cgaaatgtggagaagttgactccagcgggcctggccatcaagaatggtcaattggagtgc
gtacgctggatggtgagtgaaacagaagccattgctgaattgagttgttctaaggatttt
ccaagccttattcattacgcaggttgcttcggccaggaaaagattctgctgtggcttctt
cagttcatgcaagagcagggcatctcactggatgaagtagaccaggaaggcaacagcgcc
gttcatgtggcttcccagcatggctacctcgggtgcatacagaccctggttgaatatgga
gcaaatgtcaccatgcagaaccacgcgggggaaaagccttcccagagcgctgagcgccac
ggacacaccctgtgctcccggtacctggtggtggtggagacctgcatgtcgctggcctcc
caggtggtgaagctaaccaagcagctgaaggaacagacaatgcaacgtgtcacactgcag
aaccagctccaacaacttctggaagcccagaaatcagagggcaaatctctcctttcttcg
cccagttcaccctcctccccagcttccagaaagtcccagtggaaatccccagatgcagat
gatgagcctataggcaaaagcaaaccaggaatccaagaggggattcaagttcttggaagc
ctgtccgtgtccagccgggctagggccaaagctaaagacgaagattcggataaaatccta
cgccagttattaggaaaagatatttcagagaatgtgtgcacccaggaaaagctgtccttg
gaattccaggatgctcaggcttcttctagaaattcaaaaaagaccccactggagaagagg
gaactgaagttagccaggctgaagcagctgatgcagcggccactgagtgagtctgacacg
gactccaacaactctgaggaccccaagggcacgcctgtgagaaaggttgacaggcccaga
ccacagcctgtcgtggaaagcgtggagagtatggacagcgcagaaagcttacacctgatg
ataaagaaacacagcttggcatcaggacgcaggtttccttttagtatcaaggcctccaaa
tctctggagtgccatagcccgtcccccacctcagagagcagcgagccagacttggaatcc
cagagtccaggctcaggaaccgcgcccccaaaccagccctctggagaactccctcagccc
agccctgacagcacagctgcccagaaagtggccacgagtcccaagagcgccctcaagtcc
ccatcttccaagcgccgaacgtcgcagaacttgaaactcagagttacctttgaggagcct
gtggtgcagatggagcaaactagccttgaactaaacggagagaaggaccgagataagggc
agagccctccagcggacctccgcaagcagtgaaccgggggatcaactgaaaaggcctttt
ggaaccttccgatccatcatggagacgctaagtggcaaccagaacaataataataactat
caggcgtccaaccagctgaagacctccactcttcccttaacctcacttgggaggaagacc
gcagacggtaagggaaatccagggagctctgctagcaaaggaaagaataaggcggcataa
DBGET
integrated database retrieval system
