Globicephala melas (long-finned pilot whale): 115860219
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Entry
115860219 CDS
T11080
Symbol
DMXL1
Name
(RefSeq) dmX-like protein 1 isoform X2
KO
K24155
rabconnectin-3a
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115860219 (DMXL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115860219 (DMXL1)
Membrane trafficking [BR:
gmf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115860219 (DMXL1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
115860219 (DMXL1)
RAVE complex
115860219 (DMXL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_2nd
MIOS_WD40
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
115860219
NCBI-ProteinID:
XP_030725671
LinkDB
All DBs
Position
3:97628631..97760001
Genome browser
AA seq
3044 aa
AA seq
DB search
MNLHQVLTGAVNPGDHCFSVGSVGDQRFTAYASGCDIVILGSDFERLQIIPGAKHGNIQV
GCVDCSMQQGKIAASYGNVVSVFEPVNLPKQKKNLELYSQWQKSGQFFLDSIAHNITWDP
AGNRLLTGSSCLQLWSSANLEKSAEDENPDKTDLNFGDWRCIWHCKTASQVHLMKFSPDG
EFFATAGKDDCLLKVWYNVENWRTSVTSPDKSSEKQSQGEIDFSFVYLAHPRAVNGFSWR
KTSKYMPRASVCNVLLTCCKDNICRLWVETFLPNDCLLYGGDCSHWTEPINLTNNFKRNA
SSKERVQNALDVNLKHFRRGRRRSLALVAHTGYLPHQQDPHHVHRNTPLHANALCHFHIA
ASINPATDIPLLPSITSLSLSENEEKSGPFVVHWLNNKELHFSLSMEVFLQQLRKSFEQP
SSEMSVEDSNQADVKSDEEIDDGVDDLKINLEKKELGSDKLVPNSSSVPLPSAAIDHQIE
VLLSEWSKNADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQVQVSFVSRIPVAFPTGDAN
SLCKSIVMYACTKNVDLAIQQGKQKTSSLTRSTSMLISSGHSKSTNSLKLSIFTPNVMMI
SKHADGSLNQWLVSFAEESAFSTVLSISHKSRYCGHRFHLNDLACHSVLPLLLTTSHHNA
LRTPDVDNQKEPYGAVNIEECSLAQQNKSTIDMAFQDPNAVYSELILWRVDPVGPLSFSG
GVSELARINSLHVSAFSNVAWLPTLIPSYCLGAYCNSPSACFVASDGQYLRLYEAVIDAK
KLLYELSNPDISKYVGEVFNIVSQQSTARPGCIIALDPITKLQGRKTQLLHVFQEDFILN
NLEKKRLGKDRILSDAGSSPNEFSEKFYLIVIECTQDNRSLLHMWNLHLKSIPVSLDEKV
DTKISEAVWQPEEHYSSSPEKILSPFSQKYQACRANLQSTSKLTLSSEMVYSQELHLPEG
VEIISVKPSAGHLSSSSIYPICSAPYLLATSCSDEKVRFWRCRVTAEESATSKNGEMDLI
YIWEEWPLLIEDGLQNNSSITVPGRPIEVSCAHTNRLAVAYKQPTSNSRCSQDFVMHVSI
FECESTGGSCWVLEQTVHLDELNTVLDSGISIDSNLVAYNKQEVYLSSKESVTSNTKHLV
HLDWMSREDGSHILTVGIGSKLFMYGPLAGKVQEQTGKESLAFPLWEGTKVVPLSKFVLL
RSVDLVSSVEGSPPFPVSLSWVRDGILVVGMDCEMHVYSQWQPSSKQEPVTTDSYNGSTP
SIISLIKQSNSSSSGLHPPKKTLTRSMTSLAQKICGKKTALDPSVGMEDSGLFEAAHVLS
PTLPQYHPLQLLELMDLGKVRRAKAILSHLVKCIAGEVVALNEAESNHERRFRSLTISAS
GSTTRDPQAFNKSENTDYTEIDSVPPLPLYALLAADDDSYYSSLEKSSNQSTLNNSNQLS
KESYDELFQMSALMTDSHVLKTEEENTKPRVIDLSQYSPTYFGPEHAQVLSGHLLHSSLP
GLSRMEQMSLMALADTIATTSTDIGESRDRSQGGETLDECGLKFLLAVRLHTFLTTSLPA
YRAQLLHQGLSSSHFAWAFHSVAEEELLNMLPAMQKDDPTWSELRAMGVGWWVRNTRILR
KCIEKVAKAAFYKKNDPLDAAIFYLAMKKKAVIWGLYRSQKDSKMTQFFGHNFEDERWRK
AALKNAFSLLGKQRFEHSAAFFLLAGCLRDAIEVCLEKLNDIQLALVIARLYESEFDTSA
TYKSILRKKVLGIELNELNLLNINMHYDPFLRSMAYWILEDYSSALETLIKQPIREDDDQ
VMMSACNPAVFNFYNYLRTHPLLLRRHFGSSDAFSAHMSLTGKSGLAGTINLSERRLFFT
TASAHLKAGCPMLALEVLSKMPKVIKKTKPFCRTSSFLDTSKVCSPSSPFKLDAREDKSS
AIDWSQSLMNGFGSSSEGSSEKQSNSTLSFDWSQPSIVFQDDSLELKWDSDNDEENEDLP
VSMKELKPLQRKVGEKIDETSSKYTDSLSTLDEHDILNPSEDIIAVQLKFRACLKILTVE
LRTLSTGYEIDGGKLRYQLYHWLEKEVIALQRTCDYCSDPEELQSAFSENGDAFGLNEDA
EDLLHQTKVKQLRKNFQEKRQWLLKYQSLLRMFLSYCILHGSHGGGLASVRMELILLLQE
SQQETAEPIFPSPLSEQTSVPLLFACTASAKTVVANPLLHLSNLTHDILHAIINFDSPPH
PDIQSNKVYVMHTLAASLSACIYQCLCGSHNYSSFQTNQFTGMVYQTVLLPHRHSLKTGS
LDEAITPNTSPAHWPGITSLIRLLNSSGEEAQSGLTVLLCEILTAVYLSLFIHGLATHSS
NELFRIVAHPLNEKMWSAVFGGGAHVPSKEQTRSKALPVSSLVEEGEKQNKRFRPSKMSY
RESASVTSSSPPVSQESLIVKEKFIPPELSIWDYFIAKPFLPASQSRPEYDSEESLESDD
EDEDVLASDFHLQEHSNSNSYSWSLMRLAMVQLVLSNLKTFYPFAGHDLAELPVSSPLCH
AVLKTLQCWEQVLLRRLEIHGGPPQNYIASHTSEESVSAGPAILRHKALLEPTNTPFKSK
HHLSLSVKRLWQYLVKQEEIQETFIRNIFTKKRCLNESLEDSCETIKNSMMEEPNINKIE
ADSGYPGGKARIIHKESDIITAFAVNKANRNCIAIASSHDVQELDVSGILATQIYTWVDD
DIEMETKGSEDFLVIHARDDLTAVQGTTPYTHSNPGTPINMPWLGSTQTGRGASVMIKKA
INNVRRMTSHPSLPYYLTGAQDGSVRMFEWGHSQQITCFRSGGNSRVTRMRFNYQGNKFG
IVDADGYLSLYQTNWKCCPVTGSMPKPYLTWQCHNKTANDFVFVSSSSLIATAGLSTDNR
NICLWDTLVAPSNSLVHAFTCHDSGATVLAYAPKHQLLISGGRKGYTCVFDLRQRQQRQL
FQSHDSPVKAIAIDPTEEYFVTGSAEGNIKIWSLSTFSLLHTFINEHARQSIFRNIGTGV
MQIETGPANHIFSCGADGTMKMRILPDQFSPLNEVLKNDVKFML
NT seq
9135 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgcaccaggtgctgaccggggctgtgaaccctggcgaccactgcttctccgtg
ggcagcgtcggcgaccagcgcttcacggcttatgcctctggatgtgacattgttatactg
ggaagtgattttgaaagactgcaaataatcccaggagctaaacatggaaatattcaagta
ggatgtgtagattgttcaatgcaacaaggcaagattgcagcatcctatggaaatgttgta
tctgtttttgaaccagttaacctaccgaagcaaaagaaaaatttggaattatatagtcag
tggcagaaaagtggccaattttttctggactcaatagcacacaatataacttgggatcct
gcaggcaatcgtcttttaactggttctagctgtttgcaactgtggtccagtgctaacttg
gagaaatcagctgaagatgaaaatccagataaaacagatcttaactttggggattggaga
tgcatttggcattgcaaaactgcttcccaagttcatttaatgaagttttcaccagatgga
gaattttttgccactgctgggaaggatgactgtcttttaaaggtatggtataatgtagaa
aactggcggacatctgttacctctccagataaaagttcagaaaaacaatcccaaggagaa
attgacttttcttttgtatatctggcccatcctcgagctgtaaatggattttcctggcgt
aaaacaagcaaatatatgcctagggcttctgtatgtaatgtactgttgacttgctgcaaa
gataacatatgtcgtctttgggtagagacatttttaccaaatgattgtttgctctatgga
ggtgactgcagccattggactgaaccaattaatttaacaaataacttcaagagaaatgct
tccagtaaagaacgagttcagaatgctttagatgtaaatctgaaacattttcgtagaggt
cggaggagatcacttgcacttgtagcacatactggatacctgccacatcagcaagatcct
catcacgttcacaggaacactccactgcatgccaatgcactttgccactttcatattgca
gccagcatcaacccagccacggacattccacttcttccttctattacgtctctgagtcta
agtgaaaatgaagagaagagtggaccttttgtggtacactggctaaacaataaagaactg
catttttctttgtccatggaagtctttttacaacaacttagaaaaagttttgagcaacca
tcttctgagatgagtgtagaagactctaatcaggcagatgtaaaatctgatgaagagatc
gatgacggtgttgatgatctgaaaataaatcttgaaaagaaggaattgggcagtgataaa
ttggtaccaaattcaagttctgtaccattaccatcagctgccattgatcatcagattgaa
gtacttctgtctgaatggagtaaaaatgcagacatgctattcagtattcatcccatggat
ggttctttgctggtttggcatgtggattggctggatgaataccagcctggtatgtttcgt
caagtacaggtgtcctttgtttccagaattcctgtagctttccccacaggtgatgcaaac
tctctctgtaaaagcatagtgatgtatgcctgtaccaagaatgttgacttggctattcag
caagggaaacaaaaaacttccagcctgacacgttccacatcaatgcttatatcttctggt
cacagtaaatcaactaatagtttaaaattaagcatttttacccctaatgttatgatgatt
tcaaagcatgctgatggctccctgaatcaatggcttgtcagttttgccgaggaatctgcc
ttttctacagttctcagtatttcccacaaatccagatattgtggtcatcgctttcatctt
aatgatttagcttgtcactcagtattaccattattgctgacaacgtcacaccataacgca
ttaaggacaccagatgttgataaccaaaaggaaccttatggtgctgtgaatattgaagaa
tgttctttggcacaacagaataaaagcactattgacatggcctttcaggatcccaatgca
gtttacagtgagcttattctttggagagttgatccagttgggccattgtctttttctgga
ggtgtttctgagcttgcccggattaattctcttcatgtttctgcattttccaatgtggca
tggctgcccactcttatacccagttattgtctaggtgcatactgcaactctcctagtgca
tgctttgtagcaagtgatggacaatatctgagattatatgaagcagttattgatgccaag
aaacttctatatgagctttccaatcctgacatttctaaatatgttggtgaagtgtttaac
atcgtaagtcaacagtcaacagccaggccaggatgcattattgcattagatcccattacc
aaacttcaaggcagaaaaacccaactgcttcatgtttttcaagaagacttcattttgaat
aaccttgagaagaaaagactaggaaaagacagaatattatctgatgcaggcagctcacct
aatgaattttcggaaaaattctacctaattgtgatagagtgcacccaagacaaccgttca
ttgttacacatgtggaatttgcatttgaagtccattcctgtctcattggatgaaaaagta
gatacaaaaatatctgaagcagtttggcagccagaagaacattattcttcttctccagag
aagatcttatcccctttttcacagaagtatcaggcttgcagagcaaatctccagagtacc
agcaagttgactctgtcttcagaaatggtttatagccaagagttgcatttgccagaagga
gttgagataataagtgttaagccatcagcaggacatctgagttcttcttccatatatccc
atatgcagtgctccttatttattggcaacttcatgctcagatgagaaagtaagattctgg
agatgtagagtaacagctgaagaatctgccacttcaaagaatggagaaatggatcttata
tacatttgggaagaatggccgttacttattgaagatggactgcagaacaatagtagtata
actgtacctggtaggcctatagaagtcagctgtgcacacacaaatcgtttagcagtagca
tataagcagcctacgtctaatagtagatgttctcaggactttgtgatgcatgtaagtatt
tttgaatgtgagtctacaggaggttcatgctgggtccttgaacagacagttcatttagat
gagttaaatacagtgttggattctggcattagtattgatagcaatttagtggcctataat
aaacaagaggtatatttatccagtaaagagagtgtcacatcaaacacaaagcatttagtt
cacttagattggatgtctagagaagatggttctcatattcttactgtaggaattggatca
aaactttttatgtatggacccctggctggcaaggtacaagaacagacgggtaaggaaagc
ctggcatttcctctctgggaaggtactaaagttgtgcctctttctaaatttgtactgtta
cgaagtgtggacttggtttcttctgtagaaggctctccaccttttcctgtttctttatca
tgggtccgggatggcatcctggtggtaggaatggattgtgaaatgcatgtatattcccaa
tggcagccatcttctaaacaagaaccggttacaacagattcatacaatgggagcactcca
tctataataagtttaataaaacagagtaactcatcaagttctggattacatcctccaaag
aaaaccctgactcgatccatgaccagtcttgcacagaaaatttgtggaaagaaaactgcg
cttgatccttctgtgggtatggaagattcaggtctttttgaagcagctcatgttctttcc
ccaactttacctcagtaccatcctttgcagcttttggaactcatggatcttggcaaagtt
cggagagcaaaggccatcttgtcacatcttgtcaagtgcattgctggggaagttgtggct
ctgaatgaagctgaatctaatcatgaacgccgctttaggtctctcaccatcagtgctagt
ggaagcactactcgagacccccaggcattcaataagagtgaaaatacagattacacagaa
atcgattctgtccctccacttcctttatatgccttacttgcagcagatgatgatagctat
tactcatccttggagaaatctagtaatcagagtaccttaaataactcaaaccagttgtca
aaagaaagttatgatgagctttttcagatgtcagctttaatgactgatagtcatgtgtta
aagacagaagaagaaaatacaaagcccagggttattgacctttcacaatacagtccaact
tactttggtcctgagcacgctcaggttctttctggccacttacttcattctagtttacca
ggactcagccggatggagcagatgtctttgatggctttagcagatacaattgcaactacc
agcactgatattggagaaagcagagacagaagccaaggtggagaaactcttgatgaatgt
ggcttaaaatttcttttggctgttcgacttcatacttttcttacaacttctcttccagct
tatcgagctcaactccttcaccaaggcctgtctagtagtcattttgcctgggcctttcat
tcagtagcagaagaagaactgctgaacatgttgccagcaatgcagaaagatgatcccaca
tggtctgaacttagagctatgggtgtggggtggtgggtccggaatacccgcatcttacgc
aaatgcatagaaaaggtagccaaagcagccttttataaaaagaatgatcctttagatgct
gccattttttaccttgcaatgaaaaagaaagctgtgatttggggattatatagatcccaa
aaagattccaagatgacacagttttttgggcacaattttgaggatgagagatggcgtaaa
gcagctttaaagaatgctttttctttgttaggaaaacaaagatttgaacattcagcagca
ttttttcttttagctggttgcctcagagatgcaattgaggtatgtcttgagaaactgaat
gacattcagttggctcttgtaatagcaagactctatgagtctgaatttgatacatctgca
acatataaatctattttacgtaaaaaagttttgggaattgaactcaatgaactcaatttg
ttgaatataaatatgcattatgatccttttcttcggagtatggcatattggattttagaa
gattatagtagtgctctggaaacattaataaagcaacctatcagagaggatgatgatcaa
gtcatgatgtcagcctgcaatcctgccgtttttaatttctacaattatctaagaacgcat
cctcttttgctgagacgtcattttggatcatctgatgcgttttccgcacacatgagttta
acaggaaaaagtggactggcaggaacaattaatttaagtgaaagaagattattttttact
actgccagtgctcatttaaaagctggctgccctatgttggctttggaagtattatcaaag
atgccaaaagtcatcaaaaaaacgaaacctttttgtagaacatctagttttctggatact
agtaaagtctgttctccttcttctccattcaaattggatgcaagggaagataagtcttct
gctattgattggtcacagtcactgatgaatggttttggatcttcttcagagggttcctca
gagaagcagtcaaattccactctttcttttgactggagccaaccaagtattgtatttcag
gatgactctttagaattaaaatgggacagtgataacgatgaagaaaatgaggatctccct
gtttcaatgaaagaactaaaacctttacagagaaaagtaggggaaaaaatagatgaaaca
agttctaagtacacagactctctcagcacactagatgaacatgacattttaaatccatca
gaagatatcattgcagttcagttaaaatttagagcatgtttaaagattctcacggtagaa
cttcgtactttatctactggatatgaaatagatggtggaaaattgcgataccagctgtac
cactggcttgaaaaagaggtgatagcccttcagagaacttgcgactattgttcagatcct
gaagaattacagtctgcatttagtgaaaatggagatgcatttggattaaatgaagatgct
gaagatttgcttcatcaaacaaaagtgaaacaactgagaaaaaattttcaggaaaaaaga
cagtggcttttgaaatatcagtcactcttgaggatgtttcttagttactgcatactgcat
ggatcccatggtgggggtcttgcatctgtgagaatggaattgattttgcttttacaagaa
tctcaacaggaaacagcagaaccaatatttcctagccctctttcagaacaaacctcagta
cctctcctctttgcttgtacagccagtgccaaaacagtagttgccaatccgttattgcac
cttagtaatctaacacatgatattctgcatgccataataaactttgattcaccaccccat
cctgatatccaaagcaataaagtatatgtaatgcatactttagcagcttcactttctgct
tgtatttatcagtgcctttgtggtagtcataactacagttcatttcaaacaaatcagttt
actggaatggtgtatcagacagtactgcttccccatcgacattctttgaaaacaggaagc
ttagatgaagccataactcccaatacatcaccagctcattggccaggaataacttctcta
attcgacttttgaattcttctggggaggaagcccagtcagggcttacagtcttgctctgt
gagattctcacagcagtgtatcttagtctcttcatccatggcttggcaacacattctagt
aacgaactgtttcggattgtggcccaccctctaaatgaaaaaatgtggtctgctgtattt
ggtggaggtgcacatgttcccagcaaagaacagacacgctcaaaagctttacctgtttct
tcactagtggaagaaggagagaaacagaacaaacgttttaggccatcaaaaatgtcttac
agagaatctgcctcagtgacctcttcctcaccaccagtaagccaggaatcactgatagtt
aaagagaagttcattccacctgagctcagtatctgggactatttcattgccaagcctttt
ctacctgcttctcaaagtagaccagaatatgattcagaggagagtctggaaagtgatgac
gaagatgaagatgttttagcttcagatttccatctccaagagcattctaattcaaattca
tatagttggtcattgatgcgtttggcaatggtgcagttggtgctcagcaatttgaagact
ttctatccctttgcaggtcatgatcttgcagagcttccagttagttcaccactttgtcat
gccgttctaaaaactcttcaatgttgggaacaagttcttctccgacgacttgaaatccat
ggggggccacctcaaaactatattgcaagtcatacctctgaagagagtgtgtctgcaggt
cctgcaattctccgccacaaagctttgctggaacctacaaacactcctttcaaatctaaa
caccatctgtcactgtctgtgaagagactttggcagtacctggtgaagcaggaagaaatt
caagaaacctttatcagaaatatattcacaaagaaaaggtgtctaaatgagtcattagag
gacagctgtgaaaccatcaaaaattctatgatggaggagccaaacatcaataagatagaa
gcagattcgggatatcctggaggtaaagcaagaattattcataaggaatctgatataatt
actgcctttgctgttaataaagcgaatagaaactgcatagcaattgcttcaagccatgat
gttcaagaactagatgtttctggaattctggctacacagatctatacttgggtagatgat
gatatagaaatggaaaccaaagggtcagaagatttcttggttatacatgctcgtgatgat
ttaacagctgtgcagggtacaaccccatacacacatagcaatcctggtactccaattaac
atgccatggcttggtagtacacagactggcagaggagcatcagtgatgattaagaaagcc
attaataatgtcagaagaatgacttctcatccatctcttccttactatctgacaggagct
caagatggaagtgtgagaatgttcgaatggggccattctcaacaaataacctgtttccga
tctggtggcaattcaagagttacaagaatgagatttaactatcaaggaaataagtttgga
atagttgatgctgatggatatttaagtttgtatcaaacaaactggaaatgttgtccagtt
actggaagtatgcctaagccatacctgacttggcagtgtcataacaaaacagccaatgat
tttgtcttcgttagttcctcctctctgatagctacagctggtctttcaactgacaataga
aacatatgtttgtgggacactcttgtagcaccttccaatagtttagtccatgcttttact
tgtcatgatagcggagccactgttttagcatatgctccaaaacatcagctactaatatca
ggtggcagaaaaggctatacatgtgtttttgaccttcggcaacgacagcagaggcagctt
ttccagagccatgattctcctgttaaagccattgctattgatccaactgaagagtacttt
gttacaggatctgctgagggcaacataaagatttggagtctctctacctttagtcttctc
cacacttttatcaatgaacatgctcggcaatccattttcagaaatattggaaccggagtg
atgcaaattgagacagggcctgcaaatcacattttttcatgtggagctgatggaacaatg
aaaatgagaatactgccagatcagtttagcccattaaatgaagtgttgaaaaatgatgtg
aaatttatgctgtaa
DBGET
integrated database retrieval system
