Globicephala melas (long-finned pilot whale): 115860225
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Entry
115860225 CDS
T11080
Symbol
SEMA6A
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
115860225 (SEMA6A)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF3481
Motif
Other DBs
NCBI-GeneID:
115860225
NCBI-ProteinID:
XP_030725685
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Position
3:complement(95193192..95322036)
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AA seq
1044 aa
AA seq
DB search
MRSEALLLYFTLLHFAGAAFPEDSEPISISHGNYTKQYPVFVGHKPGRNTTQRHRLDIQM
IMIMNRTLYIAARDHIYTVDIDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLKKNDDTLFVCGTNAFNPSCRNYKMDTLEAFGDEFSGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIA
VEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
DVIRINGRDVVLATFSTPYNSIPGSAVCAYDMHDVAIVFTGRFKEQKSPDSTWTPVPDER
VPKPRPGCCAGSSSLEKYATSNEFPDDTLNFIKTHPLMDEAVPSIINKPWFLRTMVRYRL
TKIVVDTAAGPYQNHTVVFLGSEKGIILKFLARIGNSGFLNDSLFLEEMSVYNPEKCSYD
GVEDKRIMGMQLDKASSSLYVAFSTCVIKVPLGRCERHGKCKKTCIASRDPYCGWVKEGG
ACAHLSPGSRLTFEQDIERGNTDGLGDCHNSFVALNDISTPLPDHEMSYNTVYGHSSSLL
PSTTTSNSAAQEGYESRGGMLDWKDSPDSTDSLGAVSSHNHQDKKGVIRESYLKGHDQLV
PVTLLAIAVILAFVMGAVFSGIIVYCVCDHRRKDVSSVHRKEKELAHSRRGSMSSVTKLS
GLFGDTQSKDPKPEAILTPLMHNGKLATPSNTAKMLIKADQHHLDLAALPTPESTPTLQQ
KRKPNRGSREWERNQNLINACTKDMPPMGSPVIPTDLPLRASPSHIPSVVVLPITQQGYQ
HEYVDQPKMSEVAQLALEDQAATLEYKTIKEHLSSKSPNHGVNLVENLDSLPPKVPQREA
SLGPPGASLSQNGLSKRLEMHHSSSYGLDYKRSYPTNSLTRSHQAATLKRNNTNSSNSSH
LSRNQSFGRGDNPPPAPQRVDSIQVHSSQPSGQAVTVSRQPSLNAYNSLTRAGLKRTPSL
KPDVPPKPSFAPLSTSMKPNDACT
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcagaagccttgctgctatatttcacactgctacacttcgctggggctgctttc
ccagaagattctgagccaatcagtatttcgcatggcaactatacaaaacagtatccggtg
tttgtgggccacaagccaggacggaacaccacacagaggcatagactggacatccagatg
atcatgatcatgaacagaaccctctacattgctgctagggaccatatttatactgttgat
atagacacctcacacacagaagaaatttattgtagcaaaaaactgacatggaaatctaga
caggccgatgtagacacatgcagaatgaagggaaaacataaggatgagtgtcacaacttt
attaaagtgcttctaaagaaaaacgatgatactttgtttgtctgtggaactaatgccttc
aacccttcctgcagaaactataagatggatactttggaagcttttggggatgaatttagt
ggaatggccagatgcccttacgatgccaaacatgccaacgttgcactgtttgcagacgga
aaactgtactcagctacagtgactgacttccttgccattgatgcagtcatctaccggagt
ctcggagacagcccaaccctacggaccgtcaagcatgattcaaaatggttgaaagaaccg
tattttgtccaagcggtagattatggagactacatctacttcttctttagggaaatagcg
gtggagtacaacaccatgggaaaggtagttttcccaagagtggctcaggtttgtaagaat
gacatgggagggtcacaaagagtcctggagaaacagtggacatccttccttaaagctcgc
ctgaactgctcagttccaggggactctcatttttatttcaacatcctccaggccgttaca
gatgtgattcgtattaatggccgtgatgttgtcctggcaaccttttccacaccttataac
agcatccctgggtctgcagtgtgtgcctatgacatgcatgatgtcgccattgtttttact
gggagattcaaagaacagaagtctccagattccacgtggacaccagttcctgatgaacga
gtgcctaagcctaggccaggttgctgcgctggctcatcctccttagaaaaatatgcaacc
tccaatgaatttcctgacgataccctgaatttcatcaaaacgcacccactcatggatgag
gccgtgccctccatcatcaacaagccatggttcctgaggacgatggtcagataccgcctg
accaaaattgtggtggacaccgctgctgggccatatcagaatcacactgtggttttcctg
ggatcagagaaaggaatcatcttgaagttcttggccaggataggaaacagtggtttccta
aatgacagccttttcctggaggagatgagcgtctacaaccctgaaaagtgcagctatgac
ggagtagaagacaagaggattatgggcatgcaactggacaaagcaagcagctctctgtat
gttgcattttccacttgtgtgataaaggttccccttggccggtgtgaacgacatgggaag
tgcaaaaaaacctgtatcgcttccagagacccctactgtgggtgggtaaaggaaggaggt
gcctgtgcccatctgtcacctggcagtagactgacttttgaacaggacatagagcgtggc
aatacagatggcctgggagactgtcacaattccttcgtggcactgaatgacatttcaact
cctctaccagatcatgaaatgtcttacaacacagtatatgggcactccagttccctcctg
cccagcaccaccacgtccaattcggcggctcaagaggggtatgagtctaggggaggaatg
ctggactggaaggattcacctgacagcacagactctttgggggcagtgtcttcccataat
caccaagacaagaagggagtgattcgggagagttatctcaaaggccacgaccagctcgtt
cctgtcaccctcctggccattgcggtcattctggcttttgtcatgggagccgtcttctcg
ggcatcatcgtctactgcgtctgtgatcaccgtcgcaaagacgtgtcctccgtgcaccgc
aaggagaaggagctcgcccactcgcgccgcggctccatgagcagcgtcaccaagctcagc
ggcctctttggggacacccagtccaaagaccccaagccggaggccatcctcacgccactc
atgcacaacggcaagctcgccactcccagcaacaccgctaagatgctcatcaaggctgac
cagcaccacctggacctggccgccctgcctaccccagagtccaccccgacgctgcagcag
aagcgcaagcccaaccgcggcagccgcgagtgggaaaggaaccagaacctcatcaacgcc
tgcaccaaggacatgccccccatgggctcccccgtcatccccaccgacctgcccctgcgg
gcctcccccagccacatccccagcgtggtcgtgctgcccatcacgcagcagggctaccag
cacgagtacgtggaccagcccaaaatgagcgaggtggcccagttggcgctggaggaccag
gcggccaccctggaatataagaccatcaaggaacatctcagcagcaagagtcccaaccat
ggggtgaacctggtggagaacctggacagcctgccccccaaagtcccccagcgggaggcc
tccctgggtcctcccggagcctccctgtctcagaacggcctgagcaagcggctggagatg
caccactcctcgtcctacgggcttgattataagaggagctaccccacgaactcgctcacg
agaagccaccaggccgccacgctcaaaagaaacaatactaactcctccaattcctcccac
ctctccagaaaccagagctttggccggggagacaacccaccccccgccccgcagagggtg
gactccatccaggtgcacagctcgcagccctcgggccaggccgtgactgtttcgaggcag
cccagcctcaacgcctacaactcactgacccgggcggggctgaagcgcacgccctcgcta
aagccggacgtgccccccaaaccttcctttgcccccctttccacctccatgaagcccaac
gatgcgtgtacataa
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