Globicephala melas (long-finned pilot whale): 115860239
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Entry
115860239 CDS
T11080
Symbol
TRIM36
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM36 isoform X3
KO
K12013
tripartite motif-containing protein 36 [EC:
2.3.2.27
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115860239 (TRIM36)
04121 Ubiquitin system [BR:
gmf04121
]
115860239 (TRIM36)
Enzymes [BR:
gmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115860239 (TRIM36)
Membrane trafficking [BR:
gmf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
115860239 (TRIM36)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
115860239 (TRIM36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
COS
zf-RING_UBOX
ANCHR-like_BBOX
fn3
zf-C3HC4
SPRY
zf-C3HC4_4
zf-RING_5
zf-C3HC4_3
zf-C3HC4_2
RING_XB3-XBAT31
ATP-synt_B
DUF1319
Motif
Other DBs
NCBI-GeneID:
115860239
NCBI-ProteinID:
XP_030725718
LinkDB
All DBs
Position
3:complement(93907848..93951466)
Genome browser
AA seq
717 aa
AA seq
DB search
MEGDGSDSLVTIKNIERELICPACKELFTHPLILPCQHSICHKCVKELLLMLDDSFNDVG
SDNSNQSSPRLRLPSPSMDKIDRISRPGWKRNSLTPRTTTFPCPGCEHDVDLGERGINGL
FRNFTLETIVERYRQAARAATAIMCDLCKPPPQESTKSCMDCSASYCNECFKIYHPWGTV
KAQHEYVGPTTNFRPKILMCPEHETERINMYCELCKRPVCHLCKLGGNHSNHRVTTMSSA
YKTLKEKLSKDIDYLIGKESQVKSQISELNLLMKETECNGERAKEDAITHFEKLFEILEE
RKSSVLKAIDASKKLRLDKFQTQMEEYQGLLENNGLVGYAQEVLKETDQSCFVQTAKQLH
LRIQKATESLKSFRPAAQTSFEDYVVNTSKQTELLGELSFFSSGIDVPEINEEQSKVYNN
ALINWHHPEKDKADSYVLEYRKINRDEEMLSWNEIEVCGTSKVISDLESNCNYAFRVRAY
KGSICSPCSRELILHTPPAPVFSFLFDEKCGYNNEHLLLNLKRDHVESRAGFNLLLAAER
IQVGYYTSLDYIIGDVGITKGKHFWAFRVEPYSYLVKVGVASSDKLQEWLRTPRDTVSPR
YEQDSGHDSGSEDTCFDSSQPFTLVTIGMKKFFIPKSPTSSNEPENRVLPMPTSIGVFLD
YDKGKVGFYDMDHMKCLYERQVDCSHTMYPAFALMGSGGIQLEEPITAKYLEYQETM
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atggagggggatggttcagactcgctggttaccattaagaatattgaaagagagctcatt
tgcccggcatgcaaggagctgtttacccacccgttgattctcccttgtcaacatagtatc
tgtcataaatgtgtaaaagaactcttactgatgcttgatgattcattcaatgacgtggga
tcagacaactccaatcagagcagtcctcgacttcggcttccctcccctagcatggacaaa
attgacagaattagcagaccaggctggaagcgcaattcattgacccctaggacaactact
tttccgtgtcctggctgtgagcatgatgtggatcttggagaacggggaatcaacggtctg
tttcgaaatttcactttggaaactattgttgaaagatatcgtcaggcagccagggcagcc
acagccattatgtgtgacctttgtaaaccaccacctcaagaatccacaaaaagttgcatg
gactgtagtgcaagctactgcaatgaatgcttcaaaatttatcatccttggggtactgta
aaagcgcagcatgagtatgtgggcccaactacgaattttagacccaagattttaatgtgc
ccagaacatgaaacggagagaataaacatgtactgtgaattatgtaagaggccagtttgt
catctctgtaagttgggtggtaatcattccaaccaccgtgtaaccactatgagcagtgcc
tacaaaaccttaaaggaaaagctttcaaaagatattgattaccttattggcaaggagagc
caggtgaagagtcagatttctgaactgaacttgttaatgaaagaaacggagtgtaatgga
gagcgggctaaagaagacgcaattacacattttgaaaagctctttgaaatcctagaagaa
aggaaatcatctgttttgaaggcaattgatgcttctaagaaactaagattagacaaattt
cagactcaaatggaagagtatcaggggctgctagagaacaacggactcgtgggatacgct
caagaagtgctgaaggagacagatcagtcttgctttgttcagaccgcaaaacagctccac
ctcagaatacagaaagctacagaatctttgaagagctttagacctgcggctcagacttct
tttgaagactatgttgttaatacatctaaacaaacagaacttcttggagaattgtccttt
ttctctagtggcatagatgtgccagagatcaatgaggaacagagcaaagtttataacaat
gctttgataaattggcaccatccagaaaaggataaagctgatagctatgtcctcgaatac
cggaagattaatagagatgaagaaatgttgtcttggaatgagatagaagtgtgtggcaca
agtaaagtcatttccgatcttgaaagtaattgtaactatgctttcagagtaagagcctac
aagggttcaatctgcagtccttgcagcagggaattgattcttcatactcctccagctcca
gttttcagtttcctttttgatgaaaaatgcggctacaataatgaacacctcttgctgaac
ttgaagagagaccatgtagagagcagagctggatttaatcttctgcttgctgcagagcgg
atccaagtgggttactacacaagcttagactacatcattggagatgttggaatcacaaaa
gggaagcacttttgggccttccgtgtagaaccatattcatacctggtaaaagtgggagtt
gcttccagtgataaactgcaagaatggctccggactccccgggatacagttagtccaaga
tacgagcaagacagtgggcatgacagcggaagtgaggatacctgttttgattcttcacaa
ccctttacgttagttactataggcatgaagaaattttttattcccaagtcacctacttct
tctaatgaacctgaaaaccgagttctccccatgccaacaagtataggggttttcctcgac
tatgataaaggcaaagtgggtttctatgatatggatcacatgaaatgcctttatgagcgc
caagtggactgttcgcatactatgtacccagcatttgcattaatgggcagtggaggaatt
cagcttgaagaacccatcacagcaaaatatctagaataccaagagaccatgtag
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