KEGG   Globicephala melas (long-finned pilot whale): 115860435
Entry
115860435         CDS       T11080                                 
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1
  KO
K14315  nucleoporin NDC1
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf03013  Nucleocytoplasmic transport
gmf05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115860435 (NDC1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    115860435 (NDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmf03019]
    115860435 (NDC1)
Messenger RNA biogenesis [BR:gmf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     115860435 (NDC1)
SSDB
Motif
Pfam: Ndc1_Nup
Other DBs
NCBI-GeneID: 115860435
NCBI-ProteinID: XP_030726057
LinkDB
Position
1:143006440..143054866
AA seq 706 aa
MGPSGGLPPFELRWRVGSLYPVPFRVGAAITMATAASLPCAGGPRDILWRVLGWRIVTSI
VWSLLLLPICTTVFVIFSSIDLFHPIQWLSDSFSDLYSSYIIFYLLLLSVVIVIISIFNV
EFYTVVPSIPCSRLALIGKIIHPQQLMHSFIHAAMGMTMAWCAAVITKGQYSFLVVPCTV
TESLDSPAAQTCLNEYHLFFLLAGAFMGYSYSLLYFINNMNYLPFPIIQQYKFLRFRRSL
PLLVKHSCVESLFLLRNFCIVYYFLGHIPKAWISTAMDLQLDEQFHRPLDTVSGLLNLSL
LYHVWLCGVFVLMTWYISWILFKIYATEARLFPVQPPFSEESDECLPKVLNSSPPLIIKY
LALQDLMLLSQYSPSRRQEVFSLSQPGGHPHSWTAISRECLNLLNDMTQKLVLYQEAAAT
NGRVMSSSYPVEPKKLNSPEETTFQTPKSSQMPRPSVPSLIKTSLFSSKLSTPDVASPLA
TPFGSSVVNRMTGIFDVNTCYASPQSPQLTRRGPRLWTSASGQQMTEYSNPSPSTSVSAE
GKTVRQPNMIYSWIQNKREQIKNFLSKRVLIMYFFSKHPEASIQAVFSDAQMHIWALEGL
SHLVAASFTEDRFGVVQTTLPAILNTLLTLQEAVDKYFKLPHASSKPPRISGSLVDTSYK
TLRFAFRASLKTAIYRITTTFGEHLNAVQASAEHQKRLQQFLEFKE
NT seq 2121 nt   +upstreamnt  +downstreamnt
atggggccctcggggggccttcctccctttgaactgcggtggcgggtgggctcactgtat
cctgtacctttcagagtaggggccgccatcaccatggccactgctgcgagcctgccgtgc
gccggcggaccgcgggacatcctgtggcgcgttttgggctggaggatagttacaagtatt
gtctggtcattgctgcttctgcccatctgtaccacagtatttgtcatcttcagcagcatt
gatttatttcatcctatacagtggctgtctgattctttcagtgatctgtatagttcctat
ataatcttttaccttctgctgctgtcagtggtaatagtaataataagtattttcaatgtg
gagttctatacagttgtgccttccattccttgctcaagactggcactgatagggaagatc
attcatcctcagcagctcatgcactcctttattcatgctgcaatgggaatgacgatggct
tggtgtgctgcggtgataaccaagggtcaatacagttttcttgtggttccctgcactgtt
actgagagcttagatagccctgctgcacaaacctgcttaaatgagtatcacctttttttt
ctgctggctggagcatttatgggctatagctatagcctcctgtattttattaacaacatg
aactatcttccatttcccatcatacagcaatacaagttcttgcgcttcaggaggtctctg
cctttgctagttaagcatagttgtgtggaatcactgttcctgcttagaaatttctgcatt
gtgtattattttcttggccacattcccaaagcttggattagcactgctatggaccttcag
ttagatgagcagtttcataggcctcttgacactgtgagtggcctcttgaatctctcatta
ctttaccatgtctggctctgtggtgtctttgtcctgatgacttggtacatctcatggatc
ctcttcaaaatctatgccacagaggctcgtctgttccctgttcaaccaccattttcagaa
gagtcagatgaatgcctcccgaaagttttaaacagcagtcctcccctcatcataaagtat
ttggccttgcaggacctgatgttgctttctcaatattctccttcacgaagacaagaagtt
tttagccttagccagccaggtggacatccccacagttggacagccatttcaagagagtgt
ttgaatcttttaaatgatatgactcagaaacttgtactctatcaagaagctgctgctaca
aatgggagagtgatgtcttcatcctacccagtggaacctaagaaattgaattctccagaa
gaaactacttttcaaacccccaagtctagccagatgcctcggccttcagtgccatcatta
attaagacatcgctgttctcctcaaaattgtctacacctgatgttgcaagtcccttggcg
accccatttggctctagtgtagtgaatcggatgactgggatttttgatgtaaacacgtgc
tatgcgtcacctcaaagtcctcagcttacaagaagagggccaagattatggacttcggct
tctggtcagcaaatgactgaatattctaatccttctccatctacctctgttagtgctgag
ggtaagacagtgagacagcccaatatgatttattcatggattcagaataaacgtgaacag
attaagaatttcttatcaaaacgggtgctgataatgtattttttcagtaagcacccagag
gcctccattcaggctgttttttcagatgcccaaatgcatatttgggcattagaaggtctg
tctcacttagtagcagcatcatttacagaagatagatttggagttgtccagactacacta
ccagctattcttaatactttgttgacgctacaagaggcagttgataagtacttcaagctt
cctcatgcttccagtaaaccacctcggatttcaggaagcctagtggacacttcttataaa
acattaagatttgcctttagagcatcactaaaaactgccatctatagaataactactaca
tttggtgaacatctgaatgctgtgcaagcatctgcagaacatcagaaaagacttcaacag
ttcttggagttcaaagaatag

DBGET integrated database retrieval system