Globicephala melas (long-finned pilot whale): 115860836
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Entry
115860836 CDS
T11080
Symbol
TAPBP
Name
(RefSeq) tapasin isoform X1
KO
K08058
TAP binding protein (tapasin)
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04612
Antigen processing and presentation
gmf05163
Human cytomegalovirus infection
gmf05168
Herpes simplex virus 1 infection
gmf05169
Epstein-Barr virus infection
gmf05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
115860836 (TAPBP)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
115860836 (TAPBP)
05168 Herpes simplex virus 1 infection
115860836 (TAPBP)
05163 Human cytomegalovirus infection
115860836 (TAPBP)
05169 Epstein-Barr virus infection
115860836 (TAPBP)
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Gene cluster
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Motif
Pfam:
C1-set
ig
PSII_Ycf12
Motif
Other DBs
NCBI-GeneID:
115860836
NCBI-ProteinID:
XP_030726948
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All DBs
Position
11:complement(62936152..62946691)
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AA seq
451 aa
AA seq
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MKPLSLLLAVALGTATVVSAGPAVIECWFVEDAGGGRLSKKPSALLLRQSSESPPPRPDL
DPERYLKVHDPAGTLLAAFRRYPRDAPAPRCEMSHYVPLPASAIWLSGLTPEQSCPRALD
GRWLMVSMSSPVLSLSSLLRPQSEPQPEPALITMATAVLTVLTHTPTPRIRLGQDALLDL
SFAYSPPTPKAATSLAPGPPPFGLEWRRQHLGKGHLMLAATPGLSGQMPAAREGAVAFAA
WDDDEPLGPWTGNGTFWLPAVQPFQEGTYLATVHLPYLQGQTTLELAVQKPPKVTLTPAP
LIWAAPREAPPELLCLVSHFYPSEGLEVEWELWGGPEGRFQKAEGQRWLSALSHHSDGSV
SLSAHLQPPPVTTGQHGARYACRVHHPSLPALGRSAEVTLQVAGLSGPSLEDGVGLFLSA
FLLLGLINVLGWAGESAYLGTSKDSVEKKTQ
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctctgtccctgctcctcgctgtggctctgggcacggcgaccgtcgtctcggcg
ggacccgcagtgatagagtgctggttcgtggaggatgcgggcgggggccggttgtccaag
aaaccctctgcactgctgctgcgccagagctcggagagcccacctccccggccggacctc
gacccagagcgctacctcaaagtgcatgaccccgcgggcaccctcctggccgccttcagg
cgatacccgcgggacgcccccgcgccacgctgcgaaatgagccactacgtcccgcttcct
gcctcggcgatctggctcagcggcttgaccccggagcagagctgcccgcgggccctggat
gggaggtggctcatggtcagcatgtccagcccggtcctcagcctctccagccttcttcga
ccacagtccgagcctcagccggagcctgctctcatcaccatggcaacagctgtgctgact
gtcctcactcacacccccacccctcgcatccgattgggacaagatgccctgctggacctg
agcttcgcctactcgccccccacccccaaggctgctacctctctggccccaggtccccct
ccctttgggctggaatggcgacgccagcacctgggtaaggggcacctgatgctggctgca
actcctgggctgagtgggcaaatgccagctgcccgagagggggcggtggcatttgctgct
tgggatgatgatgagcccttggggccgtggaccggaaatgggaccttctggctgcctgca
gtgcagcccttccaggagggcacctatctggctactgtacacctgccatacctacaaggg
cagaccaccctggagcttgccgtacagaagccccccaaggtgaccctgacaccagcacct
cttatatgggctgcccccagggaggcacccccggagctgctctgcctcgtgtcccacttc
tacccctccgagggcctggaggtggagtgggagctctggggtggcccagagggtcgcttt
cagaaggccgaggggcagagatggctctccgccctaagccatcactcagatggctccgtg
agcctctctgcacacctgcagccacccccagtcaccaccgggcagcatggggcacgctat
gcctgtcgtgtccaccaccccagcctgcccgccttggggcgcagcgccgaggtaaccctg
caggtagctggtctctctgggccctctctggaggatggcgtaggcctcttcctgtctgcc
tttctcctccttgggctcatcaacgtgctgggctgggccggtgagtctgcctacctggga
acttccaaggattcagtggaaaagaaaacacagtga
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