Globicephala melas (long-finned pilot whale): 115860888
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Entry
115860888 CDS
T11080
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04151
PI3K-Akt signaling pathway
gmf04510
Focal adhesion
gmf04512
ECM-receptor interaction
gmf05145
Toxoplasmosis
gmf05146
Amoebiasis
gmf05165
Human papillomavirus infection
gmf05200
Pathways in cancer
gmf05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
115860888 (LAMB1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115860888 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115860888 (LAMB1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
115860888 (LAMB1)
09162 Cancer: specific types
05222 Small cell lung cancer
115860888 (LAMB1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
115860888 (LAMB1)
09174 Infectious disease: parasitic
05146 Amoebiasis
115860888 (LAMB1)
05145 Toxoplasmosis
115860888 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
CorA
F5_F8_type_C
BNR_6
ATG17_like
Motif
Other DBs
NCBI-GeneID:
115860888
NCBI-ProteinID:
XP_030726998
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All DBs
Position
9:complement(89859550..89933238)
Genome browser
AA seq
1786 aa
AA seq
DB search
MGRLQMFAFSFLALCGAQVSAQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLYK
PEPYCIVSHLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVEN
VTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGISTG
PMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFRIEDPYSPRIQNLLKITNLRIKFVKL
HTLGDNLLDSRMEIREKYYYAVYDMVIRGNCFCYGHASECAPVDGFHTEGEGMVHGHCMC
RHNTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLATGNVSGG
VCDECQHNTMGRNCEQCKPFYYQHPERDIRDPNLCEQCTCDPAGSQNKGVCDSYTDFSAG
LIAGQCRCKLHVEGEHCDICKEGFYGLSTEDPFGCKSCTCSPLGTIPGRNPCDSETGYCY
CKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNSCSAESGQCVCKPHMIGRQC
NGVESGYYFPTLDHYLYEAEEANLGPGVSIVERQYIQDRIPSWTGAGFVRVPEGAYLEFF
IDNIPYSMEYDILIRYEPQLPDHWEKAVITVQRPGKIPSSSRCGNTVPDDDNQVVSLSPG
SRYVVLPRPVCLEKGVNYTVRLELPQYTSSDSNVDSPYTLIDSLVLMPFCKSLDIFTVGG
SGDGVVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGLACECDPQGS
LSSVCDPSGGQCQCRPNVVGRRCDRCAPGTFGFGPSGCKSCECHLQGSVNAFCDPITGQC
HCFQGVYTRQCDRCLPGYWGFPSCQPCQCNGHADDCDSVTGECLSCQDYTTGHNCERCSA
GYYGDAIIGSGDHCRPCPCPDGPDSGRQFASSCYQDPVTLQLACVCNPGYIGSRCDDCAS
GFFGNPSDVGGTCQPCRCHHNIDTTDPEACDKETGRCLKCLYHTEGEHCQLCRFGYYGDA
LQQDCRKCVCNYLGTVQERCNGSDCQCDKITGQCLCLPNVMGQNCDRCAPNTWQLASGTG
CDPCNCDAAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPSVECRACDCDPRGIE
TLQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPDCMPCHQCFALWDVIIAELTNRTRKF
LEKAKALKISGVIGPYRETVDSVEKKVNEIRDILAQSPAAEPLKNIGNLFEEAEKLTKDV
TEKMAQVEVNLSDTATQNNSTARELDALQTEAENLDNTVKELAEQLEFIKNSDIRGALDS
ITKYFQMSLEAEERVNASTTDSSGPVEQSARTRDRVEDLMLERESQFREKQEEQARLLDE
LAGKLQSLDLSAAAEMTCGTPPGASCSETECGGPNCRTDEGQKQCGGPGCGGLVAVAHGA
WQKAMDFDQDVLSALAEVERLSKMVSEAKLRADEAKQNAQAVLLKTNATKEKVDKSNEDL
RNLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVI
LQQSAADIARAEMLLEEAQRASNSATDVKVTADMVKEALEEAEKAQIAAEKAIKQADEDI
QGTQNLLTSIESETAASEETLLNASQRLSELERNVEELKRKAAQNSGEAEYIEKVVYTVK
QSAEDVKKTLDGELDEKYKKVENIIAQKTEESADARRKAELLQNEAKTLLAQANSKLQLL
KDLERKYEDNQKYLEDKAQELVRLEGEVRSLLKDISQKVAVYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggggcggctccagatgttcgcgttcagtttcttagccctgtgcggagcccaagtgagt
gctcaagaacccgagttcagctacggctgcgcggagggcagctgctacccggccaccggc
gaccttctcatcggccgagcccagaagctctcggtgacctcgacctgtgggctgtacaaa
cccgagccttactgtatcgtcagccacctccaggaggacaaaaaatgcttcatatgcaat
tcacaagatccttatcatgaaaccctgaaccctgacagtcatctcattgaaaatgtggtc
acgacatttgctccaaaccgtcttaagatctggtggcaatccgaaaatggcgtggaaaat
gtaaccatccaactggatttggaagcagaattccatttcactcatctcatcatgaccttc
aagacattccgaccagccgctatgctgatagaacgatcgtccgactttggaaaaacctgg
ggtgtatacagatactttgcctatgattgtgagagctcgtttcccggcatttccaccggc
cccatgaaaaaagtcgatgatataatttgtgattcccgatattctgacattgaaccctca
acggaaggagaggtgatttttcgtgctttagatcctgctttcagaatagaagatccttac
agtccaaggatacagaatctcctaaaaatcaccaacttgaggatcaagtttgtgaaacta
catactttgggagataaccttttggattccagaatggaaatcagagaaaagtactattac
gcggtttacgatatggtgattcgaggaaactgcttctgctatggccacgccagcgagtgt
gccccggtggatggattccacacagaaggagaaggaatggttcacggacactgcatgtgc
aggcataacaccaagggcttaaactgtgaacagtgcatggatttctaccatgatttacct
tggagacccgccgaaggtcgaaacagcaatgcctgtaaaaaatgtaactgcaacgaacat
tccagctcttgccacttcgacatggcggtctacttggccactggcaacgtcagcggaggg
gtgtgtgacgagtgtcagcacaacacgatggggcgcaactgcgagcagtgcaaaccgttt
tactaccagcacccggagagagacatccgggatcctaatctctgtgaacaatgtacctgt
gacccagctggttctcagaacaagggagtctgtgacagttacacggatttttctgccggt
ctcattgctggtcagtgtcggtgtaaattacacgtggaaggagaacattgtgatatctgc
aaagaaggcttctatggtttaagcactgaagatccatttggttgtaaatcttgtacttgc
agtcctctgggaacgattcctggcaggaatccttgtgattctgagactggttactgctac
tgtaagcgtctggtgacaggacagcattgtgaccagtgtctgccagagcactggggctta
agcaatgacttggatggatgtcgaccttgtgactgtgaccttgggggagccttaaacaat
agttgctctgcagagtcaggccagtgcgtctgcaaaccccacatgatcggacgccagtgc
aacggagtggaatctggttactacttccccaccttggatcactacctctacgaagcagaa
gaagccaacttggggcctggggtcagcatagtggagcggcagtatatccaggaccgtatt
ccttcctggactggagcaggcttcgtccgagtgcctgaaggggcttatttggagttcttc
atcgacaacataccatattctatggagtatgacatcctaattcgctatgagccacagctc
cccgaccactgggagaaagctgtcatcacagtgcagcgacctgggaagattccatccagc
agccgatgtggaaacactgttcctgatgatgacaaccaggtggtgtccctatcgcctggc
tccaggtatgtggtcctcccccgccccgtgtgcttggagaagggtgtgaactacacagtg
aggttagagctgccccagtatacctcctcggacagcaatgtggacagcccctacacgctg
atcgattctcttgttctcatgccattctgtaagtcgctggacatcttcactgtgggaggc
tcaggagatggggtcgtcaccaacagtgcctgggaaacctttcagagataccgatgtctg
gagaacagcagaagcgtcgtgaagactccgatgaccgatgtttgcagaaacatcatcttt
agcatttccgccctgttacaccagacaggcctggcttgtgagtgtgaccctcagggctcc
ttaagttccgtctgcgaccccagcggaggccagtgtcagtgccggccaaatgtggttgga
agaaggtgtgacagatgtgcgcccggcacctttggctttggccccagtgggtgcaaatct
tgtgagtgccacctgcaaggatctgtcaatgctttctgtgaccccatcactggccagtgc
cactgtttccagggggtgtacacgcggcagtgtgaccgctgcttacccgggtactggggc
tttccaagctgccagccctgccagtgcaacggccatgcagatgactgcgactcagtgaca
ggggaatgcctgagctgccaggactacaccacggggcataactgtgaaaggtgctcggct
ggttactatggagacgccatcattgggtcaggagatcactgccgtccttgtccgtgtcca
gatggtcccgacagcggacgccagtttgccagtagctgttatcaagaccctgttacttta
cagcttgcctgtgtctgtaatcctggatacatcggctccagatgcgacgactgtgcctcg
ggcttctttggcaatccctcggacgtggggggcacgtgtcagccttgccggtgtcaccac
aacatcgacacgacggacccagaagcctgtgacaaggagaccgggaggtgcctcaagtgc
ctgtaccacacggagggcgagcactgccagctctgccgcttcggttactatggcgacgcc
ctccagcaggattgtcgcaagtgtgtctgcaattacctgggcaccgtgcaggagcgctgt
aacggctctgactgccagtgcgacaaaatcaccgggcagtgcttgtgtctccctaatgtg
atgggccagaactgtgaccgctgtgcacccaacacctggcagctggccagcgggacaggg
tgtgacccgtgcaactgcgacgctgctcattcctttgggccgtcttgtaacgagttcacg
gggcagtgccagtgcatgcctggcttcggaggccgcacgtgcagcgagtgccaggagctt
ttctggggggaccccagcgtggagtgccgagcctgtgactgcgaccccaggggcatcgag
acactgcagtgtgaccagtccaccggccagtgtgtctgcgtcgagggtgtggagggtcca
cgctgtgacaagtgcactcgggggtactcgggcgtcttccccgactgcatgccctgccac
cagtgctttgccctttgggacgtgatcatcgccgagctgaccaacaggacacggaagttc
ctggagaaagccaaggccttgaagatcagtggcgtgattgggccttaccgggagactgtg
gactcggtggagaagaaagtcaacgagatcagagacatcctggcccagagcccagccgcc
gagccgctgaagaacatcgggaacctctttgaggaagcagagaaactaaccaaagatgtt
acagaaaagatggctcaagtagaagtaaatttatccgacacagctacgcaaaacaacagc
acggccagagaactagatgctctacagacagaagcagaaaacctggataacacagtgaag
gagcttgctgaacaactggaatttatcaaaaattcagatattcggggcgccttggacagc
atcaccaagtatttccagatgtctctcgaggcagaggagcgtgtgaacgcctccaccaca
gattccagtggccccgtggagcagtcggcccgcactcgggacagagtggaagacttgatg
ttggagcgagagtcccagttcagggaaaaacaggaggagcaggcccgccttctggatgaa
ctggcaggcaaactacaaagtcttgacctttcagctgctgccgaaatgacgtgtggaaca
cctccgggagcttcctgttccgagaccgaatgtggcggcccaaactgcagaactgacgaa
ggacagaagcagtgtggggggcccggctgtggcgggctggtcgctgtcgcacacggcgcc
tggcagaaagccatggactttgaccaagatgtcctgagtgccctggctgaggtggaaagg
ctctccaagatggtctctgaagcaaaactgagggcagatgaggcaaaacagaatgctcaa
gctgttctgttgaaaaccaatgctaccaaagaaaaagtggacaagagcaatgaggatctg
agaaatctgatcaagcaaatcaggaactttttgacccaggatagtgctgacctggacagc
attgaagcagttgctaatgaagtactgaaaatggaaatgcctagcaccccacagcagtta
cagaacttgacagaagatattcgtgaacgagttgaaagcctttctcaagtagaggttatt
ctacagcagagtgctgctgacattgccagagctgagatgttgctagaagaagctcaaaga
gccagcaacagtgcaacagatgttaaagtcactgcagacatggtgaaggaagctctggaa
gaagcagaaaaggcccagattgcagcagagaaggcaattaaacaagcagatgaagacatc
caaggaacccagaacctgctaacttcaatcgagtctgaaacagcagcttccgaggaaacc
ttgttgaatgcctcccagcgcctcagcgagctagagagaaacgtggaagaacttaagcgg
aaagctgcccagaactctggggaggcagaatatattgaaaaagtagtatatactgtgaaa
caaagtgcagaagatgttaagaagactctggacggtgaacttgatgaaaagtacaagaaa
gtggaaaatataattgcccaaaaaactgaagagtcagctgatgccagaaggaaagctgaa
ctgctacaaaacgaagcaaaaacacttttggctcaagcaaacagcaagctgcaactcctg
aaagatttagaaagaaaatatgaggacaatcaaaaatatctagaagacaaagctcaagaa
ttagtaagactggaaggagaagtccgttcactcctaaaagatataagccagaaagtggct
gtttacagcacctgcttgtaa
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