Globicephala melas (long-finned pilot whale): 115861270
Help
Entry
115861270 CDS
T11080
Symbol
RABGEF1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04137
Mitophagy - animal
gmf04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
115861270 (RABGEF1)
04137 Mitophagy - animal
115861270 (RABGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115861270 (RABGEF1)
Membrane trafficking [BR:
gmf04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
115861270 (RABGEF1)
Protein recycling
Other Rab GTPase associated proteins
115861270 (RABGEF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KCTD_C
VPS9
BTB_2
DUF5601
zf-A20
BTB_3
SSTK-IP
CID_GANP
Motif
Other DBs
NCBI-GeneID:
115861270
NCBI-ProteinID:
XP_030727777
LinkDB
All DBs
Position
15:complement(14408981..14496533)
Genome browser
AA seq
783 aa
AA seq
DB search
MVVVTGREPDSRRPDGAMSSSDAEDDFLEPATPTATQAGHALPLLPQEFPEVVPLNIGGA
HFTTRLSTLRRYEDTMLAAMFSGRHYIPTDAEGRYFIDRDGAHFGDVLNFLRSGDLPPRE
RVRAVYKEAQYYAIGPLLEQLENMQPLKGEKVRQAFLGLMPYYKDHLERIVEIARLRAVQ
RKARFAKLKVCVFKEEMPITPYECPLLSSLRFERSESDGQLFEHHCEVDVSFGPWEAVAD
VYDLLHCLVTDLSAQGLTVDHQCIGVCDKHLINHYYCKRPIYEFKITWWKKMSLKSERRG
IHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAERLQREEEEAF
ASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRVGSKKAEIQEPKAPSPSIN
RQTSIETDRVSKEFIEFLKTFHKTGQEIYKQTKLFLETMHYKRDLSIEEQSECTQDFYQN
VAERMQTRGKVPPERVEKIMDQIEKYIMTRLYKYVFCPETTDDEKKDLAIQKRIRALHWV
TPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIFNAIKVTKNE
PASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNLCCAVAFIEK
LDAQSLNLSQEDFDRYMSGQTSPRKQESENWSPDACLGVKQMYKNLDLLSQLNERQERIM
NEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIRPPNQSLASIDSENVENDKLPPPLQPQV
YAG
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggtggtagtcacggggcgggagccagacagccgtcgcccggacggtgccatgtccagc
tccgacgccgaagacgactttctggagccggccaccccgacagccacgcaggcggggcac
gcactgcctctcctgccgcaggagttccctgaggttgtcccccttaacatcggaggggct
cacttcaccacacgcctgtccaccttgcggcgctacgaggacaccatgctggcggccatg
ttcagcgggcggcactacatccccacggatgccgagggccgctacttcattgatcgggac
ggtgcgcacttcggagatgtgctgaatttcctgcgctcgggggacctgccgccccgggag
cgcgtgcgggccgtgtacaaagaggcccagtactatgccatcgggcctctcctggagcag
ctggagaacatgcagccactgaagggggagaaagtgcgccaagcgtttctgggactcatg
ccctattacaaagaccatttggagcggattgtggagattgcccggctgcgcgccgtccag
cggaaggcccgctttgccaagctcaaggtctgtgtcttcaaggaggagatgcccatcacc
ccctacgagtgtccgcttctcagctccctgcgctttgaacggagcgagagtgacggacag
ctcttcgagcaccactgcgaagtggatgtgtctttcgggccctgggaggccgtggctgac
gtttatgacctgttgcactgcctggtcacggacctctcggcccagggcctcaccgtggac
caccagtgcatcggggtgtgtgacaagcacctcatcaaccactactactgcaagcgcccc
atctatgagttcaagatcacatggtggaagaagatgagtcttaagtctgagcgccgagga
attcatgtggatcaatcagagctcctgtgcaagaaaggatgtggttattacggcaaccct
gcttggcagggtttctgctccaagtgctggagggaggagtaccacaaagccaggcagaag
cagattcaggaggattgggaactagcagagcgactacagcgggaggaagaagaggccttt
gccagcagtcagagcagccaaggggcccaatccctcacattttccaagtttgaagaaaag
aaaaccaatgagaagacccgcaaggttaccacagtgaagaaattcttcagtgcttcatcc
agggttggatcaaagaaggcagaaattcaggaaccaaaagctcccagtccttctataaac
cggcaaaccagcattgaaacggatagagtgtctaaagagttcatagaatttctcaagacc
ttccacaagacaggccaagaaatctataagcagaccaagctgtttttggaaacaatgcat
tacaaaagggatttaagcattgaggaacagtcagagtgtactcaggatttttaccagaat
gtggctgagagaatgcagactcgtggaaaagtgcctccagaaagagttgagaagataatg
gatcagattgaaaagtacatcatgactcgtctctataaatatgtgttctgtccagaaact
actgatgatgagaagaaagatctcgctattcaaaaaaggatcagagccctgcactgggtt
acacctcagatgctttgtgtccctgttaatgaagaaattccagaagtgtctgatatggtg
gtgaaagcaattacagatatcattgaaatggattctaagcgtgtgccccgggataagttg
gcctgcatcaccaggtgcagcaagcacatcttcaatgccatcaaggtcaccaagaacgag
ccagcttcagctgatgacttcttacccactctcatctacattgttctgaagggcaacccc
ccacgccttcagtccaatatccagtatatcacccgcttctgcaacccaagccgattgatg
actggagaggatggctactatttcaccaacctgtgttgtgccgtggctttcattgagaaa
ttagacgctcaatctttgaatttaagtcaggaagattttgatcgatacatgtctggccag
acttctcccaggaagcaggaatctgagaattggtctcctgatgcttgcttaggtgttaag
cagatgtataagaatttggatctcctgtctcaattgaatgaacggcaggaaaggattatg
aatgaagccaagaagcttgagaaagacctaatagattggacggatggaatcgcaaaagag
gttcaagacattgttgagaaatacccgcttgaaattaggcccccaaatcagtctttagct
tctattgactctgaaaatgttgaaaatgataaacttcctccaccattgcaacctcaagtt
tatgcaggatga
DBGET
integrated database retrieval system
