KEGG   Globicephala melas (long-finned pilot whale): 115861472
Entry
115861472         CDS       T11080                                 
Symbol
STUB1
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP
  KO
K09561  STIP1 homology and U-box containing protein 1 [EC:2.3.2.27]
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf04120  Ubiquitin mediated proteolysis
gmf04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115861472 (STUB1)
   04120 Ubiquitin mediated proteolysis
    115861472 (STUB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:gmf03110]
    115861472 (STUB1)
   04131 Membrane trafficking [BR:gmf04131]
    115861472 (STUB1)
   04121 Ubiquitin system [BR:gmf04121]
    115861472 (STUB1)
Enzymes [BR:gmf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     115861472 (STUB1)
Chaperones and folding catalysts [BR:gmf03110]
 Other chaperones and cochaperones
  Others
   115861472 (STUB1)
Membrane trafficking [BR:gmf04131]
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    115861472 (STUB1)
Ubiquitin system [BR:gmf04121]
 Ubiquitin ligases (E3)
  U-box type E3
   115861472 (STUB1)
  Multi subunit type E3
   STUB1-CHIC2  complex
    115861472 (STUB1)
SSDB
Motif
Pfam: U-box CHIP_TPR_N TPR_1 TPR_2 ANAPC3 TPR_16 TPR_8 TPR_17 TPR_11 TPR_12 TPR_19 ARM_TT21_C TPR_6 TPR_14 TPR_9 TPR_CcmH_CycH ARM_TT21 TPR_10
Other DBs
NCBI-GeneID: 115861472
NCBI-ProteinID: XP_030728155
LinkDB
Position
15:complement(37584104..37586536)
AA seq 304 aa
MKGKEEKEGGARLSAGGGGSPEKSPSAQELKEQGNRLFVGRKYPEAAACYGRAITRNPLV
AVYYTNRALCYLKMQQHEQALADCRRALELDGQSVKAHFFLGQCQLEMESYDEAIANLQR
AYNLAKEQRLNFGDDIPSALRIAKKKRWNSIEERRIHQENELHSYLTQLIVAERERELEE
CQRNHEGDEDDGHLRAQQACIEAKHDKYLADMDELFSQVDEKRKKRDIPDYLCGKISFEL
MREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAMKEVIDAFISENGW
VEDY
NT seq 915 nt   +upstreamnt  +downstreamnt
atgaagggcaaggaggagaaggagggcggcgcgcggctgagcgccggcggcggcggcagc
ccggaaaagagcccgagcgcgcaggagctcaaggagcagggcaaccggctcttcgtgggc
cgcaagtacccggaggcggcggcctgctatggccgcgccatcacccggaatcccttggtg
gcggtgtattacaccaaccgggcattgtgctacctgaagatgcagcagcatgagcaagct
ctggctgactgccggcgcgccctggagctggacgggcagtctgtgaaggcacacttcttc
ctggggcaatgccagttggagatggagagctatgatgaggctattgccaacctgcagcga
gcctacaacctggccaaggagcagcggctcaactttggggacgacatccccagtgctctg
cgcatcgcgaagaagaagcgctggaacagcattgaggagcggcgcatccaccaggagaac
gagctgcactcttacctcacacagctcattgtggccgagcgtgagagggagctggaagag
tgtcagcggaaccatgagggtgatgaggacgatggccacctccgggcccaacaggcctgc
attgaggccaagcatgacaagtacttggcagacatggatgaactcttctcccaggtagac
gagaagagaaagaagcgagatatacccgactacctgtgtggcaagatcagctttgagctg
atgcgggagccctgcatcacacccagtggtatcacctatgaccgcaaggacattgaagag
cacctgcagcgtgtgggccatttcgaccctgtgactcggagccccctgacccaggaacag
ctcatccccaacctggctatgaaagaggtcattgacgcgttcatctccgagaatggctgg
gtggaggactactga

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