Globicephala melas (long-finned pilot whale): 115862252
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Entry
115862252 CDS
T11080
Symbol
NPAS1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
gmf Globicephala melas (long-finned pilot whale)
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KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115862252 (NPAS1)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115862252 (NPAS1)
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GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
115862252
NCBI-ProteinID:
XP_030729677
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Position
19:complement(8619625..8636099)
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AA seq
594 aa
AA seq
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MAAPYPSSGGGGEVRCGGGRGGSVPWDFLPGFVVKTPPGPCLQAQRKEKSRNAARSRRGK
ENLEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRSAGPQVGLA
PGRRGPVALVSEVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGS
SLFDYIHPGDHSEVLEQLGLRAPTPGPPTPPSVPSSSSSSSSSSSLADTPEIEASPIEVL
PSSRVQERSFFIRMKSTLTKRGLHVKASGYKVIHVTGRLRARALGLVALGHTLPPAPLAE
LPLHGHMIVFRLSLGLTILACESRVSDHMDLGPSELVGRSCYQFVHGQDATRIRQSHLDL
LDKGQVMTGYYRWLQRAGGFVWLQSVATVAMSGKSPGERHVLWVSYVLSQAEGGQIPLDA
FQLPASVAHEDTSSPEPAPTEPEPPVEGKEAVPPQEDKAPQPRGKPIKVEPGRGETEDPE
DSGDEKPSGHLAPTRPEFTSVIRAGALKQDLVGPWGLAPPGDPPPSLLHTGFLPPVVRGL
CAPGTIRYGPAELGLVYPHLQRLGPGPTLPEAFYPALGLPYPGPLGTRVQRKGD
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcggccccctaccccagcagtggcggtggaggcgaggtcaggtgcgggggaggtcgc
ggcggcagcgtcccttgggactttctgccggggtttgtggtcaagaccccgcccggaccc
tgcctgcaggcgcagcgcaaggagaagtcccgtaacgcggcgcgctcacggcgcggaaag
gagaacctggagttcttcgagctggccaagctactcccgctgcccggagccatctccagc
cagctggacaaggcgtccatcgtgcgcctcagcgtcacctacctccgcctgcgccgcttc
gccgctctcggggcgccaccctgggggttgaggtccgcggggccgcaggttggcctagcc
ccaggccgcaggggccccgtggcgctggtctccgaagtcttcgagcagcacctgggagga
cacatcctgcagtccctggacggcttcgtgtttgccttgaaccaggaagggaagttcctc
tacatctcagagacagtctccatttatctgggtctctcacaggtggagctgacgggcagc
agcctcttcgactacattcatccgggggaccactccgaggtgctggagcaactggggttg
cgggccccgacccccgggccccccaccccgccctccgtcccctcctcttcctcctcctcg
tcctcgtcctcctcgcttgcggatacccctgagatcgaggccagccccatcgaggtgctc
ccctcctcccgggtccaggagcgctccttcttcatccgcatgaaatccaccctcaccaag
agggggctgcacgtcaaggcctcagggtacaaggtcatccatgtgaccggtcgccttcgg
gcccgcgccctgggccttgtggcccttggccacacgttgcccccggccccactggctgag
ctgccactgcacggacacatgatcgtcttccgactcagcctgggtctcaccatccttgct
tgtgagagcagagtcagcgaccacatggacctggggccctcggagctagtgggccgcagc
tgctaccagtttgtccacggacaggatgcaaccaggatccgccaaagccacctggacctg
ctggacaagggccaggtgatgaccggttactaccgttggctgcagcgcgccgggggcttc
gtgtggctacagtccgtggccaccgtggccatgagcgggaagagccctggagagcgccac
gtgctctgggtcagctacgtgctcagtcaagccgaggggggccagatacctctggacgcc
ttccagcttccggccagcgtggcccatgaggacacgtccagcccggagccagcacccaca
gagccagagccaccagtggaaggaaaggaggccgtccccccgcaggaggacaaggccccc
cagccccggggcaaacccatcaaagtggagcccggccggggggagactgaagacccggag
gacagtggggatgagaagccgtccggccacctggccccaacgaggcccgagttcacgtcc
gtcatccgggcgggtgccctgaagcaggacctggtggggccgtggggcctggcgcctcct
ggggaccccccaccttccctcctgcacactggcttcctgccccccgtggtgcggggcctg
tgcgcacctggcaccatccgctacggccctgccgaactgggcctcgtgtacccgcacctg
cagaggctgggcccgggccccaccctccccgaggccttctaccccgcgctgggcctgccc
tacccggggcccctgggcaccagggtgcagcggaagggggactga
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