Globicephala melas (long-finned pilot whale): 115862277
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Entry
115862277 CDS
T11080
Symbol
SIX5
Name
(RefSeq) homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115862277 (SIX5)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
115862277 (SIX5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
115862277
NCBI-ProteinID:
XP_030729713
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All DBs
Position
19:9370068..9374229
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AA seq
733 aa
AA seq
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MATLPAEPSAGPAAGGEAVAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGEAAVKV
EGPGSPGVPGSPPEAAADPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLR
GSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALG
AVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLS
LTQVSNWFKNRRQRDRTGGGGGAPCKSESDGNPTTEDESSRSPEDLERGAAPVAAEAPAQ
GSIFLAGAAPPAPCPASSSILVNGSFLAAGSSPAVLLNGSPVIINSLALGEASSLGPLLL
GGGGGAPAPQPSPQGASEGKTSLVLDPQTGEVRLEEAQPEAPETKGAQVAASGPPGEEVP
GPLPQVVPGPPPAATFPLPPGPVTSVAAPQVVPLSPPPGYPAGLGPTSPLLNLPQVVPTS
QVVTLPQAVGPLQLLAAGPGSPVKVAAAPGPANMHLINSGVGVTALQLPSATAPGNFLLA
NPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLSPAPSLALPLKPDAAISVPEGALPV
APSPALPEAHALGALSAQPPPAPAAASLPFSPDSSGLLPGFQAPPPEGLLLSPAAVPIWP
AGLELSAGTEGLLEAEKGLGTQAPHTVLRLPDPDPEGLLLGATAGGEVDEGLEVETKVLT
QLQSVPVEEPLEL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttgcctgcggagccgagcgcggggccggcggctgggggggaggcggtggcg
gcggcggcgaccgaagaggaggaggaggaagcgcgccagcttctgcagactttgcaggcg
gccgagggtgaggcagcggcggcggccggggccggggcgggcgaagcggcggtgaaagtg
gagggcccgggatccccgggcgtacccgggtcgccccccgaggccgctgccgatccgccc
acgggtctccgcttctcgccggaacaggtggcgtgcgtgtgcgaggcgctgctacaggcg
ggccacgccggccgcttgagccgtttcctgggcgcactgcccccggccgagcgcctacgt
ggcagcgatccggtgctgcgcgctcgggccctggtggccttccagcggggcgagtacgcc
gagctctaccggctgctcgagagccgccccttccccgccgcccaccacgcgtttctgcag
gacctctacctgcgcgcgcgctaccacgaggccgaacgggcccgcggccgcgcgctgggc
gcggtggacaagtaccgtctgcgcaagaagttcccgctgcccaagaccatctgggacggc
gaagagaccgtctactgcttcaaggagcggtcccgcgccgcgctcaaggcctgctatcgc
ggcaaccgctaccccacgccggacgagaagcgccgcctggccacgctcaccggcctctcg
ctcacgcaggttagcaactggttcaagaaccgacgacagcgcgaccggaccgggggcggc
ggcggcgcgccctgcaagagcgaatctgatgggaacccgactacggaggacgagtccagc
cgcagccctgaggacctggagaggggggcggctccagtggcggccgaggcccccgcccag
ggctccatattcctggccggggccgcccctcccgcgccgtgccccgcctcctcctccatc
ctggtgaacgggagcttcctggccgctggcagctctccagcggtgctcctcaatgggagc
cccgtcatcatcaacagcctggccctgggcgaggcctccagcctgggccccctgctgctc
ggcgggggcgggggagcccctgcaccgcagcccagcccccagggggccagcgagggcaag
acctccctggtcctggaccctcagactggggaggttcgcctggaggaggctcagcctgaa
gcccctgagaccaagggggcccaggtggctgcttcagggccgcctggagaggaggtccca
gggcctctgccccaagtggtgcctgggcccccgccggctgccacctttcctctgccccca
ggaccagtgacttccgtggctgctccacaagtggtgccactttccccaccccctggctac
cctgctggcctgggccccacctccccactgttgaacctgccccaggtggtgcccacctcc
caggtggtgaccttgcctcaggctgtggggccactgcagctgttggcagctgggccaggc
agccccgtgaaggtggcagctgccccgggccctgccaacatgcacctgataaactctggg
gtgggcgtgactgccctgcagctgccttcggccactgccccaggaaacttcctgctggcc
aaccccgtgtctggcagccccatcgtgacaggtgtggccgtgcagcagggcaagatcatc
ctcaccgccaccttccccaccagcatgctggtctcccaggtcctgtcgccggcccccagc
ctggccctgcccctgaagccagacgcggccatctcagtccccgaaggagccctcccggtg
gcccccagccccgctctgccagaggcccacgccttaggcgcactgtctgcgcagccgccc
cccgccccggccgccgccagtctgcccttctccccagactcctccggcctcctgcccggc
ttccaggcgcccccgcccgaggggctcctgctgtcgcctgcggcggtgcccatctggcca
gccgggctggaactgagcgccggcactgaggggctgctagaggcagagaaggggctgggg
acgcaggccccccacacggtgctgaggctgccggaccccgaccccgaggggctgctcctg
ggggccacggcggggggcgaggttgacgaggggctggaagtggagaccaaggtcctgacc
cagttacagtcggtgcctgtggaagagcccttggaactgtga
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