KEGG   Globicephala melas (long-finned pilot whale): 115862358
Entry
115862358         CDS       T11080                                 
Symbol
XRCC1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    115862358 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gmf03400]
    115862358 (XRCC1)
DNA repair and recombination proteins [BR:gmf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     115862358 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 115862358
NCBI-ProteinID: XP_030729921
LinkDB
Position
19:10904571..10929109
AA seq 628 aa
MPEIRLRHVVSCSSQDSTYCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI
GNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSGSNSNRVRIFGPDKLVRAA
AEKRWDRVKIVCSQPYSKDAPYGLSFVRFHSPPDKEEAEASSQKVTKLGQFRVKEEDESA
SSLRPGALFFSRINKTPPVAASDPAGPSYAAATLQASSAASSASPASKTVGSTSKESPRG
KRKLDLSHEEKKTPSKPSAQPSPPALKRTKLSAPTPTPATAPVPAAARGAAPGKPRGEGA
EPRAPRAGPQELAKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLICAF
ANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGPDSSSEDEGGSHGGSSGDE
APKPPGKRLQTKAKPSQAAGPSSPQRPPTPEETKPPSPGPQEDTDTKGEQSEGQDNGAED
SGDTEDELRRVAEQKEQRPPSGEENGKDPYAGSTDENTDNEGPPESPNLPIPELPDFFQG
KHFFLYGEFPGDERRTLSRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPSLV
FVRPRWIYSCNEKQKLLPHQLYGVVPQA
NT seq 1887 nt   +upstreamnt  +downstreamnt
atgccggagatccgcctccgccatgtggtatcctgcagtagccaggactcgacctactgt
gcagaaaaccttctcaaggcagacacttaccgaaagtggcgcgcggccaaggcgggcgag
aagaccatctctgtggtgctccagttagagaaggaagagcagatacacagcgtggacatc
gggaacgacggctcggccttcgtggaggtgctggtgggcagctcagctggaggggccgga
gagcaggactacgaggtccttctggtcacttcgtctttcatgtccccttccgagagtcgc
agtggctcaaattccaaccgcgttcgcatctttgggcccgacaaattggtccgggcagca
gcagagaagcgctgggaccgcgtcaaaattgtctgcagccagccctacagcaaggatgcc
ccctatggcctgagttttgtaaggtttcacagccccccagacaaagaggaggccgaggcc
tcatcccagaaagtgaccaagctcggccagttccgcgtgaaggaggaggatgagagcgcc
agttccctgagacccggggctctcttcttcagccggatcaacaagacccctccagtcgca
gccagtgacccagcaggacccagctatgcagctgctacactgcaggcctccagtgccgcc
tcctctgcctctccggcctccaagacagtaggcagcacctccaaggagtcccccagaggc
aagaggaagctggatttgagccacgaagaaaagaagacccccagcaaaccatccgcccag
ccctcaccacccgccctcaagagaaccaaattgtcagctcccacccctaccccagccact
gcccctgtccctgccgcagcacggggggcggcgccagggaagccccgaggagaaggtgcc
gagcccagggccccccgcgccggcccgcaggagctggcgaagatcctccagggtgtggtg
gtggtgctgagcggcttccagaaccccttccgctcggagctccgggacaaggccctggag
ctgggggccaagtatcggccagactggactccagacagcacccacctcatctgcgccttt
gccaacacccccaagtacagccaggtcctaggcctcggaggccgaatcgtgcggaaagag
tgggtgctggactgtcaccgcatgcggcggcggctgccctctcggaggtacctcatggct
gggccagactcgagcagcgaggacgaggggggctctcatggcggcagcagtggggatgaa
gcccccaagcctcccggaaagcgcctccagaccaaagccaagccctctcaggcagcagga
cctagctcaccgcagagacccccaaccccagaagagaccaaaccaccctcaccagggccc
caggaagatactgacaccaagggggagcagtcagaaggacaggacaatggggcagaagat
tctggggacaccgaggacgagctgagaagggtggctgagcagaaggaacaaaggccgccc
tctggcgaggagaatggcaaggacccgtacgcaggatccacggatgagaacacggacaat
gaaggtcccccggagtctcccaatctgccgattcccgagctcccagactttttccagggc
aaacacttcttcctgtacggggagttcccgggggatgagcggcggacgctcagccgttac
gtcacagccttcaacggggagcttgaggactatatgagcgaccgggtccagtttgtgatc
acggcacaggagtgggaccccagctttgaggaggccctgatggacaacccctccctggtg
ttcgtccggccccggtggatctacagttgcaacgagaagcagaagttgcttccccaccag
ctctacggggtggtgccccaggcatga

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