Globicephala melas (long-finned pilot whale): 115862422
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Entry
115862422 CDS
T11080
Symbol
LTBP4
Name
(RefSeq) latent-transforming growth factor beta-binding protein 4 isoform X1
KO
K08023
latent transforming growth factor beta binding protein 2/3/4
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmf04990
]
115862422 (LTBP4)
Domain-containing proteins not elsewhere classified [BR:
gmf04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
115862422 (LTBP4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
EGF
hEGF
FXa_inhibition
EGF_2
Plasmod_Pvs28
EGF_C8A_B_C6
Motif
Other DBs
NCBI-GeneID:
115862422
NCBI-ProteinID:
XP_030730080
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All DBs
Position
19:complement(12251625..12278161)
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AA seq
1628 aa
AA seq
DB search
MRLPGPSGRRPLLLVLLLSLLAAAASAAHAAGPSPSQAVEVAVIPGRPAGVAACRCCPGR
SPRRSRCFRASCRVQSCRPKKCAGPQWCLTPVPPELSSPSLSVRKKQVSLNWQPLTLQEA
RALLRRRRPRGPGARALLRRRPPQRAPAGQSRVLCPLICHNGGVCVKPDRCLCPPDFAGK
FCQLHSSGARPPAPAMPGFTRSVYTMPLANHRDDEHGVASMVSVHVEHPQEASVVVHQVE
RVSGPWEESDAEAVARAEAAARAEAAAPYTVLAQSAPREDGYSDASGFGYCFRELRGGEC
ASPLPGLRTQEVCCRGAGLAWGVHDCQSCSELLGNSDQVGVPDGPCPTGFERVNGSCEDV
DECETGGRCQHGECANTHGGYTCVCPDGFLLDSSRSSCISQHVISEAKGPCFRVLRDGGC
SLPILRNITKQICCCSRVGKAWGRGCQLCPPFGSEGFREICPAGPGYHYSASDLRYNTRP
LGQEPPRVSLSQPRAPSSTSRPRTGFLPTHRPEPRPESRLEPRPEPRPGPELPLPSIPAW
TGPEIPESGPSAGECQRNPQVCGPGRCIPRPSGYTCACDSGFRLSPQGMRCIDVDECRRI
PTPCAPGRCENTPGSFRCVCGPGFRAGPRGAECLDVDECHRVPPPCDRGRCENTPGSFLC
VCPAGYQAAPHGASCQDVDECIQSPGLCGRGLCENLPGSFHCVCPAGFRGSACEEDVDEC
AQEPPPCGPGRCDNTAGSFHCACPAGFRSHGPGAPCQDVDECARSPPPCTYGRCENTEGS
FQCVCPTGFQPSATGSECEDVDECEKHLACPGQECVNSPGSFQCRACPAGHHLHHGRCTD
VDECRSGASCGPHGHCTNTEGSFRCTCAPGYRAPPGRPGPCADVNECLEGDFCFPNGECL
NTDGSFACTCAPGYRPGPRGASCLDVDECSEEDLCQSGICTNTDGSFECVCPPGHRAGPD
LASCLDVDECRERGPALCGSQRCENSPGSYRCVRDCDPGYHAGPEGTCDDVDECQEYGPG
ICGAQRCENTPGSYRCTPACDPGYQPTPGGGCQDVDECRNRSFCGDHAMCQNLPGSFQCL
CDQGYEGARDGRHCVDVNECETLQGVCGAALCENVEGSFLCVCPNSPEEFDPMTGRCVPP
RTSAGTFPGPQPHVPASPSLPARLPPPPSRRPSPPRQGSVGSGRRECYFDTAAPDACDNI
LARNVTWQECCCTVGEGWGSGCRIQQCPSTETAEYQSLCPHGRGYLAPSGDPSLRRDVDE
CQLFRDQVCKSGVCVNTAPGYSCYCSNGYYYHAQRLECIDNDECADEEPACEGGRCVNTI
GSYHCTCEPPLVLDGSGRRCVSNESQSLDDNLGVCWQEVGADLVCSRPRLDRQATYTECC
CLYGEAWGMDCALCPAQDSDDFEALCNVLRPPSYGPPRPGGFGLPYEYGPDLGSPYQGLP
YGPELYLPPVLPYDPYPPPPGPFARREAPYGTPPFDMPDFEDDGGPYGESEAPAAAGPGS
RWRYRSRDTRGSVPEPEESPEGGSYAGAQAGPYEGLEAEECGILDGCAHGRCVRVPEGFT
CDCFDGYRLDMTRMACVDINECDEAEAAAQLCVNARCVNTDGSFRCICRPGFAPSHEPHH
CTPARPRA
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atgcggctgcctggccccagcggccgccgccccctcctgctggtgctgctgctgtctctc
cttgcagccgccgcctccgccgcccacgccgccggccccagccccagccaggccgtcgag
gttgcggtaatcccgggccgcccggccggtgttgctgcttgtcgctgctgcccaggccga
tcgcccaggaggagccgctgcttcagagcctcctgcagggtccagagctgccggcccaaa
aagtgtgcaggtcctcagtggtgcctgactccagtgcccccagagctgtcaagccccagc
ctcagcgtgaggaagaaacaggtgtcccttaactggcagccactgacgctgcaggaagcc
cgagctctgctgaggcgacggcggccccgcgggccgggggcccgggcattgctgagaagg
aggcccccacagcgagcccctgccggccagtcccgggtcctgtgtcccttgatctgtcac
aacggaggtgtgtgcgtgaagcctgaccgctgcctctgtcccccggacttcgctggcaag
ttctgccagttgcactcatcgggcgcccgacccccggccccggccatgccaggcttcacc
cgctctgtgtacaccatgccactggccaaccaccgtgacgatgagcatggcgtggcgtct
atggtgagtgtccacgtggagcacccgcaggaggcgtcggtggtggtgcaccaggtggag
cgtgtgtccggcccttgggaggagtcggacgccgaggcagtggcgcgggcggaggcggcg
gctcgggcggaggcggcagcgccctacacggtgctggcacagagcgcgccgcgcgaggac
ggctactcggacgcctcgggcttcggttactgctttcgggagctgcgcggaggcgaatgt
gcgtccccgctgcccgggctccggacgcaggaagtctgctgcagaggggccggcttggcc
tggggcgttcacgactgtcagtcgtgctcggagctcctgggtaactccgaccaagtgggc
gtcccagatggaccgtgtccaactggctttgaaagggttaatgggtcctgcgaagatgtg
gatgagtgcgagactggcgggcgctgccagcacggggagtgtgcgaacacgcatggcgga
tacacctgcgtgtgccccgacggctttctgcttgactcgtcccgcagcagctgcatctcc
caacacgtgatctcagaggccaaggggccctgcttccgcgtgctccgcgacggcggctgc
tcgctgcccattctacgcaacatcaccaaacagatctgctgctgcagccgcgtaggcaaa
gcctggggccggggttgccagctctgcccaccctttggctcagagggttttcgggagatc
tgcccagctggccctggctaccattactcggcctctgacctccgctacaacaccagaccc
ctgggccaggaaccaccccgagtgtccctcagccagccccgtgccccatcctccacctcc
cggccacgcacaggctttctgcccactcaccgcccagaaccccggcctgagtcacggcta
gaaccgaggccagagccccgtccgggccctgagctccccctgcccagcatccctgcctgg
actggtccggagatccctgaatcaggtccctctgcaggcgagtgtcaacgtaatccccag
gtctgcggcccgggacgctgcattccccggcccagtggctacacctgcgcgtgcgactcc
ggtttccggctcagcccgcagggcatgcgctgcattgacgtggacgaatgtcgccgcatt
cccacgccttgtgctcccgggcgctgcgaaaacacgccaggcagcttccgttgcgtgtgc
gggccgggcttccgagctggcccgcggggtgcggagtgtctggacgtggacgagtgccac
cgcgtgccgccaccctgtgaccgtgggcgctgcgagaacacgccaggcagcttcctgtgc
gtgtgccccgctgggtaccaggctgcgccccacggagccagctgccaggatgtggatgaa
tgcatccagagcccaggcctgtgcggccgagggctctgtgagaacctgcccggctctttc
cactgtgtgtgcccggctggcttccggggctcagcgtgtgaagaggatgtggatgagtgt
gcccaggagccaccaccctgtgggccaggccgttgtgacaacacagcaggctcctttcac
tgtgcctgccctgctggcttccgctcccatgggccgggggccccctgccaagatgtggat
gagtgtgcccgtagccccccgccctgcacctatggccggtgtgagaacacagaaggcagc
ttccagtgcgtctgccccacgggcttccaacccagtgctaccggctctgagtgcgaggat
gtggatgagtgtgagaagcacctggcatgtcctgggcaggagtgtgtgaactcacctggc
tccttccagtgcagggcctgtcctgctggtcaccacctgcaccatggccgatgtactgat
gtggatgaatgccgttcgggcgcctcctgcggcccccatggccactgcactaacactgaa
ggctccttccgctgcacctgcgcgccaggctaccgggcaccacctggtcggcccgggccc
tgcgcagacgtgaacgagtgcctggagggcgacttttgcttccccaacggcgagtgcctc
aacaccgacggctcctttgcctgtacttgtgctcccggttaccggcccggacctcgcgga
gcctcttgcctcgacgtggacgaatgcagcgaggaggacctctgccagagcggcatctgt
accaacaccgacggctctttcgagtgcgtctgtcctccaggacaccgcgctggcccagac
ctcgcctcctgcctcgacgtggacgaatgtcgggagcggggcccggccttgtgcgggtcc
cagcgttgtgagaattcccccggctcctaccgctgtgtccgcgactgcgaccctggctac
cacgcaggccctgagggcacctgtgacgacgtggatgagtgccaggaatatggcccaggg
atttgtggagcccagcgctgtgagaatacccctggctcctaccgctgcacaccggcctgt
gaccctggctaccagcccacgccagggggcggatgccaggatgtggacgaatgccggaac
cggtccttctgcggggaccatgccatgtgccagaacctgcctggctccttccagtgcctc
tgtgaccagggctacgagggggcgcgggacgggcgtcactgcgtggatgtgaatgaatgt
gaaacgctgcagggtgtgtgtggagctgccctgtgtgagaatgtggaaggctccttcctc
tgtgtctgccccaacagccctgaggagtttgaccccatgactgggcgctgtgttccccct
cggacgtctgctggcacgttcccgggcccgcagccccacgtacccgccagccccagtctg
ccagccaggctcccaccacccccgtcccgccggcccagcccacctaggcagggctctgtg
ggcagcgggcgccgggagtgctacttcgacacggcggctccggatgcatgtgacaacatc
ctggctcggaacgtgacgtggcaggagtgctgctgcactgtgggtgagggctggggcagc
ggctgccgcatccagcagtgcccaagcaccgagacagctgaataccagtcattgtgcccc
cacggccggggctacctggcgcccagcggagacccgagccttcggagagacgtggacgag
tgccagctcttccgagaccaggtgtgcaagagtggcgtgtgcgtgaacacggccccaggc
tactcatgttattgcagcaatggctactactatcacgcccagcgcctggagtgcatcgat
aacgacgaatgcgcagacgaggagccagcctgtgagggcggccgctgcgtcaataccata
ggctcttatcattgcacgtgcgagcccccacttgtgctggacggctcggggcgccgctgc
gtctccaacgagagccagagcctcgacgacaatctgggagtgtgctggcaggaagtgggg
gctgacctcgtgtgcagtcgccctcggctggatcgccaggccacctacacagagtgctgc
tgcctctacggcgaggcctggggcatggactgtgccctctgcccagcacaggactcagat
gactttgaggccctgtgcaatgtgctgcgccccccctcatatggacccccgcggccaggt
ggctttggactcccctacgagtatggcccagacctaggttcaccttaccagggccttccg
tacgggcctgagttgtacctgccacccgtcctaccctatgacccctacccaccgccacct
gggcccttcgcgcgccgggaggccccctacgggacgccacccttcgacatgcccgacttc
gaggacgatggtggcccctacggtgaatccgaggctcctgcagctgccggcccgggctcc
cgctggcgctatcggtcccgcgacacccgtggctccgtcccagagcctgaggagtcgcct
gaaggtggaagctatgctggcgcccaggctgggccctacgaagggctggaggcggaggag
tgcgggatcctggacggctgcgcccacggccgatgtgtgcgtgtccccgagggcttcacc
tgcgactgcttcgacggctaccgcctggacatgacccgcatggcctgcgtcgacatcaac
gagtgtgacgaggccgaggcggccgcccagctctgcgtcaacgcgcgctgcgtcaacacg
gatggctcgttccgctgcatctgccgcccaggattcgcaccctcgcacgagccgcaccac
tgcacgcccgccaggccccgggcctga
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