Globicephala melas (long-finned pilot whale): 115862841
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Entry
115862841 CDS
T11080
Symbol
THSD4
Name
(RefSeq) thrombospondin type-1 domain-containing protein 4 isoform X1
KO
K23377
thrombospondin type-1 domain-containing protein 4
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115862841 (THSD4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gmf04990
]
115862841 (THSD4)
Domain-containing proteins not elsewhere classified [BR:
gmf04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
115862841 (THSD4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
TSP_1
TSP1_CCN
ADAMTS_CR_3
PLAC
TSP1_spondin
Motif
Other DBs
NCBI-GeneID:
115862841
NCBI-ProteinID:
XP_030730945
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All DBs
Position
2:complement(62688584..63316930)
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AA seq
1017 aa
AA seq
DB search
MVSCFLESLSVLGSLLLLGFQLVCPQPSTEHRKVPQRMAVAEGAPEDGGGGAPGVWGAWG
PWSACSRSCSGGVMEQTRPCLPGSYRARGGPPPGAPARAFAGHVVSAVRTSVPLHRSREE
PRAPASLNSSRQGPAQRGSRHPQARGREPTAERRSRTRGPIGPGMYGYGKAPYILPLQTD
SAHLPQRLRRQRPSSRNSRSQGASGSSHGYNPPALRAPRHGPLYQSDSGPRPGLQVSEGS
IYQLPLTHDQGFPEASNLFHNPETSSSPGLGAHRAAQSFSQPARSTAISCIGAYRQYKLC
NTNVCPESSRSIWEVQCASYNNKPFMGRFYEWEPFAEAKGNRKCELNCQAMGYRFYVRQA
EKVIDGTPCDQNGTAICVSGQCKSIGCDDYLGSDKVVDKCGVCGGDNTGCQVVSGVFKHA
LTSLGYHRVVEIPQGATKINITEMYKSNNYLALRSRSGRSIINGNWAIDRPGKYEGGGTM
FTYKRPNEISSTAGESFLAEGPTNEILDVYMIHQQPNPGVHYEYVIMGNNAISPQVLPHR
RPGEPFNGQLVPEGGNQQEGEGKEGDEEKADVHGGAPEIFTSESAQTFPVRHPDRFSPHR
PDNVVPPAPQTPRRSRDHNWKQLGTTACSTTCGKGSQYPIFRCVNRNTHEEVPESYCDSS
MKPTPEEEPCNIFPCPAFWDIGEWSECSKTCGLGMQHRQVLCRQVYANRSLTVQPYRCQH
LEKPETTSTCQLKICSEWQIRTDWTSCSVPCGVGQRTRDVKCVSNIGDVVDDEECNMKLR
PNDIENCDMGPCAKSWFLTEWSERCSAECGAGVRTRSVVCMTNHVSSLPLEGCGNNRPVE
ATPCDNGPCTGEVEWFVGSWSQCSIECGSGTQQREVICVRKNADTFEVLEPYECSFLERP
PSQQSCHLKPCGAKWFNTEWSMCSKSCQGGFRVREVRCLSDEMTLSNLCDPQLKPEEKES
CNPQDCVPEVDENCKDRYYNCNVVVQARLCVYNYYKTACCVSCTRVANRHSGFLGSR
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggtttcctgtttcctggagtctctcagtgtcctgggttccctcctgctgcttggattc
cagctcgtctgcccacagccctccactgaacacagaaaggtcccgcagcggatggcggtg
gccgagggcgctcccgaggacggcggcggcggcgccccgggcgtgtggggcgcgtggggc
ccctggtccgcctgctcgcgcagctgcagcggcggcgtgatggagcagacgcgaccctgc
ctgcccggctcgtaccgcgcacgcggcggaccgccgcccggagcccccgcgcgcgccttc
gcaggccacgtggtgtcagccgtgcgtacgtcggtgccgcttcacaggagccgcgaggag
ccacgcgcccccgccagcctcaactccagccgccagggtccggcgcagcgaggtagccgg
cacccgcaggcccggggccgcgaacccacggcggagagaaggagcaggacccgaggtccc
atcggccccggcatgtatggctatggtaaggccccatacatcttaccactgcagacggac
tctgcacacctgccacagaggcttcggaggcagaggccctcatcccggaattccaggtcc
cagggggcatctggttctagccatggctacaaccctccagccctccgggccccccgacat
ggacctctgtaccagagtgacagtggacctcgtcctggactgcaagtctcggagggctcc
atctaccagctgcctttgacccatgaccaaggcttccctgaagcctcaaatctcttccac
aacccagaaacaagcagcagccctggcctgggggcccacagggcagctcagagcttctcc
cagcctgcccgatctacagcaatctcctgcattggggcctatcggcagtacaagctgtgc
aacacaaatgtgtgtccagaaagcagtagaagtatctgggaggtacaatgtgcatcctac
aacaacaagccgttcatgggccggttttatgaatgggaaccgtttgcagaagccaagggc
aatcggaagtgtgagctgaactgccaggcaatgggctaccgcttctacgtacggcaggcg
gagaaggtcattgatggtaccccctgtgaccagaacggcacggccatctgcgtgtctggg
cagtgcaagagcattggctgtgatgactacctaggctccgacaaagtcgtggacaaatgc
ggggtgtgcggaggcgataacacgggctgtcaggttgtgtcgggcgtgtttaagcatgcc
ctcaccagcctgggctaccaccgagttgttgagattcctcaaggagccacaaaaatcaac
atcaccgagatgtacaagagcaacaactatttggccttgcgaagtcgttctggccgctcc
atcatcaacgggaactgggcaattgaccggcctggaaaatatgaaggaggagggaccatg
ttcacatacaagcgaccaaatgagatttcgagcactgccggagagtcctttttggccgaa
ggtcccactaatgagatcttggatgtctatatgatacaccagcagcctaacccaggagtc
cactacgagtacgtaatcatggggaacaatgccatcagcccacaggtgctgcctcacagg
agaccaggggagcccttcaacggccagctggtaccagaaggggggaatcagcaggaggga
gaagggaaagagggggacgaagagaaggcagacgtgcacggcggggcacctgaaatattc
acctcggaatcagcacagaccttcccggtcaggcatcctgatagattctctccccaccgg
ccggacaatgtggtaccaccagcaccacagaccccacggcggagccgggatcacaactgg
aaacagctggggacaacggcatgctcgacaacctgcgggaaaggatcgcagtaccctatt
tttcgctgtgtgaacagaaacactcacgaagaggttcctgagagctactgtgactcgagc
atgaagccgaccccggaggaggaaccctgcaacatcttcccttgcccagccttctgggac
atcggggagtggtctgagtgcagcaaaacctgtggcctgggcatgcagcaccgccaggtt
ctgtgtcgccaggtgtatgccaaccgcagcctgacggtgcagccctaccgctgccagcac
ctggagaagcccgagaccaccagcacctgccagctcaagatctgcagcgagtggcagatc
cggacggactggacctcgtgctcggtgccctgcggagtggggcagaggacccgcgatgtg
aagtgtgtgagtaacatcggggacgtggtcgatgacgaggaatgcaacatgaaactccgg
cccaatgacattgagaactgcgacatgggaccctgcgccaagagctggttcctgacggag
tggagcgagaggtgctcggcagagtgtggggctggagtgcggacacgctcggtggtgtgc
atgaccaaccatgtcagcagcctgccgctggagggctgcgggaacaaccggccagtggag
gccaccccgtgtgacaacgggccctgcacgggcgaggtggagtggtttgtgggaagctgg
agtcagtgttccatcgagtgtgggagcgggacccaacagagggaggtgatttgtgttagg
aagaacgctgacacctttgaagtgctggaaccctatgaatgttccttcctggagagaccc
cccagccagcaatcctgccacctcaagccctgcggagccaaatggtttaacacagaatgg
agcatgtgttccaagagctgccagggcggcttccgcgtccgggaagtgcgctgtctgtct
gatgagatgaccctcagtaatctctgtgaccctcagttgaaaccagaagagaaagaatct
tgtaaccctcaggactgcgtccctgaagttgatgaaaactgcaaggacaggtactacaac
tgcaacgtggtggtccaggccaggctctgcgtctacaactactacaagaccgcctgctgc
gtctcctgcacgcgcgtggccaacaggcactcaggcttcctggggagcagataa
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