Globicephala melas (long-finned pilot whale): 115862907
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Entry
115862907 CDS
T11080
Symbol
IGDCC4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4 isoform X2
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmf04515
]
115862907 (IGDCC4)
Cell adhesion molecules [BR:
gmf04515
]
Immunoglobulin superfamily
DCC/UNC5 family
115862907 (IGDCC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Pur_ac_phosph_N
Ig_2
ig
V-set
FN3_DSCAM-DSCAML_C
Fn3_VIN3
Ig_RIMBP2
SusE
Motif
Other DBs
NCBI-GeneID:
115862907
NCBI-ProteinID:
XP_030731108
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All DBs
Position
2:68482114..68519914
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AA seq
1248 aa
AA seq
DB search
MARGDAGCGGRLLALTFCLLAARGEQPLPRKTTVSLSCGAGPLQVILGPEQATVLDCGLG
AATAGHPLSVTWSKDGGILPEHSHLRLLPNGSLWLSQLPAPDGTDPGASEVIEGNYSCLA
RSPVGVVASQAAVVKLATLAGFSLHPQSQMVEENGTARFQCHIEGLPAPVITWEKDQVTV
PEEPRLITLPNGVLQILDVQKDDAGSYRCVATNSANQRFSQEALLRVAHRGSLASIGGQD
VVIVAAPENTTVVSGQSVVMECVASADPTPFVSWVRQDGKPISTDVIVLGRTNLLITSAQ
PRHSGVYVCRANKPRTRDFATAAAELRVLAAPVISQAPEALSRTRASTARFVCRAFGEPR
PTLRWLHDGEPLRPNGRVKVQGGGGSLVITQIGLQDAGYYQCVAENGAGTACAAAPLAVV
VREGLPSAPTRVTATPLSSSAVLVAWERPELHSEQIIGFSLHYQKARGMDNVEYQFAVNN
DTTELQVRDLEPNTDYEFYVVAYSQLGASRTSTPALVHTLDDVPSAAPQLSLSSPNPSDV
RVVWLPLPPSLSNGQVVKYKIEYGLGKEDQIFSIEVPGNETQFTLNSLQPNKVYRVRISA
GTGTGYGAPSQWMQHRTPSVHNQSHVPFAPAELKVRARMESLVVSWQPPPHPAQISGYKL
YWREVGTDEEEADGEGPPGGRGDQAWDVGPVRLKKKVKQYELTQLVPGQLYEVKLVAFNK
HEDGYAAVWKGKTEKAPTPDLPIQRGPPLPPAHVHAESNSSTSIWLRWKKPDFTTVKIVN
YTVRFSPWGLRNASLVTYYTSSGEDILIGGLKPFTKYEFAVQSHGVDMDGPFGSVVERST
LPDRPSTPPSDLRLRPLTPSTVRLHWCPPSEPNGEIVEYLILYSSNRTQPEHQWTLLTTE
GNIFSAEVHGLESDTRYFFKMGARTEVGPGPFSGLQDVITLQEKLSDSLDVHSVTGIIVG
VCLGLLCLLACMCAGLRRGPHREALPGLSSMATAGNPTLYSRARLAPPSPPAAHELESLV
HPRPQDWSPPPSDIEDRAEVHSLMGGGGPDCRGHSKRKISWAQHGGLSWAGSWAGCELPQ
AGPMPSLTRALLPPAGTGQTLLLQALVYDAIKGNGRKKPPPACRNQVEAEVIVHSDFSAS
KGNPDLHLQDPEPEDPLPSEAADLTLGVMNLRQGADWLDRELGGCEQASPGPDRLTCLPE
AASASCPYPDLQPSEALQEAPGNSCQPKAPCPPAASPGLPRAPVSSSA
NT seq
3747 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggggggacgctggctgcggcggcaggctcctcgcgctgaccttctgcctgctg
gccgcgcgcggggagcagccgttgccccggaagacgaccgtgtcgctgagctgtggagca
gggccgctgcaagtgatcctgggcccggagcaagccacggtgctggactgcggtctgggg
gcggctactgcaggacaccccctcagcgtcacgtggagcaaggatggaggcatcctgccc
gagcacagccaccttcgcctgctacccaatggctccctgtggctgtcccagctgccagct
cccgacggcactgaccctggggcttcagaggtcattgagggcaactattcctgcctggcc
cgcagccccgttggagtggtggccagccaggctgcggtggtcaagcttgccacacttgca
ggtttctccctgcacccgcagtctcagatggtggaggagaatgggaccgctcggtttcag
tgccacatcgaagggctgccagcacctgtcattacttgggagaaggaccaggtgacggtg
cctgaggagcctcggctcatcacccttcccaatggggtcctccagatcctggacgttcag
aaagatgatgcaggctcctaccgttgcgtggccaccaactcagcaaaccagcgcttcagc
caggaggccctcctccgcgtggcccacagagggtccctggcatccatcggggggcaggac
gtggtcattgtggcagccccggagaacaccaccgtggtgtctggccagagtgtggtgatg
gagtgtgtggcctctgctgaccccacgccttttgtgtcctgggtccgacaggatgggaag
cccatctccaccgatgtcatcgtcctgggccgcaccaacttactaatcaccagcgcgcag
ccccggcactccggcgtctacgtctgccgagctaacaagccccgcacgcgcgacttcgca
accgcagccgcagagctccgcgtgctggccgcccctgtcatctcgcaggcgccggaggcg
ctgtcacggacgcgggcgagcaccgcgcgcttcgtgtgccgcgcgttcggggagccgcgg
cccacgctgcgctggctgcacgacggagagccgctgcggcccaacgggcgcgtcaaggtg
cagggcggcggcggcagcctggtcatcacgcagatcggcctgcaggacgccggctactac
cagtgcgtggccgagaatggcgcgggcacggcgtgcgccgccgcgcctctggcagtagtg
gtgcgcgaggggctgcccagcgctcccacgcgggtcaccgccacgccgctgagcagctcc
gccgttctggtggcctgggagcggcccgagctgcacagcgagcagatcatcggcttctcc
ctccactaccagaaggcacggggcatggacaatgtggaataccagtttgcagtgaacaat
gacaccactgagctacaggttcgggacctggaacccaacacagactatgagttctacgtg
gtggcctactcgcagctgggggccagccgcacctccaccccagcactggtccacacactg
gatgatgtccccagtgcagcgccccagctctccctgtccagccccaacccctcggacgtc
agggtggtgtggctgcccctgccccccagcctgagcaatgggcaggtggtgaagtacaag
atagagtacggtttgggaaaggaagatcagattttctccatcgaggtgccagggaatgag
acacagtttacactgaactcgcttcagcccaacaaggtgtatcgagtgcggatttcggcc
ggcacagggaccggctacggggccccctcccagtggatgcagcacaggacgcccagtgtg
cacaaccagagccacgtcccttttgcccctgcagagctgaaggtacgggcaaggatggag
tccctggtcgtatcatggcagccaccccctcaccccgctcagatctctggctacaaactg
tactggcgagaggtggggacagatgaggaggaggcagatggcgagggccctccagggggc
cgtggagaccaggcttgggatgtgggtcctgtccggctcaagaagaaagtgaagcagtat
gagctgacccagctagtccctggccagctgtacgaggtgaagctcgtggcattcaacaaa
cacgaggatggctatgcggcagtgtggaagggcaagacggagaaggctcccaccccagac
ctgcccatccagagagggccacccctgccacccgcccatgtccatgcggaatcaaacagc
tccacatccatttggcttcggtggaaaaaaccagacttcaccacagtcaagattgtcaac
tacacggtgcgcttcagcccctgggggctcaggaatgcctctctggtcacctattacacc
agctctggggaagacatcctcattggcgggctgaagccattcaccaaatacgagtttgcg
gtacagtcccacggcgtggacatggacgggcctttcggctccgtagtggagcgctccacc
ctgcctgaccggccctccacgcccccatctgacctgcgcctgaggcccctgacgccatcc
accgttcggctgcactggtgccccccctcggagcccaatggcgagatcgtggagtatctg
attctctacagcagcaaccgtacccagcctgagcaccagtggaccctgctcaccaccgag
ggaaacatcttcagtgctgaggtccacggcctcgagagcgacactaggtacttcttcaag
atgggggcgcgcacggaggtggggcctgggcccttctctggcctgcaggatgtgattact
ctccaggaaaagctctcagactctttggacgtgcactccgtcacgggcatcatcgtgggt
gtctgcctgggcctcctctgcctcctggcctgcatgtgcgctggcctgcgccgtggcccc
caccgggaagccctcccgggcctgtcctccatggccactgctgggaaccccacgctctac
tcccgagcccgccttgccccccccagccccccggctgcccatgaactggagtcccttgtg
cacccccgtccccaggattggtccccaccgccctcagacatcgaggacagggctgaagtg
cacagccttatgggtggtggcggtcctgactgccggggtcactccaagagaaagatctcc
tgggctcagcacggtgggctgagctgggcaggttcctgggcaggctgtgagctgccccag
gcaggccccatgccctctctgacccgggcgcttctgcctcctgctggaaccgggcagacg
ctgttgctgcaggctctggtgtatgacgccatcaagggcaatgggaggaagaagccgccc
ccagcctgcaggaaccaggtggaggccgaggtcattgtccactctgactttagtgcatcc
aaagggaaccctgacctccacctccaagacccggaacccgaggatccgctgccttcagag
gctgctgacctcactttgggtgttatgaatctcaggcaaggggcagactggctggacagg
gagctgggagggtgcgagcaggcaagccctgggccagacagacttacctgcctgccagag
gcagccagtgcttcttgcccctacccggatctccagcccagtgaggctctgcaggaggcc
ccggggaacagctgccagccaaaggccccctgccctccagcagccagcccaggcctgccc
agagccccagtctcctcctctgcttag
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