Globicephala melas (long-finned pilot whale): 115863364
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Entry
115863364 CDS
T11080
Symbol
EXOSC4
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115863364 (EXOSC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115863364 (EXOSC4)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115863364 (EXOSC4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
115863364 (EXOSC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
115863364
NCBI-ProteinID:
XP_030732108
LinkDB
All DBs
Position
17:79324560..79326554
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AA seq
245 aa
AA seq
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MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG
SRARALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAVLTQLHPRSQ
IDIYVQVLQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDGTALADLSHVEEAA
GGPQLALALLPSSGQIALLEMDARLHEDQLEQVLEAAAQAARDVHTLLDRVVRQHVQEAS
ILLGD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggcggggctggagcttctgtcggaccagggctaccgggtggacgggcggcgcgccggg
gagctacgtaagatccaggcgcggatgggtgtattcgcgcaggccgacggctcggcctac
atcgagcagggaaacaccaaggcgttagcggtggtctacgggcctcacgagatccggggc
tcccgggcacgagctctgcctgacagggccctggtgaactgtcagtacagttctgcgacc
ttcagcacaggtgagcgcaagcggcggccacacggggaccgtaaatcctgcgagatgggc
ctgcagctgcgtcaaaccttcgaggcagccgtccttacacagcttcatccacgctcccag
attgatatctatgtgcaggtgctgcaggcagatggtggcacctacgcggcttgtgtgaat
gcagccacgctggcagtgttggatgcagggatacctatgcgggactttgtgtgtgcctgc
tcagctggctttgtggatgggacagccctggcagacctcagccacgtggaggaagcagct
ggcggcccccagctggccctggccctgctcccgtcctcaggccagattgcactgcttgag
atggatgccaggctgcacgaggaccagctggagcaggtgctagaggctgctgcccaggcc
gcccgagatgtacataccctactggaccgtgtggtccggcagcacgtccaggaggcctct
atcttgctgggggactga
DBGET
integrated database retrieval system
