KEGG   Globicephala melas (long-finned pilot whale): 115863366
Entry
115863366         CDS       T11080                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog isoform X1
  KO
K12184  ESCRT-I complex subunit VPS28
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115863366
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmf04131]
    115863366
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gmf04147]
    115863366
Membrane trafficking [BR:gmf04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    115863366
Exosome [BR:gmf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115863366
  Exosomal proteins of other body fluids (saliva and urine)
   115863366
  Exosomal proteins of colorectal cancer cells
   115863366
  Exosomal proteins of bladder cancer cells
   115863366
SSDB
Motif
Pfam: VPS28
Other DBs
NCBI-GeneID: 115863366
NCBI-ProteinID: XP_030732111
LinkDB
Position
17:complement(79598796..79604263)
AA seq 221 aa
MFHGIPATPGMGAPGNKPELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDC
VSPNEYTAACSRLLVQYKAAFRQVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKD
DKGNLNRCIADVVSLFITVMDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTV
SQWLQTLSGMSASDELDDSQVRQMLFDLESAYNAFNRFLHA
NT seq 666 nt   +upstreamnt  +downstreamnt
atgtttcacgggatcccagccactcctggcatgggagcccctggaaacaagccggagctg
tatgaggaagtgaagctgtataagaatgcccgtgagcgggaaaagtatgacaacatggca
gagctgttcgcagttgtgaagacgatgcaggccctggagaaggcgtacatcaaggactgc
gtcagccccaacgagtacactgcggcctgctcacggctcctagtccagtacaaagctgcc
ttccggcaggtacaggggtcagagatcagctccatcgatgaattctgccgcaagttccga
ctggactgcccccttgccatggagaggatcaaggaggaccggcccatcaccatcaaggac
gacaagggcaacctgaatcgctgcattgccgatgtggtctcgctcttcatcacagtgatg
gacaagctgcgcctggagatccgggccatggacgagatccagcccgacctgcgggagctg
atggagaccatgcaccgcatgagccacctgccccctgatttcgagggccgccagacggtc
agccagtggctgcagaccctgagtggcatgtcagcctcagacgagctggacgactcccag
gtgcgccagatgctcttcgacctggaatcagcctacaacgccttcaaccgcttcctgcac
gcctga

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