Globicephala melas (long-finned pilot whale): 115863569
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Entry
115863569 CDS
T11080
Symbol
TRAPPC8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X4
KO
K20305
trafficking protein particle complex subunit 8
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115863569 (TRAPPC8)
Membrane trafficking [BR:
gmf04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
115863569 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_3rd
Ig_TPPC8_2nd
Ig_TPPC8_C
SNAP
Motif
Other DBs
NCBI-GeneID:
115863569
NCBI-ProteinID:
XP_030732342
LinkDB
All DBs
Position
13:42684540..42775739
Genome browser
AA seq
1435 aa
AA seq
DB search
MAQCVQSVQELIPDSFVPCVAALCSDEAERLTRLNHLSFAELLKPFSRLTSEVHMRDPNN
QLHIIKNLKIAVSNIITQPPQPGAIRKLLNDVVSGSQPAEGLVANVITAGDYDLNISATT
PWFESYRETFLQSMPASDHEFLNHYLACMLVTSSSEAEPMEQFSKLSQEQHRIQHNNDYS
YPKWFIPNTLKYYVLLHDVSAGDEQRAESIYEEMKQKYGTQGCYLLKINSRTPNRASDEQ
IPDPWSQYLQKNSIQNQESYEDGPCTITSNKNSDSNLLSLDGLDNEVKVDGLPNNFRTHP
LQLDPSGDSSNSIDGPDHVKSASSLHETKKANAGIIHGACLTLTDHDRIRQFIQEFTFRG
LLPHIEKTIRQLNDQLISRKGLSRSLFSATKKWFSGSKVPEKSINELKNTSGLLYPPEAP
ELQIRKMADLCFLVQHYDLAYSCYHTAKKDFLNDQAMLYAAGALEMAAVSAFLQPGAPRP
YPAHYMDTAIQTYRDICKNMVLAERCVLLSAEILKSQSKYSEAAALLIRLTSEDSDLRSA
LLLEQAAHCFINMKSPMVRKYAFHMILAGHRFSKAGQKKHALRCYCQAMQVYKGKGWSLA
EDHINFTIGRQSYTLRQLDNAVSAFRHILINESKQSAAQQGAFLREYLYVYKNVSQLSPD
GPLPQLPLPYINSSATRVFFGHDRRPADGEKQAATHVSLDQEYDSESSQQWRELEEHVVA
VVNRGVLPSNFHPTEYCLNSYSDNSRFPLTVVEEPITVEVAFRNPLKVPLLLTDLSLLWK
FQPKDVSGKENEVKELVKGEPEMIGTEVVSEFLINSEESKVARLKLFPHHIGELHILGVV
YNLGTIQGSMTVDGIGALPGCHTGKHSLSMSVRGRQDLEIQGPRLNNTKEEKTSIKYGPD
RRLDPIITEEMPLLEVFFIHFPTGLLCGEIRKAYVEFVNVSKCPLTGLKVVSKRPEFFTF
GGNTAVLTPLSPSASENCSAYKTVVTDSTSVCTALISSASSVDFGIGIGSQPEVIPVPLP
DTVLLPGASVQLPMWLRGPDEEGVHEINFLFYYESVKKQPKIRHRILRHTAVICTSRSLN
VRATVCRSNSLEDEEGRGGNMLVFVDVENTNTSEAGVKEFHIVQVSSSSKHWKLQKSVNL
SENKDAKLANREKGKFCFKAIRCKEEEVATQSSEKYTFADIIFGNEQIVSSASPCADFFY
RSLSSELKKPQAQSSLHTEKQSIEDTMRLIQKCNEVDLNIVVLWKAYVVEDSKQLILEGQ
HHVVLRTIGKEAFSYPQKQEPPEMELLKFFRPENTTVSSRPSVEQLSNLIRTSLHYPESF
SHPFHQKSLCLVPVTLLLSNCSKADVDVIVDLRHKTTSPEALEIHGSFTWLGQTQYKLHL
KSQELHSLQLKACFVHTGVYNLGTPRVFAKLSDQVTVFETSQQSSMPALIIINNV
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgtgtacaatcagtgcaggagctcatcccggactccttcgtcccctgtgtc
gccgcgctgtgtagcgacgaagccgagcggctcactcgtctcaatcaccttagcttcgcg
gagttgcttaagcccttctctcgcctcacttctgaggttcatatgagagatcccaataat
cagcttcacataatcaaaaacttgaagatagcagtaagcaacattatcacccaaccacct
cagcctggagccattcggaagcttttgaatgatgttgtttctggcagtcagccagcagaa
ggattagtagcaaatgtgattacggcaggagattacgacctcaacatcagtgctactact
ccatggtttgagtcttacagagagacctttcttcagtcgatgccagcatcagatcatgaa
tttctgaaccactatttagcatgtatgttggtgacatcgtctagtgaagctgaacctatg
gaacagttttcaaagttgtcacaagaacagcatcgaattcagcacaacaatgattattcc
taccccaagtggtttataccaaatacacttaaatattatgtacttttacatgatgtaagt
gcaggagatgaacagagagctgaatcaatttatgaagaaatgaaacagaaatatggaact
cagggttgctatttacttaaaattaattctcgaacacctaatcgagcgtcagatgaacag
ataccagatccttggagtcagtatctccagaaaaatagtattcaaaaccaggaatcatat
gaagatggcccttgtactataacttcaaataagaattctgatagtaacttgctttcattg
gatggattagataacgaagtcaaagtagatggcttaccaaacaactttagaactcacccg
cttcaattggacccatctggtgactcttctaacagcattgatggcccagatcatgtaaaa
tctgcttcatcattacatgaaacaaagaaagcaaatgctggaattattcatggtgcatgt
ttaacccttactgatcatgatagaattcgacagtttatacaagagttcacatttcggggc
ctcttgccacatatagagaaaacaattcggcaattaaatgatcagctaatatcaagaaaa
ggtttgagtcgatctttattttctgcaactaaaaaatggtttagtggcagtaaagttcca
gaaaagagcattaatgagctaaaaaatacatctggattgctgtatccaccagaagctcca
gagcttcaaatcaggaaaatggctgacttatgttttttggtgcagcattatgatttggct
tacagttgctatcatactgcaaagaaagattttcttaatgatcaagcaatgctttatgca
gctggtgccttggaaatggcagcagtgtcagcgttccttcagccaggagcacccaggcca
taccctgcacattatatggatacagcaatccagacatacagggatatctgcaagaatatg
gtattggctgaaagatgtgtattgcttagtgctgaaatcttaaaaagccaaagcaaatat
tcagaggctgcagctctcctaatacggttgaccagtgaggattctgatcttcgaagtgca
cttcttttggaacaggcggcacattgctttataaacatgaagagtcccatggttagaaaa
tacgcgtttcatatgatactggcaggccaccggtttagtaaagcagggcagaagaaacat
gctttacgctgctattgtcaagccatgcaagtttacaaaggaaaaggctggtctcttgca
gaggatcacattaacttcaccattggacgtcagtcctatactcttaggcaactggacaat
gctgtgtctgcttttaggcatattttaatcaatgaaagtaaacaatctgctgctcaacaa
ggggccttcctcagagaatatctttatgtttacaagaatgtaagtcagctatcaccagat
ggtcctttaccgcagcttcctttaccatatattaacagttcagcaacacgggttttcttt
ggccatgacagacgaccagcagatggtgaaaagcaagcagctactcatgtaagtcttgat
caagaatatgactctgaatcctctcagcagtggcgagaacttgaggaacacgttgtggct
gtggtcaacagaggagtacttccatccaacttccaccccacagagtactgtttgaacagt
tactcagataattcaagatttccgctcacagttgtagaagagccaataacagtggaagtg
gcttttagaaaccctttgaaagttccacttttgttgactgatttgtcattgctctggaag
tttcaacctaaagatgtcagtggaaaggaaaatgaagttaaagaactagtaaaaggtgaa
cctgaaatgattggaactgaagttgtttcagaattcttaattaatagtgaagaatctaaa
gtggcaaggctaaagctctttccccatcacataggggagctgcatattctgggagttgtt
tataatcttggcactattcagggctccatgacagtagatggcattggtgctcttcctgga
tgtcacacaggaaagcattccttgagtatgtcagtccgagggagacaggatttagaaatt
caaggtcctcgacttaacaacacaaaagaagagaaaacatctattaaatatggtcctgat
cgacgtctagatcccataatcactgaggaaatgccactgttggaggtgttctttatacat
tttcctacagggcttctctgtggagaaatccgaaaagcatatgtagaatttgtcaatgtc
agcaaatgtcctcttactggattgaaggttgtttctaaacgtccagagttctttactttt
ggtggtaacacagctgttctaacaccactaagtccctcagcttctgagaactgtagtgct
tacaagactgttgtgacagattctacctctgtgtgtacagcactcatatcatcagcttct
tctgtagactttggcattggcataggaagtcagccagaggtgattcctgttccccttcct
gacactgttcttctacctggagcttcagttcagctaccaatgtggttacgtgggccagat
gaagaaggtgtccatgaaattaactttttgttttactatgaaagtgttaaaaagcagcct
aaaatacgtcacagaatattaagacacacggcagtcatttgtaccagtcgatctttgaat
gtgcgagccactgtctgcagaagtaattctcttgaagatgaggagggcagaggaggcaat
atgctagtctttgtggatgtggaaaataccaataccagtgaagcaggtgttaaggaattc
catatagtacaagtatcaagtagtagcaaacactggaagttacagaaatctgtaaatctc
tctgaaaacaaagatgccaaacttgcgaatagggagaagggaaaattttgcttcaaggca
atacgatgtaaggaggaagaagttgctacacagtcctcagaaaaatatacctttgcagat
atcatctttggaaatgaacagatagtaagttcagcaagcccctgtgcagacttcttttat
cgaagtttatcctctgaattgaagaaaccacaagcccagtcttctctgcatacagaaaag
cagtcaatagaggacactatgagattaattcagaagtgcaatgaggtggatttgaatatt
gttgtattgtggaaggcatacgtagtggaagacagtaagcagcttattttggaaggtcag
caccatgttgttcttcgcactataggaaaagaagctttttcatatcctcagaaacaggag
ccaccagaaatggaactattaaaatttttcagaccagaaaacactacagtttcctcaaga
ccatcagtagagcagctttctaatctgattagaacgagtcttcactatccagaatcattt
agtcatccttttcatcaaaaaagcctttgtttagtaccagtgactcttttactttccaat
tgttcaaaggccgacgtcgatgtaatagttgatcttaggcataaaacaacaagcccagaa
gcattggaaatccatggatcatttacatggcttggacaaacacaatataaacttcatctt
aaaagccaggagcttcacagtttgcagctgaaagcatgctttgtccatacaggtgtttat
aaccttggaactcctagggtatttgccaagttatcggaccaagttacagtgtttgaaaca
agtcagcagagctccatgcctgccctgatcatcatcaataatgtgtga
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