Globicephala melas (long-finned pilot whale): 115863809
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Entry
115863809 CDS
T11080
Symbol
RORB
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
115863809 (RORB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115863809 (RORB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gmf03310
]
115863809 (RORB)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115863809 (RORB)
Nuclear receptors [BR:
gmf03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
115863809 (RORB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DUF7217
Motif
Other DBs
NCBI-GeneID:
115863809
NCBI-ProteinID:
XP_030732857
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All DBs
Position
6:complement(45352835..45548753)
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AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYSSSISNGLSNLSNEASGTYANGHVMDLPKSEGYYNVDSGQPSPDQSGLDVTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
IHTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgataaatcctctgggatc
cactacggagtcatcacgtgtgaaggctgcaagggattctttagaaggagccagcagaac
aatgcctcttactcctgcccgaggcagagaaactgtttaattgacagaaccaacagaaac
cgttgccaacactgccgactgcagaagtgtcttgccctaggaatgtcgagagatgctgtg
aagtttgggaggatgtccaagaagcagagggacagcctgtatgctgaggtgcagaagcac
cagcagcggctgcaggagcagcggcagcagcagagtggggaggcggaagcccttgccagg
gtgtacagcagcagcatcagcaatggcctcagcaacctgagcaacgaggccagtggcact
tacgccaacggacacgtcatggacctgcccaagtccgagggttattacaacgtggattcc
ggccagccgtcccctgatcagtcaggacttgacgtgactggaatcaaacagataaagcaa
gaacctatctatgacctcacatccgtacccaacttgtttacctatagttctttcaacaac
gggcagttagcaccagggataaccatgactgaaatcgatcgaattgcgcagaacatcatt
aagtcccatctggagacatgtcagtacaccatggaggagctacaccagctggcatggcag
atccacacatatgaagaaattaaagcgtatcaaagcaagtccagggaagcactgtggcag
caatgtgccatccagatcactcacgccatccagtatgtggtagagtttgcaaagcggata
acaggcttcatggaactctgtcaaaatgatcaaatcctacttctgaagtcaggttgcttg
gaagtggttttagtgagaatgtgccgtgccttcaacccattaaacaacactgttctgttt
gaaggaaaatatggaggaatgcaaatgttcaaggccttaggttctgatgacctagtgaat
gaagcatttgactttgcaaagaatttgtgttccttgcagctgactgaagaagagattgct
ttgttctcatctgctgttctgatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaggaaaaaatttattttgcacttcaacatgtgattcagaagaatcac
ctggatgatgagaccttggcaaagttaatagccaagataccaaccatcacggcagtttgc
aacttgcacggggagaaactgcaggtatttaagcaatcgcatccagacatagtgaataca
ctctttcctccgttatacaaggagctctttaatcctgactgtgccaccgtctgcaagtga
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