Globicephala melas (long-finned pilot whale): 115863853
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Entry
115863853 CDS
T11080
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X2
KO
K20053
very low-density lipoprotein receptor
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf05017
Spinocerebellar ataxia
gmf05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
115863853 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
115863853 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115863853 (VLDLR)
Membrane trafficking [BR:
gmf04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
115863853 (VLDLR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115863853
NCBI-ProteinID:
XP_030732936
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Position
6:53456182..53488333
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AA seq
845 aa
AA seq
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MGTSARWALWLLLALCWAPRESGTTGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCAESDFVCNNGQCVPSRWQCDGDPDCEDGSDESPEQCHMRTCRISEISC
GARSTQCIPVSWRCDGENDCDSGEDEENCGNVTCSPDEFTCSSGRCISRNFVCNGQDDCS
DGSDELDCTPPTCGAHEFQCSTSSCIPISWVCDDDADCSDQSDESLEQCGRQPVIHTKCP
ASEIQCGSGECIHKKWRCDGDPDCKDGSDEVNCPSRTCQPDQFECEDGSCIHGSRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISKVCNQEQDCRDWSDEPLKECHVNEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGTKRKFLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRALVTADIQ
WPNGITLDLIKGRLYWLDSKLHMLSSVDLNGQDRRVVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHALVQPSGKNWCKEDMENGGCEYLCL
PAPQINDHSPKYTCSCPNGYRLEDNGRECQKINVTTAVSEVSVPPKGTSAAWAILPLLLL
AMAAVGGYLMWRNWQHKNMKSMNFDNPVYLKTTEEDLSIDIGRHSASVGHTYPAISVVST
DDDLA
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgtgctgggcgccccgg
gagagcggcaccaccggagcgggaagaaaagccaaatgtgaaccctcccaattccagtgc
acaaatggccgctgtattacgctgctgtggaaatgcgatggggacgaagactgtgctgat
ggcagtgacgaaaagaactgtgtgaagaagacgtgtgccgagtctgactttgtgtgcaac
aacggccagtgtgttcccagccgatggcagtgtgacggggaccccgactgcgaagatggt
tctgatgaaagcccagagcagtgccatatgagaacatgccgcataagtgaaatcagctgt
ggtgcccgttccactcagtgtatcccagtgtcctggagatgtgatggtgaaaatgattgt
gacagtggagaagatgaagaaaactgtggcaacgtgacgtgcagccctgatgagttcact
tgctccagtggccgctgcatctccaggaatttcgtgtgcaatggccaggatgactgcagc
gacggcagcgacgagcttgactgcaccccacccacctgcggggcccacgagttccagtgc
agcacctcctcctgcatccccatcagctgggtgtgcgatgacgacgcagactgctcggac
cagtcggatgagtccctcgagcagtgcggccgccagccagtgatccacaccaagtgccca
gccagcgagatccagtgcggctctggcgagtgcatccacaagaagtggcgatgtgatggg
gatcctgattgcaaggatggcagcgatgaggtcaactgtccttcccgaacctgccaacct
gaccagtttgagtgcgaggatggtagctgcatccacggcagcaggcagtgcaacggcatc
cgagactgtgtcgacggttctgatgaagtcaactgcaaaaatgtcaatcagtgcttgggc
cccgggaaattcaagtgcagaagcggggaatgcatagatatcagtaaagtgtgtaaccag
gagcaggactgcagggactggagtgatgagcccctgaaagaatgtcatgtaaatgaatgc
ttggttaataatggcggatgctcccatatctgcaaagacctagtgataggctacgaatgt
gactgtgcagctgggtttgaactgatagataggaaaacctgtggagatattgacgaatgc
caaaatccgggaatctgcagtcaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaggcagtaggcaaagag
ccaagtctgatcttcactaatagacgagacatcaggaagattggcttggagaggaaagaa
tatatccaactagttgaacagctaagaaacactgtggctctcgatgctgacattgctgct
cagaaactattctgggctgatctaagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgatgcggcttctaagactatttcagtagct
accctagatggaaccaagaggaagttcctgtttaactctgacttgcgagagcctgcctcc
atagctgtggacccgttgtctggctttgtgtactggtcagactggggtgaaccagctaaa
atcgaaaaagccggaatgaatggatttgacagacgggcgctggtgacagcggacattcag
tggcctaacggaattacgcttgacctcataaagggccgcctctattggctggattccaaa
ttgcacatgttatccagtgtggacttgaacggccaagatcgcagggtggtcctaaagtct
ctggaattcctagctcatcccctcgcgctcacaatatttgaggatcgtgtctactggata
gatggggaaaatgaagccgtctacggcgccaataaattcactggatcggagctggccact
ctagtcaacaaccttaacgatgcccaagacatcatcgtctatcatgcacttgtacagcca
tcaggtaaaaactggtgcaaagaagacatggagaatggaggatgtgaatacctctgcctg
ccagccccacagattaatgaccactctccaaaatatacctgttcctgtcccaatggctac
cgtctagaggacaatggccgagaatgccaaaagatcaatgtgaccacagcagtatcggag
gtcagtgttcccccaaaagggacttctgctgcctgggccatccttcccctcttgctctta
gcaatggcagcagtaggtggctacttgatgtggcggaactggcaacacaagaacatgaaa
agcatgaactttgacaatcctgtgtacttgaagaccactgaagaggacctgtcaatagac
attggtagacacagtgcttctgtcggacacacgtacccagcaatatccgttgtaagcaca
gatgacgatctagcttga
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