Globicephala melas (long-finned pilot whale): 115864008
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Entry
115864008 CDS
T11080
Symbol
OTX1
Name
(RefSeq) homeobox protein OTX1
KO
K09326
homeobox protein OTX1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
115864008 (OTX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115864008 (OTX1)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
115864008 (OTX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
115864008
NCBI-ProteinID:
XP_030733218
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All DBs
Position
12:complement(36986719..36994755)
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AA seq
355 aa
AA seq
DB search
MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSGTKSRPAKKKSSPVRESSG
SESSGQFTPPAVSSSASSSSSASSASANPAAAAAAGLGGNPAVAVPSSLSTPAASSIWSP
ASISPGSAPASVSVPEPLAAPSNASCMQRSVAAGAASAAASYPMSYGQGGSYGQGYPAPS
SSYFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMASHHHHHPHAHHPLSQSSGHHHHHHHH
HHQGYGGSGLAFNSADCLDYKEPGAAAASSAWKLNFNSPDCLDYKDQASWRFQVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacaacccccatacggcatgaacgggctgggcctagccgggccg
gctatggacctcctacacccctccgtgggctatccggccaccccgcggaagcagcgacgg
gagcgcaccacctttacgcgctctcagctggacgtgctcgaggcactcttcgccaagact
cgctaccctgacatcttcatgcgcgaggaggtggcgctgaagatcaacctgccagagtcc
agagtccaggtctggttcaagaatcgccgtgccaaatgccgccagcagcagcagagcggg
agcgggaccaagagccgcccagccaagaagaagtcctccccggtgcgggagagctcgggc
tccgaaagcagcggccagttcacgccgcctgctgtgtccagttccgcctcgtcctccagc
tccgcatcgagcgcttcggccaacccggcggctgcagcggctgcaggcctgggcgggaac
ccggcggtggcagtcccgtcgtcgttgagtacgccggctgcctcgtccatctggagtccg
gcttccatctcgcccggctcagcgcccgcttccgtgtcggtgcccgagcctttggccgcg
cctagcaacgcatcgtgtatgcagcgctcggtagccgcaggcgccgcctctgccgcagcc
tcctatcccatgtcctacggccagggcggcagctatggccagggctaccccgcgccctcc
tcttcctactttggcggcgtggactgcagctcatatctagcgcccatgcactcgcaccac
cacccgcaccagctcagccctatggcaccctcctccatggctagccaccatcaccaccat
ccccacgcgcaccacccgttgagccagtcctcaggccaccaccaccaccatcaccaccac
catcaccagggctatggcggctcggggctcgccttcaactctgccgactgcttggattac
aaggagcctggcgccgccgccgcttcctctgcttggaaactcaacttcaactcgcctgac
tgtctggactataaggaccaagcctcatggaggtttcaggtcttgtga
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