KEGG   Globicephala melas (long-finned pilot whale): 115864127
Entry
115864127         CDS       T11080                                 
Symbol
DCTN1
Name
(RefSeq) dynactin subunit 1 isoform X8
  KO
K04648  dynactin 1
Organism
gmf  Globicephala melas (long-finned pilot whale)
Pathway
gmf04814  Motor proteins
gmf04962  Vasopressin-regulated water reabsorption
gmf05014  Amyotrophic lateral sclerosis
gmf05016  Huntington disease
gmf05022  Pathways of neurodegeneration - multiple diseases
gmf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    115864127 (DCTN1)
 09150 Organismal Systems
  09155 Excretory system
   04962 Vasopressin-regulated water reabsorption
    115864127 (DCTN1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    115864127 (DCTN1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    115864127 (DCTN1)
   05016 Huntington disease
    115864127 (DCTN1)
   05022 Pathways of neurodegeneration - multiple diseases
    115864127 (DCTN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmf04131]
    115864127 (DCTN1)
   03036 Chromosome and associated proteins [BR:gmf03036]
    115864127 (DCTN1)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gmf04812]
    115864127 (DCTN1)
Membrane trafficking [BR:gmf04131]
 Endosome - Golgi transport
  Rab GTPases and associated proteins
   Rab associated proteins
    115864127 (DCTN1)
Chromosome and associated proteins [BR:gmf03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Dynactin complex
     115864127 (DCTN1)
Cytoskeleton proteins [BR:gmf04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dynactins
     115864127 (DCTN1)
SSDB
Motif
Pfam: Dynactin CAP_GLY TMF_DNA_bd
Other DBs
NCBI-GeneID: 115864127
NCBI-ProteinID: XP_030733484
LinkDB
Position
12:26175757..26206030
AA seq 1261 aa
MAQSKRHVYSRTPSGSRMSAEASARPLRVGSRVEVIGKGYRGTVAYVGATLFATGKWVGV
ILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKVLRRE
GTDSNAKTSKLPTRPASTGVAGASSSLGPSGSASAGELSSSEPSTPAQTPLAAPIIPTPA
LTSPGAAPPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAEDKAKLKELEKHKIQLEQVQE
WKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADTADAIEMATLDKEMAEERAES
LQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNARLKDALVRMRDL
SSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAESTIDELKEQVDAALGAEEMV
EMLTDRNLNLEEKVRELRETVGDLEAMNEMNDELQENARETELELREQLDMAGARVREAQ
KRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEASVERQQQPPPETFDFKIKFA
ETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPGGDHDCVLVLLLMPRLICKAE
LIRKQAQEKFELSENCSERPGLRGAVGEQLSFAAGLVYSLSLLQATLHRYEHALSQCSVD
MYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPLTKAIKYYQHLYSIHLSEQPE
DSTIQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEASDIALLLRDLETSCSDIRQFCKK
IRRRMPGTDAPGIPAALAFGPQVSDTLLDCRKHLTWVVAVLQEVAAAAAQLIAPLAENEG
LPVAALEELAFKAGEQIYGAPSGSPYECLRQSCSILISTMNKLATAMQEGEYDAERPPSK
PPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSEANVRLSLLEKKL
DSAAKDADERIEKVQTRLEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRLNSQ
SKRTIEGLRGPPPSGIATLVSGIAGEEQQRGGASGQAPGSVPGPGLVKDSPLLLQQISAM
RLHISQLQHENSILKGAQMKASLAALPPLHVAKLSLLPREGPGSDLAAGVLYRKTNQLLE
TLNQLSAHTHVVDITRTSPAAKSPSAQLLEQVAQLKSLSDTIEKLKDEVLKETVSQRPGA
TVPTDFATFPSSAFLRAKEEQQDDTVYMGKVTFSCAAGLGQRHRLVLTQEQLHQLHGRLI
S
NT seq 3786 nt   +upstreamnt  +downstreamnt
atggcccagagcaagaggcacgtgtacagtcggactcccagcggcagcagaatgagtgcg
gaggcaagtgcccggcctctgcgagtgggctcccgcgtggaggtgattggaaaaggctac
cgtggcactgtggcctatgttggagccacactatttgccactggcaaatgggtaggtgtg
atcctggatgaagcaaaaggcaagaatgatggaactgtccaaggcaggaagtacttcact
tgtgacgaagggcatggcatctttgtgcgccaatcccagatccaggtatttgaagatgga
gcagatactacttccccagagacacctgattcttctgcctcaaaggtcctcagaagagag
ggaactgactcaaatgcaaagaccagcaaactgcccacccgcccagccagcactggggta
gctggggccagtagttccctgggcccctctggctcagcatcagcaggtgagctgagcagc
agtgagcccagcaccccagctcagactccgctggcggcacccatcatccccacgccagcc
ctcacctctcctggagcagccccaccgcttccttccccgtctaaggaggaggaggggctg
agggcccaagtgcgggacctggaggagaaactggagaccctgcgactgaaacgtgcagaa
gacaaggcaaagctaaaagagctggagaaacacaagatacagctggagcaggtgcaggaa
tggaaaagcaaaatgcaggagcagcaggcagacctgcagcggcgcctcaaggaggctcgg
aaggaagccaaggaggccctagaggcaaaggaacgctacatggaggagatggctgacact
gctgatgccatcgagatggccactctggataaggagatggccgaagagcgggctgagtcc
ctacagcaagaggtggaggcgctgaaggagcgtgtggacgagctcaccactgacttggag
atcctcaaggctgagattgaagagaagggctcagatggcgctgcgtccagttatcagctc
aagcagcttgaggagcagaacgcccgcctaaaggatgccctagtgagaatgcgggatctt
tcttcctccgagaagcaggagcacgtgaaactccagaagctcatggaaaagaagaaccaa
gagctggaagttgtgaggcaacagcgggagcgtctgcaggaggagctgagccaggcagag
agcaccattgatgagctcaaggagcaggtggatgctgccctgggtgctgaggagatggtg
gagatgctgacagaccggaacctgaatctggaagagaaagtgcgggaattgagagaaacc
gtgggggacttggaagcaatgaatgaaatgaacgatgagctgcaggagaacgcacgtgag
acagaactggagctgcgggagcagctggatatggcgggtgcacgggtgcgagaggcccag
aagcgtgtggaggcggcccaggagacagttgcagactatcagcaaaccatcaagaagtat
cgccagctgaccgcccacctgcaggatgtgaaccgggaactgacaaaccagcaggaagca
tctgtggagaggcagcagcagccacccccagagacttttgacttcaaaatcaagtttgct
gagactaaggcccatgccaaggcaattgagatggagttgaggcagatggaggtggcacag
gccaaccggcacatgtccctgctgacagccttcatgcctgacagcttccttcggccaggt
ggggaccatgactgcgtcctggtgctgctgctcatgcctcgtctcatttgcaaggcagag
ctaatccggaagcaggcccaggagaaatttgaactaagtgagaactgttcagagcgtcca
ggacttcgaggagctgtgggggagcagctcagctttgctgctgggctggtgtattcgctg
agtttgctgcaggccacactccaccgttatgagcatgccctctctcagtgcagtgtggac
atgtataagaaggtgggcagcctctaccctgagatgagtgcccacgaacgctccttggat
tttctcattgagctgctgcacaaggaccagctggacgagactgtcaacgtagagcctctc
accaaagccatcaagtactaccagcatctgtacagcatccacctctctgaacaaccagag
gacagtaccatacagctggctgaccacattaagttcacccagagtgccctggactgcatg
agtgtggaggtgggacggctgcgggccttcttgcagggtgggcaggaggcttcagatatt
gcactcctgctccgggacctggaaacttcgtgcagtgatatccgccagttctgcaagaag
atccggaggcgaatgccagggacagatgctcctgggatcccagctgcactggcctttgga
ccacaggtatccgacacactcctagactgcaggaaacacctgacgtgggtggtggctgtg
ctgcaggaggtggctgctgctgccgcccagctcattgccccgctggcagagaatgaaggc
ctgcctgtggctgccctggaggagctggctttcaaagcaggcgagcagatctacggagcc
ccctccggcagcccctatgagtgtctgcgccagtcatgcagcatcttgatcagtaccatg
aacaagttggccaccgccatgcaggagggagagtacgatgcagagcggccccctagcaag
cctcccccagttgagctgcgggctgcagcccttcgtgcagagatcacagatgctgaaggc
ctgggcttgaagcttgaagatcgagagacagttattaaggagttgaagaagtcactcaag
atcaagggggaagagctcagtgaggccaatgtgcggctgagcctcctggagaagaagctg
gacagtgcagccaaggatgcagatgagcgcatcgagaaagtccagactcggctggaggag
acccaggcgctgctgcggaagaaggagaaagagttcgaggagacgatggatgcacttcag
gctgacatcgaccagctggaggcagagaaagcagagttaaagcagcgattgaacagccag
tccaagcgcacaatcgaggggctccggggtccccctccctcgggtattgctaccctggtg
tctggcattgctggtgaagaacagcagcgaggaggtgcctctgggcaggctccgggatct
gtgccaggcccagggctggtgaaggactcaccactgctgcttcagcagatctctgccatg
aggctgcacatctcccagctccagcatgagaacagcatcctcaagggagcccagatgaag
gcatccttagcagccctgccccctttgcacgtggcaaagctctctctcctaccccgtgag
ggccctggcagtgatctagctgctggagtgctgtatcgtaagactaaccagctgctggag
acattgaatcagttgagcgcacacacccatgtcgtggacatcacccgcaccagccctgct
gccaagagcccatcggcccagctcctggagcaagtggctcagctcaagtccctaagcgac
accatcgagaagctcaaggatgaggtccttaaggagactgtatctcagcgccctggagcc
acggtccccactgactttgctaccttcccttcatcagccttcctcagggccaaggaagag
cagcaggacgacactgtatacatgggcaaagtgaccttctcgtgtgctgctggccttgga
cagcgacaccggctggtgctcacccaggagcagctgcaccagcttcatggtcgcctcatc
tcctaa

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