Globicephala melas (long-finned pilot whale): 115864259
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Entry
115864259 CDS
T11080
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04360
Axon guidance
gmf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
115864259 (ROBO1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
115864259 (ROBO1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gmf04515
]
115864259 (ROBO1)
Cell adhesion molecules [BR:
gmf04515
]
Immunoglobulin superfamily
ROBO family
115864259 (ROBO1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
VEGFR1-3_N_Ig-like
Pur_ac_phosph_N
Unc5_NetrinR_N
Ig_PDGFR_d4
DUF7908
HYDIN_VesB_CFA65-like_Ig
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
115864259
NCBI-ProteinID:
XP_060153899
LinkDB
All DBs
Position
4:complement(31835450..32946976)
Genome browser
AA seq
1677 aa
AA seq
DB search
MAVLLLMLLVLMAEITSPVGVSGRMKAGSRWRGEKNHPEDVERGKDNGTPIPTSDNDDNS
LGYTGSRLRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKD
DPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFR
QNPSDVMVAVGEPAVMECQPPRGHPEPTISWRKDGSPLDDKDERITIRGGKLMITYTRKS
DAGKYVCVGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTV
RWRKDDGELPKSRYEIRDDHTLKIRKVMAGDTGSYTCVAENMVGKAEASATLTVQEPPHF
VVKPRDQVVALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDL
TITNVQRSDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLV
LSCVATGSPVPTILWRKDGVLVSTQDSRIKQLETGVLQIRYAKLGDTGRYTCIASTPSGE
ATWSAYIEVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVSRNTVTLSWQPNLNSGATPTS
YIIEAFSHASGSSWQTVAENVKTETFAIKGLKPNAIYLFLVRAANAYGISDPSQISDPVK
TQDVPPTSQGVDHKQVQRELGDVVLHLHNPTVLSSSSVEVHWTVDQQSQYIQGYKILYRP
FGASHGESEWLVFEVRTPTKNSVVIPDLKKGVNYEIKARPFFNEFQGADSEIKFAKTLEE
APSAPPQSVTVSKHDGNGTAILVSWQPPPEDTQNGMVQEYKVWCLGNETRYHINKTVDGS
TFSVVIPSLVPGIRYSVEVAASTGAGAGVKSEPQFIQLDSHGNPVSPEDQVSLAQQISDV
VKQPAFIAGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGG
EAVSSGGRPGLLNISEPATQPWLADTWPNTGNNHNECSINCCTAGNGNSDSNLTTYSRPA
DCIANYNNQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVNPSGQPTPY
ATTQLIQSNLSNNMNNGSGDSSEKHWKPSGQQKQEVVPIQYNIMEQNKLNKDYRANDTIP
PTIPYNQSYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKVPKQGGMNWADLLPPPPVHP
PQSASEEYSISVDESYDQEMPCPVPPARMYLQQGELEEEEDERGPTPPVRGAASSPAAVS
YSHQSTATLTPSPQEELQPMLQDCPEEIGHMQHQPDRRVLPCVRAHLLAKMDSSEEACGR
QPVSPPPPPRPISPPHTYGYISGPLVSDMDTDVPEEEEDEADMEVAKMQTRRLLLRGLEQ
TPASSVGDLESSVTGSMINGWGSASEEDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEY
AGLKVARRQMQDAAGRRHFHASQCPRPTSPVSTDSNMSAAVVQKARPAKKQKHQPGHLRR
EAYTDDLPPPPVPPPAIKSPTAQSKAQLEVRPVMVPKLPSIETRTDRSSERKGGSYKGRE
VLDGRQVAEMRPNPGDPREAQEQQNDGKGRGNKAAKRDLPPAKTHLIQEDILPYCRPTFP
TSNNPRDPSSSSSMSSRGSGSRQREQANVGRRNIAEMQVLGGYEREDNNEELEETES
NT seq
5034 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgttactgatgctgctggtcttgatggcagaaataacttctcctgtgggt
gtctcaggcagaatgaaagctggatcaaggtggagaggggaaaagaatcaccctgaagac
gtagagaggggaaaggacaacgggacgccaatccccacctctgataacgatgacaattcg
ctgggctatacaggctcccgtcttcgtcaggaagattttccacctcgcattgttgaacac
ccttctgacctaattgtctcaaaaggagaacctgcaactttgaactgcaaagctgaaggc
cgccccacacccaccattgaatggtacaaaggtggggagagagtggagacagacaaagat
gaccctcgctcacaccgaatgttgctgccaagtggatctttatttttcttacgtatagtg
catggacgaaaaagtaggcctgatgaaggggtctatgtctgtgtagcaaggaattacctc
ggagaggctgtgagtcacaatgcatcgctggaggtagccatactacgggatgacttcaga
caaaacccttccgatgtcatggtggctgtgggagagcctgcagtgatggaatgccagcct
ccacgaggccatccggagcccaccatttcgtggagaaaagatggctctccgctggatgat
aaagatgaaagaataactatacgaggaggaaagctcatgattacttacacccgcaaaagt
gatgctggcaaatacgtttgtgttggtaccaacatggttggggaacgtgagagtgaagta
gcagagctaactgttttagagagaccttcatttgtgaagagacctagtaacttggcagtc
actgtggatgacagtgcagaatttaaatgtgaggcccgaggcgaccctgtgcccacagta
cgatggaggaaagatgatggggaactgcccaaatccagatatgaaatcagagatgatcat
accttgaaaattcggaaggtgatggctggtgacacggggtcatatacttgtgttgcggaa
aatatggttggaaaagctgaagcctctgctactctgactgtccaagaacctccacatttt
gttgtgaaaccccgtgaccaggttgttgcattgggacgaactgtaactttccagtgtgaa
gcaactggaaatcctcaaccagctatcttctggaggagagaggggagtcagaatctgctt
ttctcatatcaaccaccacagtcatccagccgtttttcagtctcccagactggtgacctc
actattactaatgtccagcgatctgatgttggttattatatctgccagactttaaatgtt
gccggaagtatcatcacaaaagcatatttggaagttaccgatgtgatcgcagaccgacct
cccccagtcattcgacagggtcctgtgaatcagactgtagcagtggatggtactttagtg
ctcagctgtgtggccacaggcagtccagtgcccacaattctgtggagaaaggatggagtc
cttgtttcaacccaagattctcgaatcaaacagctggagaccggagtactacagatccga
tatgctaagctgggtgacactggtcggtacacctgcattgcatcaacccccagcggtgaa
gcaacatggagtgcttacattgaagtccaagaatttggagttccagttcagcctccaaga
cccaccgacccaaatttaatccctagtgccccctcaaaacctgaagttacagatgtcagc
cgaaatacagtaacgttgtcatggcaaccaaatttgaattcaggtgctactccaacatct
tatattatagaagccttcagccatgcatctggcagcagctggcagaccgtagcagagaat
gtgaaaacagaaacatttgccattaaaggactcaaacctaatgcaatttaccttttcctt
gtgagggcagcaaatgcatatggaattagtgatccaagccagatatcagacccagtgaaa
acacaagatgttcccccaacaagtcagggggtggatcacaagcaggtccagcgagaactg
ggagatgtcgtactgcatctccacaaccccaccgtcctttcttcctcttcggtcgaagtg
cactggacagtggaccaacagtctcagtatattcaaggatacaaaattctttatcgcccg
tttggagccagccatggtgaatcggagtggttagtttttgaagtgaggactccaaccaaa
aatagcgtggttatccctgatctcaaaaaaggagtcaactatgaaattaaggctcgtcct
ttttttaatgaatttcaaggagcagatagtgaaattaaatttgccaaaaccctagaagaa
gcacccagtgccccaccccaaagtgtaactgtatcaaagcatgatggaaatggaactgca
attcttgtcagttggcagccacctcctgaagatactcagaatggaatggtccaagagtat
aaggtttggtgtctgggcaatgaaactcgataccatataaacaagacagtagatggttcc
accttttctgtggttattccctcactggttcctgggatccggtatagcgtagaggtggca
gccagcactggggcgggagccggggtgaagagtgagccacagttcatccagttagattct
catggaaaccccgtgtcacctgaggaccaagtcagccttgctcagcagatctcagacgtt
gtgaagcagccagcgttcatcgcaggaattggggcagcctgctggatcatccttatggtt
tttagcatctggctctaccgacaccggaagaagagaaatgggctgactagtacttatgcg
ggtatcagaaaagtcccgtcttttaccttcacaccaacagtaacttatcagagaggaggc
gaagctgtgagcagtggagggaggccaggacttctcaacatcagtgaacctgccacgcag
ccatggctggcagacacgtggcctaatactgggaacaatcacaatgagtgctccatcaac
tgttgcacagcaggcaatggaaacagcgacagtaacctgaccacgtatagtcgcccagct
gattgtatagcaaattataacaaccaactggataacaaacaaacaaatctgatgctccct
gagtcaactgtttatggtgatgtggaccttagtaacaaaatcaatgagatgaaaaccttc
aatagcccaaatctgaaggatgggcgttttgtcaatccatcagggcagcccaccccttat
gccaccacccagctcatccagtcaaacctcagcaacaacatgaacaatggcagtggggac
tccagcgagaagcactggaaaccgtccggacagcagaaacaagaagtggtaccaattcag
tataacatcatggagcaaaacaaactgaacaaagattatcgagcaaatgacacaattcct
ccaactatcccgtataatcaatcatatgaccagaatacaggaggatcctacaatagttca
gaccggggcagtagtacatctgggagtcaagggcacaagaaaggggcacggacacccaag
gtaccaaaacaaggtggcatgaactgggcagacctgcttcctcctcccccggtgcatcca
cctcagagcgctagtgaagagtacagtatttctgtagatgaaagctatgaccaagaaatg
ccatgtcctgtgccaccagccaggatgtatttgcaacaaggtgaactagaagaggaggaa
gatgaacgaggccccactcctcctgtgcggggagctgcttcttctccagctgccgtgtct
tacagccatcagtccactgccactctgaccccctctccacaggaagaactccagcccatg
ttacaggattgtccagaggagatcggccacatgcagcaccaacccgacaggagggtcctc
ccatgtgtgcgtgcacatctcttagccaagatggattccagcgaagaggcctgtggacgg
cagccggtgagccctcctccacctccacggccgatttccccaccccatacttacggctac
atttcaggaccccttgtctcagatatggatacggatgtgccagaagaggaagaagacgaa
gccgacatggaagtagccaagatgcagaccagaaggcttttgttacgcgggcttgagcag
acccctgcctccagtgttggggacctggagagctctgtcactgggtccatgatcaatggc
tggggctcagcctcagaggaggacaacatttccagcggacgctccagtgttagttcttct
gacggctcctttttcaccgatgccgattttgcccaggcagtggcagcagcagcagagtac
gctggtctgaaagtggcacggcgccaaatgcaggatgctgctggccgccgacattttcat
gcatcccagtgtcctagacccacaagtcctgtttccacagacagcaacatgagtgctgcg
gtagtacagaaggctagaccagccaagaaacaaaaacaccagccaggacatctgcgcaga
gaagcctacacagatgatcttccacctcctcctgtgccacctcctgctataaagtcaccc
actgcccaatccaaggcacagctggaggtacgacctgtaatggtgccaaaactcccttcc
atagaaacgagaacagacagatcatcagagagaaaaggaggcagttacaaggggagagaa
gtattggatggaagacaagttgctgaaatgcgaccaaatccaggtgaccccagagaagca
caggaacagcaaaatgatgggaaaggacgaggaaacaaggcagcaaaacgagaccttcca
ccagcaaagactcatctcatccaagaggatattctaccttactgtagacctacttttccg
acatcaaataatcccagagatcctagttcttcaagctcaatgtcatcaagaggatcagga
agcagacaaagagaacaagcaaatgtaggtcgaagaaatattgcagaaatgcaagttctt
ggaggatatgaaagagaagataataatgaagaattagaggaaactgaaagctga
DBGET
integrated database retrieval system
