Globicephala melas (long-finned pilot whale): 115864335
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Entry
115864335 CDS
T11080
Symbol
PRDM2
Name
(RefSeq) PR domain zinc finger protein 2 isoform X4
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf00310
Lysine degradation
gmf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115864335 (PRDM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmf03000
]
115864335 (PRDM2)
03036 Chromosome and associated proteins [BR:
gmf03036
]
115864335 (PRDM2)
Enzymes [BR:
gmf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
115864335 (PRDM2)
Transcription factors [BR:
gmf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
115864335 (PRDM2)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
115864335 (PRDM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-C2H2_6
SET
zf-C2HE
zf-H2C2_2
zf-C2H2_ZNF462_1st
zf-C2H2_11
PyrI_C
Motif
Other DBs
NCBI-GeneID:
115864335
NCBI-ProteinID:
XP_030733782
LinkDB
All DBs
Position
1:complement(177631841..177749402)
Genome browser
AA seq
1629 aa
AA seq
DB search
MWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINRAIYYKTLKPIAPGE
ELLVWYNGEDNPEIAAAIEEERASARSKRSSPKSRKGKKKSQENKNKANKTEDIQLKTSE
PDSTSANMRDSVEGPRDEDEKPSASAAEQTAALQEVVSQDVPLEPALPPPAQDPQVGPAA
ELDAARSDANDAEEEEEEEGEEGELDEEEAAAAGVPGGSAAGELEMRCDESPEDLLEEPR
TVPLGALEDSPEVAPAVRIPKAKEEANGDVFETFLFPCQHCERKFTTKQGLERHMHIHIS
TVNHAFKCKYCGKAFGTQINRRRHERRHEAGLKRKPSLTLRPPEAPADGRAPGDGAPPKD
DAQPPSLAQDSLTLNSEKASQDTVNSSVVEENGEVKELHPCQYCKKVFGTHTNMRRHQRR
VHERHLIPKGVRRKGGLLEEQQPPAEQAPPAQSVYVPSTEPEEEGEADDVYIMDISSNIS
ENLNYYIDGKIQTSCSTSNCDVIEMESSSADLYGINCLLTPVTVEITQNIKTTQVPITDD
LPKEPSSSTNSESKKRRTASPPVLPRIKAETESDAVAPSCSLSLPLSISTTEAVPFHKEK
NVYLSSKLKQLLQTQEKLTPPAGISATEIPKLGPVCVSTPASMLPVTSSRFKRRTSSPPS
SPQHSPALRDFGKPGDGKAMWTEAVLSSKKPKLESHSNSPAWSLSGRDERETGSPPGFDE
YKVSKEWAASSTFSNVCNQQPLDLSSGVKQKAEGTGKAPVQWESVLDLSVHRKPSSDSEG
KEFKENHSVQPACSAAKKKKPTTCMLQKVLLNEYNGVDLPVENAPDVTRSPSPCKPLDPQ
PDPDLGPDSSLPAPPGESPPSSPALQTSSLSSGQLPPLLTPTNPSSPQPCPPVLTVATPP
PPLLPTVPLAAPSSGASPHPCPSPLSNATAQSPLPILSPTVSPSPSPIPSVEPLTSAASP
GPPTLSSSSSSSASPSFSSSSSSSSPSPPPLSAVSSVVSSGDNLEASLPMISFKQEELEN
EGPKAREESQSATARDIVQETFNKNFVCNVCESPFLSIKDLTKHLSIHAEEWPFKCEFCV
QLFKAKTDLSEHRFLLHGVGNIFVCSVCKKEFAFLCNLQQHQRDLHPDTVCTHREFESGT
LRPQNFTDPSKAHAEHMQSLPEDPLETSKEEEELNDSSEELYTTIKIMASGIKTKDPDVR
LGLNQHYPSFKPPPFQYHHRNPLGIGVTATNFTTHNIPQTFTTAIRCTKCGKGVDNMPEL
HKHILACASASDKKRYTPKKNPVPLKQTVQPKNGVVVLDSSGKNAFRRMGQPKRLNFSVE
LSKMSSNKLKLNALKKKNQLVQKAILQKNKSAKQKADLKNAPESSSHICPYCNREFTYIG
SLNKHAAFSCPKKPLSPSKRKASHSSKKGGHPSPASSDRNNGSSHRRRTADAEIKMQSMQ
APLGKTRARSSGPAQVPPPSSSFRSKQNVKFAASVKSKKPSSSLRNLSPIRMAKMTHSDS
KKPKAAARNHAAQLSGKTSRSLHVRAQKSRAVLQSKSALASKKRTDRFSVKSRERSGGPI
TRSLQLAAAADPSENRREDGSGKQELKDFSYSLRLASRCPPPAAPYITRQCRNVKATAAA
QFQGSLFKE
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgtgggaggtctattacccaaatttggggtggatgtgcattgatgccaccgatccagag
aaggggaactggctgcgctatgtgaattgggcttgctcgggagaagagcaaaatttattt
ccactggaaatcaacagggccatttactataaaactttaaagccaatcgcgccgggcgag
gagctcctggtctggtacaatggggaagacaaccccgagatagcagctgcgattgaggaa
gagcgagccagcgcccggagcaagcggagctccccgaaaagcaggaaagggaagaagaaa
tcccaagaaaataaaaacaaagcaaacaaaactgaagacatacagctgaagacaagtgag
ccagattccacctctgcaaatatgagagattctgtggaaggccccagagacgaagacgag
aagccttccgcgtccgccgccgagcagacggctgcccttcaggaggtggtgagtcaggat
gtgcctctggagcccgccctcccgccccctgcccaggacccccaggtgggaccggctgca
gagctggacgcggcgcgtagcgatgcgaacgacgcggaggaggaagaggaggaggagggg
gaggagggggagctggacgaggaggaggcggcggcagctggcgtgccaggcgggagcgcc
gcgggagagctggagatgcggtgtgacgagagcccagaggatctgttagaagagccacgg
actgttccgctgggcgctcttgaagactctccggaggtagcacctgccgtcagaattccc
aaagctaaagaagaggccaatggtgacgtgtttgaaacgtttctgttcccgtgtcagcac
tgcgagaggaagttcacgaccaaacaggggctggagcggcacatgcacatccacatatcc
acggtaaaccacgccttcaagtgcaagtactgcgggaaggcgttcggcacgcagatcaac
aggcggcggcacgagcggcgccacgaggcggggctgaagcggaagcccagcctgacgctc
cggccaccggaggccccagccgatggcagggcgcccggggacggcgctcctccgaaggat
gacgcgcagcctcccagtcttgcgcaagactctctgaccttgaattcagagaaggcttcc
caagacacggtaaattcttctgttgtagaagagaacggagaagttaaggagcttcatccg
tgccaatactgtaaaaaggtttttggaactcacaccaacatgaggcggcatcagcgcagg
gtccacgagcgtcacctgattcctaaaggtgtgcggcgaaaagggggtctcctcgaagag
cagcagcccccggcagagcaggccccgcctgcccagagtgtctacgtacccagcacagag
ccagaggaggaaggggaggcagacgacgtgtacatcatggatatttctagcaatatctcg
gaaaatttaaattactacattgatggtaaaattcagaccagctgcagcaccagtaactgt
gatgttattgagatggaatccagttcggcagacttgtatggtatcaactgtctgctcact
ccggttacagtggaaataactcaaaatataaagaccacacaggtccctataacagatgat
cttccgaaagagccttccagcagcacgaacagtgagtccaagaaacggaggactgccagt
cctcctgtgttgcccagaattaaagccgagaccgagtctgatgccgtagcaccttcgtgt
tccttgagcctgcctctcagcatatcaaccacagaggccgttccgttccacaaagagaaa
aatgtgtatttgtcatcgaagctcaaacaactgcttcaaacgcaggagaaactgactcct
cctgcagggatttcagccactgaaatacctaaattaggtcctgtctgtgtgtccacgcct
gcgtcgatgctccctgtgacctcgagcaggtttaagaggcggaccagctctccccccagc
tctccacagcacagtcctgcccttcgagactttgggaagccgggcgatgggaaagccatg
tggactgaggcagttctgagttccaaaaagcccaaattagaaagtcatagcaactcacca
gcatggagtttgtctgggagagatgagagagaaactgggagccctccaggctttgatgaa
tataaagtatctaaagagtgggcagctagttctacttttagcaacgtatgcaaccagcag
ccactggatttatccagtggtgtaaaacagaaggctgagggtacaggcaaggctccggtc
cagtgggaatctgtgttagatctcagtgtgcatagaaagcctagtagtgactctgaaggc
aaggaattcaaagaaaaccattcggtgcagccagcctgcagcgctgcaaagaaaaagaag
ccaaccacctgcatgctacagaaggtccttctcaacgaatacaatggcgtcgacttacct
gtagaaaatgctccagacgtgaccaggagccccagtccttgtaaacccctagatcctcag
ccggaccctgaccttggtcccgactctagcttacctgcccctcctggcgagtctcctcct
tcgtcacctgccctgcagacatcttccctttcttccgggcagctgccgcctctcttgacc
ccaaccaatccctcttccccccagccctgtcctcctgtgttaactgttgccaccccaccc
cctccgctgcttcccactgtacctcttgcagccccctcttccggggcatcccctcatccg
tgtccctctccactctcgaacgccaccgcacagtccccacttccaattctttccccaacg
gtgtctccctcgccatctcccattccttccgtggagcccctcacgtctgctgcctcaccg
gggcctccgacgctctcttcgtcttcctcctcatctgcttcgccttcgttctcttcttcg
tcctcctcctcttctccttcgccacctcctctctcagcagtatcgtctgtggtttcctct
ggggataatctggaagcctctctgcccatgatatcttttaaacaggaggaattagagaat
gaaggtccgaaagcgagggaagaatcccagtctgccactgcgcgggatattgttcaggag
acattcaacaaaaattttgtctgcaacgtctgtgaatcacctttcctttccattaaagat
ctaaccaaacatttatccattcacgctgaggaatggcccttcaaatgtgaattttgtgtg
cagctctttaaggctaaaactgatttgtcagaacatcgctttttgcttcatggagttggg
aatatctttgtgtgttcggtttgtaaaaaagaatttgcgtttttgtgcaacctgcagcag
caccagcgagacctccaccccgacacggtgtgcacacaccgtgagtttgaaagcggcacc
ctgaggccccagaacttcacagatcccagcaaggcccacgcagagcatatgcagagtttg
ccggaagatcctttagaaacgtctaaagaagaagaggagctgaacgattcctcagaagag
ctttacacgaccataaagataatggcttctggaataaagacgaaagatccagatgttcga
ttgggtctcaatcagcattacccaagctttaaaccacctccatttcagtaccatcaccgc
aaccccctaggcattggtgtgacggccacaaatttcactacacacaatatcccacagacg
tttactaccgccattcgctgcaccaagtgtgggaaaggtgtggacaacatgcctgagctg
cacaaacacatcctggcatgtgcttccgctagcgacaagaagaggtataccccgaagaaa
aatccagtcccgctgaaacagactgtgcagcccaaaaacggtgtggtggttttggacagc
tctgggaagaatgccttcagacgaatgggacagcccaaaagactgaactttagcgttgag
ctcagcaaaatgtcctcaaataagctcaagttaaatgcgttgaagaaaaaaaaccagctt
gtccagaaagccatccttcagaaaaacaagtctgcaaagcagaaagccgacctaaaaaat
gctcctgagtcgtcctcgcacatctgcccgtactgcaacagagagttcacgtacatcggg
agcctgaacaagcacgccgctttcagctgtcccaagaaacccctttctccttccaagaga
aaagcttcccattcatccaagaaaggaggacacccatcacctgcaagtagtgacaggaac
aacggcagcagccaccgcagacggacagcggatgcagagatcaaaatgcaaagcatgcag
gcgccgttgggcaagaccagagctcgcagctcgggccctgcacaggtcccaccgccctcc
tcgtccttcaggtccaagcagaatgttaaatttgcagcttcggttaagtccaaaaaacca
agctcctccttaaggaacttaagcccgatacgaatggccaaaatgactcacagcgacagc
aagaagcccaaggctgcagccaggaatcatgcagctcagctctcgggcaagacgtctcgg
agcctgcacgtgagggcacagaaaagcagagctgtcttacagagcaagtcggccttggcc
agtaagaagcggacagacaggttcagtgtaaaatctagagaacgaagtggggggccgatc
acccgaagcctgcagctggcagctgccgccgacccgagtgagaacagaagggaggacggc
agcggcaagcaggagctgaaggacttcagctacagtctccgcctggcatctcgatgtcct
ccgccagctgccccgtacatcaccaggcagtgtaggaatgtcaaggccacagctgcagcc
cagttccagggatccctcttcaaagagtag
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integrated database retrieval system
