Globicephala melas (long-finned pilot whale): 115864387
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Entry
115864387 CDS
T11080
Symbol
SEC31A
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115864387 (SEC31A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115864387 (SEC31A)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
gmf02044
]
115864387 (SEC31A)
Membrane trafficking [BR:
gmf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
115864387 (SEC31A)
Secretion system [BR:
gmf02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
115864387 (SEC31A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_TEP1_2nd
TPR_Sec16
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Prp18
SRA1
Motif
Other DBs
NCBI-GeneID:
115864387
NCBI-ProteinID:
XP_060155547
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Position
5:complement(99455297..99534427)
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AA seq
1221 aa
AA seq
DB search
MKLKEIDRTAMQAWSPAQNHPIYLATGTSAQQLDATFSTSASLEIFELDLSDPSLDMKSC
ATFSSSHRYHKLIWGPHKMDSKGDVSGVLIAGGENGNIILYDPSKIIAGDKEVVIAQNDK
HTGPVRALDVNIFQTNLVASGANESEIYIWDLNNFATPMTPGAKTQPPEDISCIAWNRQV
QHILASANPSGRATVWDLRKNEPIIKVSDHSNRMHCSGLAWHPDVATQMVLASEDDRLPV
IQMWDLRFASSPLRVLENHARGILAIAWSMADPELLLSCGKDAKILCSNPNTGEVLYELP
TNTQWCFDIQWCPRNPAVLSAASFDGRINVYSIMGGSADGLRQKQVDKLSSSFGNLDPFG
TGQPLPPLQIPQQTAQHRIVLPLKKPPKWVRRPVGASFSFGGKLVTFASVRTQPQQGAEQ
QLQQHHVRISQVVTEEEFLSRSAQLQQVVQSQGFVSYCQKKIDASQTEFEKNVWSFLKVN
FEDDSRGKYLELLGYRKEDLGKKIASALNKVDGPDVALKDSDQVAQSDGEESPAAEEQLL
GERIKEEKQESEFLPSAGGTFNISISGDIDGLITQALLTGNFESAVDLCLHDNRMADAII
LAIAGGQELLARTQKKYFAKSQSKITRLITAVVMKNWKEIVESCDLKNWREALAAVLTYA
KPDEFSALCDLLGTRLESEGDSLLQTQACLCYICAGNVEKLVACWTKAQDGSNPLSLQDL
IEKVVILRKAVQLTQAMDTNTVGVLLAEKMSQYANLLAAQGSIAAALAFLPDNTNQPNIV
QLRDRLCRAQGNPAGQQESPKIPYERQQLPKGRPGPVAGHTQMPRVPAQQYYPHGENPPP
PGFIMHGNVNPNVATAQLPTSPGHMHTQVPPYPQPQPYQPAQQYSFGTGGSAVYRPQQPV
APSASNAYPNTPYISSASSYSGQSQLYTAQHQASPPTSSSTASFPPPPSSGASFQHGGPG
APPSSSAYALAPGATGTLPAAGELPASQRTGSQNGWNDPPALNRVPKKKKMPENFTPPVP
ITSPIMNPLGDHQSQMLQQQPSAPVPLSSQASFPQPHLPGGQPFHGIQQPLSQPGMPPSF
SKPNIEGAPGAPIGNTMQHVQSLPTEKITKKPIPDEHLILKTTFEDLIQRCLSSATDPQT
KRKLDDASKRLEFLYDKLREQTLSPTIINGLHNIARSIETRNYSEGLTIHTHIVSTSNFS
ETSAFMPVLKVVLTQANKLGV
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaaggaaatagatcgtacagccatgcaggcatggagccctgcccagaatcat
cccatttacctagctacaggaacatctgctcaacaattggatgcaacatttagtaccagt
gcttctcttgagatatttgaattagacctttctgatccatccttggatatgaaatcttgt
gccactttctcttcttctcacaggtaccacaagttgatttgggggcctcataagatggat
tccaaaggagatgtctctggagttctgattgcaggtggtgaaaatggaaatattattctt
tatgatccttctaaaattatagctggtgataaggaagttgtgattgcccagaatgacaaa
catactggcccagtgagagccttggatgtgaacattttccagactaatctggtggcctct
ggtgctaatgaatctgaaatctacatttgggatttaaacaattttgcaactccaatgaca
ccaggagccaaaacgcagcccccagaagatatcagctgcattgcatggaacagacaagtt
cagcatattttggcatcagccaatcccagtggccgggccactgtgtgggatcttagaaaa
aatgaacccatcatcaaagtcagtgatcatagtaacaggatgcattgctctgggttggcg
tggcatcctgatgttgctactcagatggtccttgcctctgaggatgacaggttaccagtg
atccagatgtgggatcttcgctttgcctcctctccactccgtgtcctggaaaaccatgcc
agggggattttggcaattgcttggagcatggcggatcctgaattgttgctgagctgtgga
aaagatgctaagattctctgttccaacccaaacacaggagaggtgttatatgaacttccc
accaacacacagtggtgctttgatattcagtggtgtcccagaaatcctgctgtcttatca
gctgcttccttcgatgggcgtatcaatgtttattctatcatgggagggagtgcagatggt
ttaaggcagaaacaagttgacaagctttcatcgtcttttgggaatcttgatccgtttggc
acaggacagccccttcctccgttacaaattcctcagcagactgctcagcatcgtatagtg
ttgcctctgaagaagccacccaagtgggtccgaagacctgttggggcttccttttcattt
ggaggcaaactggttacctttgcgagtgtcagaacacagcctcagcagggagctgagcag
cagctgcagcagcaccacgtgcgcatcagtcaggtcgtaacagaagaggaattccttagc
cggtcagcccaacttcagcaggtcgtgcagtcacaaggatttgtcagttattgtcagaag
aagattgatgcttctcagactgagtttgagaaaaatgtgtggtcctttttgaaggtaaac
tttgaggatgattctcgtggaaaataccttgaacttctaggatatagaaaagaagaccta
ggaaagaagattgcttcggccttgaacaaagtggatggacctgatgtggctcttaaagac
tctgaccaagtagcacagagtgatggggaggagagccctgctgctgaagagcagctcttg
ggagagcgcattaaagaggaaaaacaagaatctgaatttctaccatcagctggaggaaca
tttaacatctccatcagtggggatattgatggtttaattactcaggctttgctgacgggt
aactttgagagtgctgttgacctttgtttacatgataaccgcatggctgatgccattata
ttggccatagcaggtggacaagaactcttggctcgaacccagaaaaagtactttgcaaaa
tcccaaagcaaaattaccaggctaattactgcagtagtgatgaagaactggaaagagatt
gtcgagtcttgtgatcttaaaaattggagagaggctttagctgcagtattgacttatgct
aaaccagatgaattttctgccctttgtgatcttttgggaaccaggcttgaaagtgaaggt
gatagcctcctgcagactcaggcatgtctctgctatatttgtgcagggaatgtagagaaa
ctagttgcatgttggactaaagctcaagatggaagcaatcctttgtcccttcaggatctg
attgagaaagttgtcatcctgcgaaaagctgtacaactcacccaagccatggacactaat
actgtaggagttcttttggctgagaagatgagtcagtatgccaatttgttggcagcccag
ggcagtattgctgcagccctggcttttcttcctgataacaccaaccagccaaatattgtg
cagcttcgtgacagactttgtagagcacaaggaaatccagcaggacaacaggagtcacct
aaaattccttatgagaggcagcagctgcccaagggcaggcctggaccagttgctggccac
acacagatgccaagagttccagctcaacaatattatccccatggagaaaatcctccacct
ccaggcttcataatgcatgggaatgttaatccaaatgttgccacagctcagcttcccaca
tctcctggtcatatgcacacccaggtaccaccttatccacagccacagccttatcaacca
gcccagcagtattccttcggaacaggggggtcagcagtgtatcgacctcagcaacctgtt
gctccttctgcttcaaacgcttaccctaacaccccgtacatatcttctgcttcttcctat
tctgggcagtctcaactatacacagcacagcaccaggcctctccacctacctccagctcc
actgcctctttccctcctcctccttcctctggagcatccttccagcatggcggaccagga
gctccaccgtcatcttcagcttatgcgctggctcctggagcaacaggtacactgcctgct
gccggcgagctgcctgcatcccagagaacaggttctcagaatggttggaatgatcctcca
gctttgaacagagtacccaagaagaagaagatgcctgagaactttacgcctcctgttccc
atcacatcaccaatcatgaaccccttgggtgaccaccagtcacagatgctgcagcagcaa
ccttcagctccagtaccactatcaagccaagcttcattcccacagccacaccttccaggt
ggccagcccttccatggcatacagcaacccctcagtcaaccaggcatgcctccgtctttt
tcaaagcccaatattgaaggtgcccctggagctcctattggaaataccatgcagcatgtg
cagtctttgccaacagaaaaaattaccaagaaacctattccagatgaacacctcattcta
aagaccacatttgaggatcttattcagcgctgcctctcttcagccacagatcctcaaacc
aagaggaagctagatgatgccagcaaacgtttggagtttctatatgataaacttagggaa
cagacactttcaccaacaatcatcaatggtttacacaacatcgcaaggagcattgagact
cgaaactactcagaaggattgaccatacatacccacatagttagcaccagcaacttcagt
gagacctctgcttttatgccagttctcaaagttgttctcacccaggccaataagctgggt
gtctaa
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integrated database retrieval system
