KEGG   Globicephala melas (long-finned pilot whale): 115864397
Entry
115864397         CDS       T11080                                 
Symbol
HELQ
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
gmf  Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gmf03400]
    115864397 (HELQ)
Enzymes [BR:gmf01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     115864397 (HELQ)
DNA repair and recombination proteins [BR:gmf03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    115864397 (HELQ)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII DUF7898 HHH_5 DNA_pol_lambd_f DUF4332
Other DBs
NCBI-GeneID: 115864397
NCBI-ProteinID: XP_030733912
LinkDB
Position
5:complement(99968837..100009328)
AA seq 1079 aa
MDEGCSRIRRRVSVRKRNRRSLESVFAALTAAELKPGDEEKEDEDEETVAGSRRRKTMDV
QPVENIDSEEDMFGDYDSFAENSFLAQVDDLEQKYLQLPEHRKHATDHATEDLCSESIKH
NTLSITTVGDCTELKIDEHTKNQSGHEDVPIDPEADVLYDIPSSQVLFFENLYNSSNDLG
DPSTEERDWNSSSHKTVNEELPINNVEQPQQTDESSSKVRTSSDANRRKSLKDHLKNTMT
GNAKAQTPVFSRTKQLKETLLSEEINVAKKTIESSLDDLGPFYSLPSKVRDLYVQFKGIE
KLYEWQHACLTLNSVQERKNLIYSLPTSGGKTLVAEILMLQELLCRRKDVLMILPYVAIV
QEKISGLSSFGVELGFFVEEYAGSKGKFPPIKRREKKSLYIATTEKGHSLVNSLIETERI
NSLGLVVVDELHMIGEGSRGAILEMTLAKILYTSKTTQIIGMSATLNNVEDLQEFLQAEY
YTSQFRPVELKEYLKIKDTIYEVDSKAENGMTFSRLLNYKYSDTLKKMDPDHLVALVTEV
IPNYSCLVFCPTKKNCENVAEMICKILSKEYLKHKEKEKHEVIKNLKNISNGNLCPVLKH
TIPFGVAYHHGGLTSDERKLLEEAYSAGVLCLFTCTSTLAAGVNLPARRVILRAPYVAKE
FLKKNQYKQMIGRAGRAGIDSTGESILILQEKDKQQVLELISRPLENCYSQLVQEFTKGI
HTLFLSLIGLKIATNLGDIYHFMSGTFFGVQQKILLKERSLWEITVESLRYLTEKGLLQN
DTILTEKGLLQKDAIHGSEEEFQYSFHITKLGRASFKGAIDLAYCDSLYRDLKKGLEGLV
LESLLHLIYLTTPYDMASQCHPDWMIYFRQFSQLSPAEQNVAVLIGVSENFIGKKASGQA
IRKKVDKNIVNRLYLSFVLYTLLKETNIWSVSEKFNMPRGYIQNLLSGAAAFSSCVLHFC
EELEEFWVYRALLVELTKKLTYCVKAELIPLMEVTGVLEGRARQLYNAGYKSLMHLANAN
PEVLIKTIDHLSRRQAKQIVSSAKLLLHEKAEALQEEVEELLRLPSDFPGIVASSVEKA
NT seq 3240 nt   +upstreamnt  +downstreamnt
atggatgaaggttgttcccgcatccgccggcgggtgtcggtccgcaaaaggaaccgtcgt
agcttggagagcgtttttgccgccctcaccgcggccgagcttaagcccggcgatgaggag
aaggaggacgaggacgaggagacggtggctgggagccggcggcgaaaaaccatggacgtg
cagccggtcgagaatattgacagtgaagaggacatgtttggtgactatgatagctttgct
gaaaactcttttttagctcaagttgatgacctggaacaaaaatatttgcaacttcctgaa
cataggaaacatgctacagaccatgccactgaagatctttgttcagaaagcattaaacac
aacacactcagcattactactgtaggcgactgtactgaattaaaaatagatgagcacacg
aagaaccagagtgggcatgaagatgtccctattgatcctgaagctgatgttttgtatgat
ataccttcttcacaggttttattctttgaaaatttatataactcttcaaatgatttgggt
gatccatctactgaagagagggattggaactcatcctctcacaagactgtgaacgaggaa
ttgcccattaataacgtagagcaaccacagcaaactgatgaatcctcttccaaagtcaga
actagttcagatgcgaataggagaaaaagtcttaaagatcatctaaaaaataccatgact
ggaaatgccaaggctcaaacaccagtattttctaggactaaacagctcaaagagactctt
ctatctgaagaaattaatgttgctaagaaaacaattgagtcatcattagatgaccttggt
cctttttattcattacccagcaaagtgagagacctttatgttcagttcaagggaattgaa
aaattatatgaatggcaacatgcttgcttaacattgaattctgtgcaagaaagaaaaaat
ttaatatattccttgccaacaagtggtggaaaaaccctcgtggctgagattttaatgctg
caagaactgctttgccggcgaaaagatgttttaatgatcctaccatatgtggcaattgtt
caagaaaagatttcaggtttgtcaagttttggtgtagaactgggtttctttgttgaagaa
tatgctggaagcaaaggaaaatttcctccaattaaaagaagggaaaagaaatcactatat
attgccactactgaaaaaggacatagtctggtgaactctttgattgaaaccgaaaggatt
aacagtctgggtctggttgttgtagatgagttgcacatgattggtgaaggaagccgtggg
gctatactggaaatgactctagcaaaaatcctctacactagcaaaacaactcaaattatc
ggtatgagtgcaacattaaacaatgttgaagacctacaagagttcctgcaagcagaatat
tacacgagtcagtttagaccagttgaattaaaagaatatctgaaaataaaggacacaata
tatgaggttgacagcaaagctgagaatggcatgactttttcacgtctccttaactataag
tattctgatactctgaaaaagatggatcctgatcacttggtagcattggtgacagaagtt
attcccaattattcctgcttagttttttgtcccactaagaagaactgtgaaaatgtagca
gaaatgatatgcaaaattttaagcaaggaatatctgaaacacaaagagaaagaaaaacat
gaggtgattaagaacttgaagaatatcagcaatggcaacctgtgtcctgttttaaagcac
accatcccatttggagttgcttatcaccatggtggtttaacgagtgatgaaaggaagctc
ttggaagaggcctactccgcaggagttctctgcctttttacctgcacatccaccctagca
gcaggtgttaacctaccagctcgaagagttattttaagagccccctatgttgctaaagaa
tttttaaagaagaatcaatataaacagatgattggcagggctggccgtgctggaatagat
tctactggggagagtattcttatattgcaagaaaaagacaagcaacaggtattggagtta
ataagcagaccattggaaaactgttatagccaacttgttcaagaattcaccaagggaatc
catactttgtttctctctttgattggtttgaagattgcaacaaatctcggtgacatatat
cacttcatgagtggtacattttttggtgttcagcagaagattttgttgaaagaaagaagt
ctctgggaaataactgtcgaatcacttagatacttgacagaaaaaggactcctacaaaac
gatactattttgacagaaaaaggacttctacaaaaagacgctattcatgggtcggaagaa
gagttccaatatagttttcacattacaaagttgggacgagcttcttttaagggagctata
gatttggcttattgtgacagtctctacagagacttgaagaaaggtcttgaaggacttgtg
cttgaaagccttcttcatctaatttacctaacaactccctatgatatggcttctcagtgt
caccctgattggatgatatacttcaggcagttcagccagctcagcccagcagaacaaaat
gtggctgttctgattggagtctctgagaactttattgggaagaaagcatcaggtcaagct
atcaggaagaaggtggacaagaatattgtcaacagactatacctgtctttcgttctttat
accttgctcaaagagaccaacatttggagtgtgtctgaaaaattcaatatgcctcgagga
tatatacaaaaccttctctctggagctgccgcattctcctcttgtgtgttacacttctgt
gaggaacttgaggagttctgggtttatagagcccttttggtagaacttaccaagaagttg
acttactgtgtaaaggcagagctaatccctctcatggaagtgactggagttttagagggt
cgagcaagacagttatacaatgcaggttataaaagtctaatgcacttagctaatgcaaat
cctgaagtgctgataaaaacaattgatcatttatcaagacgccaggccaagcaaattgtt
tcatcagccaagttgctgttgcatgagaaagcagaggctttgcaagaagaagtagaagag
ttattgagactgccttctgatttccctggtattgtggcctcttctgttgaaaaggcatga

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