Globicephala melas (long-finned pilot whale): 115864690
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Entry
115864690 CDS
T11080
Symbol
ACAN
Name
(RefSeq) aggrecan core protein isoform X1
KO
K06792
aggrecan 1
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gmf00535
]
115864690 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
gmf00536
]
115864690 (ACAN)
04091 Lectins [BR:
gmf04091
]
115864690 (ACAN)
Proteoglycans [BR:
gmf00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
115864690 (ACAN)
Glycosaminoglycan binding proteins [BR:
gmf00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
115864690 (ACAN)
Lectins [BR:
gmf04091
]
C-Type lectins
Lecticans
115864690 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
Sushi
EGF
hEGF
EGF_CA
I-set
ig
Ig_3
EGF_3
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
115864690
NCBI-ProteinID:
XP_060149852
LinkDB
All DBs
Position
2:complement(38171776..38236330)
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AA seq
2042 aa
AA seq
DB search
MTTLLFVFLTLRVIAAAISVEVSDPDNSLSVSIPEPSPLRVLLGSSLTIPCYFIDPMHPV
TTAPSTAPLAPRIKWSCISKEKELVLLVATEGQVRVNSAYRDRVTLPNYPAIPSDATLEI
QNLRSNDSGIYRCEVMHGIEDSKATVEVVVKGIVFHYRAISTRYTLDFDRAQRACLQNSA
IIATPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREACYGDKDEFPGVRTYGIRDTNE
TYDVYCFAEEMEGEVFYATSPEKFTFQEAANECRRLGARLATTGQLYLAWQSGMDMCSAG
WLADRSVRYPISKARPNCGGNLLGVRTVYLHANQTGYPDPSSRYDAICYTGEDFVDIPED
FFGVGGEEDITIQTVTWPDVELPLPRNITEGEARGSVILTVKPVFDITPTALEPKEPFTF
APEVGATAFSEAENRTGEATRPWAFPEESTPGLGAPTAFTSEDLVVQVTAAPGATEVPGQ
PRLPGGVVFHYRPGSSRYSLTFEEAQQACLRTGAVIASPEQLQAAYEAGYEQCDAGWLQD
QTVRYPIVSPRTPCVGDKDSSPGVRTYGVRPPSETYDVYCYVDRLDGEVFFATRPEQFTF
QEAQEFCETQNATLATTGQLYAAWSQGLDKCYAGWLSDGSLRYPIVTPRPACGGDKPGVR
TVYLYPNQTGLLDPLSRHHAFCFRGIPAAPSPGEEEGRTPTERPEVEAWITTEVGPSVAA
VPVGEETTAIPEFTTEPENQTEWEPAYTPAGTSPLPGVPPTWLPTSTATEESTEAPSATE
VPSASEEPLPSEKPLPSEEPFPSEEPFPSEEPFPSEKPFPSEELFPSEEPSTLSAPVPSR
TELPGSGEVSGVPEVSGDFTGSGEISGHLDSSGQPSGEIASGLPSEDLDFSGLTSTVGSG
LPVESGLASGDEDRITWTTTPEVDRLPSGGEVPEGSVSGVGDLSGLPSVGEDHLETSASG
VGDLSGLPSGREDLETSVSGVEDLSGLPSGEGPETSASGIEDLSRLPSGEGPEASASGVE
DLSGLPSGGEGLETSVSGVEDLSGLPSVGEDHLETSASGVGDLSGLPSGRESLEISASGA
EDLSGLTSGKEDLIGSASGVLDLGRIPSGTLGSGQAPEAGGLPSGFSGEYSGVDLGSGPS
SGLPDFSGLPSGFPTVSLVDTTLVEVVTATTAGELEGRGTIGISGAGETSGLPFSELDIS
GGASRLSSGAELSGQASGTPDISGETSGLFGVSGQPSGFPDISGGTSGLFEVSGQPSGFS
GETSGVTELSGLSSGQPEISGEASGVLSGIGPPFGITDMSGETSGIPDLSGQPSGLPGFS
GTTSGIPDLVSSAVSGSGESSGITFVDTSLVEVTPTTFKEEEGLGSVELSGLPSGEADLS
GTSGIVDVSGLSSGVIDSSGFTPQPPEFSGLPSRVAEVSGESSGAESGSSQPSGAYDGRG
LPSGFSTVSLVDRTLVESVTQVPTAQEAGEGPSGILELSGAPSGAPDMSGDHSGLLDLSG
LQSGLVEPSGEPSSTPYFSGDFSGTTDVSGESSAPTSTSGEASGLPEVTLIISEFVEGVT
EPTVSQELGQRPPVTYTPQRFESSGETSASGDTPRFPGSGVEASSVPESSSETSAYPEAE
VGASAVPEASGGTSRSPDLSGTTSTFHEADLEGASGLGVTGSTSAFQEGPREGSAAPEVS
GESTTTYDVGTEASGSPSAIPMASGDRTEISRDLSGHTSGLDVVISTTILESKWTQQTQS
PAEAHLEMESSSPEHSGEETQTAETPTSPTDASIPNSPGGTDESEATMADIDECLSSPCL
NGATCVDAIDSFTCLCLPSYQGDLCEIDQKLCEKGWTKFQGHCYRHFPDRATWVDAEGQC
RKQQSHLSSIVTPEEQEFVNNNAQDYQWIGLNDKTIEGDFRWSDGHSLQFENWRPNQPDN
FFATGEDCVVMIWHEKGEWNDVPCNYQLPFTCKKGTVACGEPPVVEHARIFGQKKDRYEI
NSLVRYQCTEGFVQRHVPTIRCQPSGHWEAPRITCTDPSTYKRRLQKRSSQPLRRSRPST
AH
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttactcttcgtgtttctgactctgagagtcatcgcagcagccatctcagta
gaagtttcagaccctgacaactcgctgagtgtcagcatccctgaaccgtccccgctgcgg
gtcctcctggggagctccctcaccatcccctgctacttcatcgaccccatgcaccccgtg
accaccgccccctccaccgcccccctcgccccaagaatcaagtggagctgcatttccaag
gagaaggagctggtgctgctggtggcgactgaagggcaggtgcgggttaacagtgcctac
cgagacagggtcacgctgcccaactacccggccatccccagcgacgccaccctggaaatc
cagaacctgcgctccaatgactctgggatctatcgctgcgaggtgatgcacggcatcgag
gacagcaaggccaccgtggaggtcgtggtgaaaggcatcgtgttccattacagagccatc
tccacacgctacaccctggacttcgacagggcgcagcgagcctgcctgcagaacagcgcc
atcatcgccacgcccgagcagctgcaggccgcctatgaggacggcttccaccagtgcgac
gccggctggctggcagaccagactgtcaggtaccccatccacactccaagggaagcctgc
tatggggacaaggatgagtttcccggtgtaagaacctacggcatccgtgacaccaatgaa
acctatgacgtgtactgcttcgcagaggagatggagggcgaggtcttttatgcaacatcc
ccggagaagttcaccttccaggaggcagccaatgagtgccggcggctgggcgcccggctg
gccaccacgggccagctctacctggcctggcagagtggcatggacatgtgcagcgccggc
tggctggccgaccgcagcgtgcgctaccccatctccaaggcccggcccaactgcgggggc
aacctcttgggcgtgaggactgtctacctgcacgccaaccagacgggataccccgacccc
tcatcccgctacgacgccatctgctacacaggtgaagactttgtggacatcccagaagat
ttcttcggggtgggtggtgaggaggacatcaccatccagacggtgacctggcctgatgtg
gagctgcctttgccacgaaacatcaccgagggtgaagcccgaggcagcgtgatcctcaca
gtgaaacccgtctttgacatcacccctaccgccctggagcccaaggagcccttcactttt
gcccccgaagtaggggccaccgccttctctgaggccgagaacaggactggagaggctacc
cggccctgggcctttcccgaggagtccacacctggcctgggcgctccgacggccttcacc
agcgaggacctcgttgtgcaggtgaccgcagccccaggtgcaaccgaggtccctgggcag
ccacgactgccagggggagttgtgttccactaccgcccgggctcctcccgctactcgctg
acctttgaggaggcccagcaggcctgcctgcgcaccggggccgtcatcgcctcgcccgaa
cagctccaggccgcctatgaagcaggctacgagcagtgtgacgctggctggctgcaggac
cagaccgtcagataccccattgtgagcccacggaccccatgtgtgggtgacaaggacagc
agcccgggggtccggacctatggcgtgcgaccaccatcagaaacctatgatgtctactgc
tacgtggacagactcgatggggaggtgttcttcgccacacgcccggagcagttcaccttc
caggaagcacaggagttctgtgaaacccaaaatgccacactggccaccacgggccagctc
tatgctgcctggagccagggcctggacaagtgctacgctggctggctatctgacggcagc
ctccgctaccccatcgtcaccccaaggcctgcctgcggtggggacaagccaggtgtgaga
accgtctatctctaccccaaccagacaggcctcctggacccgctgtcccggcaccacgcc
ttctgcttccgaggcatcccagcggcgccctctccaggagaagaggagggtaggacaccc
acagagcgccctgaggtggaagcctggatcactactgaagtggggcccagcgtggctgct
gtccctgttggggaggagacgactgcaatcccagagttcaccactgagccagaaaaccag
acggaatgggagcccgcctacacgccagcgggcacttccccactgccaggggtccctcct
acatggcttcccactagcacagcaacagaggagagcacagaagccccttctgcgacggaa
gtgccctcagcctcggaggagccattgccctcagaaaagccgttgccctcagaagaacca
ttcccctccgaggagccattcccctcagaggaaccgttcccctcagagaaaccgttcccc
tcagaggagctgttcccctcagaggagccatccacactttcagccccagtacccagcagg
actgagctgccaggctctggggaggtatctggggtgcctgaagtcagtggtgacttcaca
ggcagtggcgaaatttcaggacacctagactccagtgggcagccttcaggggaaattgca
agtggactgccctctgaagaccttgacttcagtgggctcacctctacagtgggctcaggc
ctgcctgtggaaagtggactggcttcaggagatgaagatagaattacgtggaccaccact
cctgaagttgacaggttgccctctggaggtgaggtcccagagggctctgtctctggagta
ggggacctcagtggacttccttctgtaggtgaggatcatctagagacctctgcttctgga
gtaggggaccttagtggacttccttctggaagagaggacctagagacctctgtctctgga
gtagaggacctcagtggacttccttctggagaaggtccagaaacctctgcctctggaata
gaggatctcagcagacttccttctggagaaggtccagaagcctctgcctctggagtagag
gaccttagtggacttccttctggaggagagggtctagagacctctgtctctggagtagag
gacctcagtggacttccttctgtaggtgaggatcatctagagacctctgcttctggagta
ggggaccttagtggacttccttctggaagggaaagtctggagatctctgcttctggagct
gaggatcttagtgggttgacttctggaaaagaagacttgattgggtcagcttctggagtc
ttggaccttggcagaataccttctggaactctaggaagtgggcaagctccagaagcaggt
ggccttccctctggatttagtggtgagtattctggggtggaccttggaagtggcccatct
tctggccttcctgacttcagtggacttccatctgggttcccaactgtctccctagtggat
actacattggtggaagtggtcacagccaccactgcaggtgaactagaaggaaggggaacc
attggcatcagtggtgctggagaaacatctgggctgcccttcagtgagttggacattagt
ggaggagcaagcagactctcttcaggagctgaactcagtggccaggcatctgggactcct
gacatcagtggggaaacatctggactctttggtgtcagtggacagccatcagggtttcct
gacattagtgggggaacatctggactttttgaggtcagtgggcagccatcagggttttct
ggggaaacatctggtgtgactgagcttagtggactgtcctccggacaaccagaaatcagt
ggagaagcttctggagttctttctggcattggtccaccatttggcataaccgacatgagt
ggagaaacgtccgggatccctgatctcagtgggcagccatcagggttaccagggttcagt
gggacaacatccggaatccctgacctggtttccagtgccgtgagtggcagtggtgaatct
tctggcattacattcgtggacaccagtttggttgaagtgaccccaactacatttaaagaa
gaagaaggtttagggtccgtggaactcagtggcctcccttcaggagaggcagatctctca
ggcacatctgggattgtggatgtcagtggactctcttctggagtaattgactccagtggg
tttacaccccagcctccagaattcagtggcctgccaagcagagtagctgaggtcagtgga
gagtcctctggagctgagagtgggagcagccagccctctggagcatatgacggccgtgga
cttccatctggtttctccactgtctctcttgtagacagaactttggtggaatctgtaacc
caggttcccacagcccaagaagcaggagaagggccttcaggcattttggaacttagtggt
gccccgtctggagcaccagacatgtctggagaccattcaggacttttggacctaagtgga
cttcagtctggactggtagagcccagtggagagccatcaagtactccatattttagtggg
gacttttctggcaccactgatgtaagcggagaatcctctgcacccacgagcaccagtggg
gaggcctcaggacttccagaagttactttaatcatttctgagttcgtggagggtgttact
gagcctactgtttcccaggaactgggccaaagaccccctgtaacatacaccccccagcgt
tttgagtccagtggagaaacctctgcatctggggatacaccaaggttccccgggtctggg
gtagaagcatcatcagtcccagaatctagcagcgagacgtctgcctatcctgaggctgag
gtgggagcatctgctgtccccgaggccagcggaggcacttccaggtcccctgatctgagt
ggaaccacctccaccttccatgaagctgatctggagggagcctcaggcctgggagtgaca
ggtagcacctcagcctttcaggaaggccccagggagggctcggctgccccggaagtgagt
ggagagtcaaccaccacctatgatgtgggcacagaggcatcaggctcaccttcggccatt
cccatggcttctggagacaggactgaaatcagcagagacctgtctggtcacacctcgggg
ttggatgttgtcatcagcaccaccatcctggaatccaagtggactcagcagacccagagc
cctgcagaggcgcatctagaaatggagtcctcaagccccgagcactcaggagaagagacc
caaacagccgaaacacccacctccccaactgatgcttccatcccaaactctccaggaggg
acagatgaatcagaggcaaccatggcagacattgacgagtgcctctcaagcccttgtctg
aatggagccacctgcgtggacgccatcgactctttcacatgcttatgccttcccagctac
caaggggacctgtgtgagatcgaccagaagctgtgtgagaagggctggaccaagttccag
ggccactgttaccgccacttccccgaccgggcgacctgggtggacgccgagggccagtgc
cggaagcagcagtcacacctgagcagcatcgtcacccctgaggagcaggaatttgtcaac
aacaatgctcaggactatcagtggatcggcctgaatgacaagaccatcgaaggagacttc
cgctggtcagatggacactccttgcaatttgagaactggcgccccaaccagccggacaac
ttctttgccactggggaggactgcgtggtgatgatctggcatgagaagggcgagtggaat
gacgttccctgcaattaccagctgcccttcacgtgtaaaaagggcacagtggcctgcgga
gagccccccgtggtggagcacgccaggatcttcgggcagaagaaggaccggtacgagatc
aattccctggtgcggtaccagtgcaccgagggctttgtccagcgccatgtgcccaccatc
cggtgccagcccagcgggcactgggaggcccctcggatcacctgcacagacccctctacc
tacaagcgcagactacagaagcggagctcacagcccctgcggaggagccgccccagcacg
gcccactga
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integrated database retrieval system
