Globicephala melas (long-finned pilot whale): 115864752
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Entry
115864752 CDS
T11080
Symbol
MYO5C
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115864752 (MYO5C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115864752 (MYO5C)
04131 Membrane trafficking [BR:
gmf04131
]
115864752 (MYO5C)
03029 Mitochondrial biogenesis [BR:
gmf03029
]
115864752 (MYO5C)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmf04812
]
115864752 (MYO5C)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
115864752 (MYO5C)
mRNA cycle factors
P-body specific factors
115864752 (MYO5C)
Membrane trafficking [BR:
gmf04131
]
Others
Actin-binding proteins
Myosins
115864752 (MYO5C)
Mitochondrial biogenesis [BR:
gmf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
115864752 (MYO5C)
Cytoskeleton proteins [BR:
gmf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
115864752 (MYO5C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
AAA_22
nSTAND3
Rnk_N
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
115864752
NCBI-ProteinID:
XP_069901020
LinkDB
All DBs
Position
2:80714983..80831428
Genome browser
AA seq
1742 aa
AA seq
DB search
MAVAELYTQYNRVWIPDPEEVWKSAEIAKDYRVGAKVLRLLLEDGTELDYSVDPESLPPL
RNPDILVGENDLTALSYLHEPAVLHNLRIRFAESKLIYTYSGIILVAMNPYKQLPIYGDA
IIHAYSGQNMGDMDPHIFAVAEEAYKQMARNNKNQSIIVSGESGAGKTVSARYAMRYFAT
VSKSSTNARVEDKVLALNPITEAVGNAKTTRNDNSSRFGKYTEISFDERNQIIGANMRTY
LLEKSRVVFQSENERNYHIFYQLCASAQQSEFKHLKLGSAEEFNYTRMGGSTIIEGVNDR
ANMIETQKTFTLLGFKEDFQMDVFKILAAILHLGNVQIIAVGNERSAVSEDGRHLEVFCE
LLGLESVRVAQWLCNRKIITNSETVVKPMTRSQAINARDALAKKIYAQLFDFIVERINQA
LQFSGKQHTFIGVLDIYGFETFDANSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKEDI
PWTLIDFYDNQPVIDLIEAKMGILELLDEECLLPHGTDENWLQKLYNNFVNKNSLFEKPR
MSNTSFIIQHFADKVEYKCEGFLEKNRDTVYDMLVEILRASKFHLCAHFFQENPVPSSPF
GSAITVKSAKPVIKPNNKHFRSTVGSKFRSSLYLLMETLNATMPHYVRCIKPNDEQLPFE
FDSKRIVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYGILMTKQELSFSDKKEVCKVI
LHRLIQDSNQYQFGKTKIFFRAGQVAYLEKLRLDKLRQGCVVIQKHIRGWLQRKKFLRER
RAALIIQQYFRGQQTVRKAVTATALKEAWAAIIIQKYCRAYLVRSLYQLIRVAAITIQAY
TRGFLARRRYRKMLEEHKAVILQKYARAWLARRRFQNIRRFVLNIQLTYRVQRLQKKLED
QNRENHGLVEKLTSLAALQAGDVEKIQKLESELDRAATHRQNYEEKGKRYKASVEEKLAK
LQKRNSELEIQKEQIQLKLQEKTDELKEKMDNLTKQLFDDVQKEERQRILLEKSFELKTQ
DYEKQIRFLKEEMKALRDEKMQLQHQLEGERVTSDGLKGEVARLSKQAKTISEFEKEIEL
LQTQKIEVEKHVQSQKREMREKVSEITKQLLESYDTEDVRSRLPPEDLEHLNEDGELWFA
YEGLKKATRILESHLQSQKDCYEKEIEALNFKVVHLSQEINHLQKLFREENDINESIRHE
VTRLTSENMMIPDFKQQIAELEKQKQDLEICLNEQAENMKGKLEELSNQLNHNQEEEGTQ
RKTIGAPNEMYTKEKEKLMDKIQEMQEASEHLRKQFETESEVKSSFRQEASRLTVEHRDL
EEVLDMKDRVIKKLQDQVKTLTKTIEKANDVHLSSGPKEYLGMLEYKREDEAKLIQNLIL
DLKPRGVVVNMIPGLPAHILFMCVRYADSLNDANMLKSLMNSTINGIKQVVKEHLEDFEM
LSFWLSNTCHFLNCLKQYSGEEEFMKNNSLRQNKNCLNNFDLSEYRQILSDVAIRIYHQF
IIIMENNIQPIIVPGMLEYESLQGICSLKPTGFRKRSSSIDDTDAYTMTSILQQLSYFYS
TMCQNGLDPEIVRQAVKQLFFLIGAVTLNSLFLRKDMCSCRKGMQIRCNISYLEEWLKDK
NLQNSLARETLEALSQAAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFE
KRVTPSFVRKVQALLSSREDSSHLMLDAKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLN
RL
NT seq
5229 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgagctgtacacgcagtacaacagggtttggattcctgatcctgaagaa
gtttggaagtctgccgaaatagcaaaggactatagagttggtgccaaagtcctgcgtctc
ctgctggaggatggaacggagctggattattccgttgatccagaatctctgcctccactt
cggaatcctgacatcctcgtgggtgagaatgacctcacggccctcagctatctccacgag
cccgctgtgctccacaatctcagaatccgctttgcagaatccaaactcatttacacctac
agtggaatcatcctggtggccatgaacccttacaagcagctgccgatatatggagatgcc
atcatccacgcctacagcgggcagaacatgggcgatatggacccgcacatatttgctgtg
gcagaagaggcatacaagcagatggccagaaataataaaaatcagtcaataattgtaagc
ggggagtcgggtgctggaaagacagtatctgctcgctatgccatgaggtacttcgccacc
gtcagcaagtccagcactaatgctcgcgtggaagacaaggttctggcgttgaaccccata
actgaggctgttggaaatgccaagaccacccgcaatgacaacagcagtcggtttgggaaa
tacacagaaatcagttttgatgagagaaatcaaattataggagccaacatgagaacttac
ctgctggagaaatccagagttgtctttcaatcagaaaatgagcgaaattaccacattttc
tatcagctttgtgcatctgcacagcagtcggaatttaaacatcttaaattggggagtgca
gaagaatttaattatacgagaatggggggcagtaccatcattgagggcgtgaatgacaga
gccaacatgatagagactcagaagaccttcacactactgggtttcaaggaagattttcag
atggatgtttttaagatcctggcagccatcctacatctgggcaatgtgcagatcatagca
gtgggcaacgagagatcggcagtcagtgaggacggccgtcacctggaggtgttctgtgag
ctcctgggcctggagagtgtcagagtcgctcagtggctgtgtaatcgcaaaatcatcaca
aactccgagacggtggtgaaacccatgaccaggtcccaggccatcaacgccagggacgcg
ctggccaaaaagatctacgctcagctgtttgacttcattgtagagagaattaatcaagcc
ttgcagttttcaggcaagcagcacacttttattggtgttttggacatttatggttttgaa
acctttgatgcgaacagctttgaacagttttgcatcaattatgctaatgaaaagctgcaa
cagcagtttaacctgcatgtctttaaacttgaacaagaagagtatatgaaggaagatatt
ccttggactctgatagatttttatgacaaccaaccagttattgacctgattgaagccaaa
atgggtattttggagttactggatgaagaatgcttgttaccacatgggactgatgaaaac
tggcttcaaaagctgtataataattttgtcaacaagaactctttgtttgaaaaacccaga
atgtcaaacacatcctttatcatccagcactttgctgataaggtagagtataaatgtgaa
ggtttccttgagaagaacagagacaccgtctatgacatgctggttgaaatcctgagagcc
agcaagtttcatctctgtgcccacttttttcaagaaaatccggttccttcttcacctttc
ggctcagcgatcacagttaaatctgcaaagccagtcatcaagccaaacaacaagcatttc
cggagcaccgtggggagcaagttccgcagctctctgtacttgctcatggagaccctcaat
gccaccatgccccactacgttcgatgcatcaaaccaaatgatgagcaattgccctttgag
tttgactccaagagaattgttcagcagctgcgagcctgtggcgttttagaaaccattcgc
attagtgcgcagagctacccttctaggtggacgtacatcgagttctacagccgctatggg
atcctcatgaccaagcaggagctttcattcagcgataaaaaggaggtgtgcaaagtcatt
ttacacaggctcatccaggattctaatcagtaccagtttggtaaaaccaaaattttcttc
agagcagggcaagtggcttatttagagaaactccggttggataaactgagacagggttgt
gttgtgatacaaaagcacatccgtggctggctccagagaaaaaaattcctccgagagaga
cgagcggccctgatcatacagcagtacttccggggtcagcaaaccgtgaggaaagctgtt
accgccacagccttaaaagaagcatgggcagccataatcattcagaagtactgtcgtgcg
tatcttgtccgcagtttgtaccaactgattcgcgtggccgccatcaccatccaggcctac
acccgaggattcctggcgaggaggaggtatcgaaagatgctggaggaacacaaggctgtg
atccttcagaagtatgcccgggcgtggctggccagacgcagattccaaaatatccgacga
tttgtgctcaacattcagcttacttacagagttcagcgtttgcagaaaaagctagaagac
cagaacagagagaaccatgggctggtggaaaagctgaccagcctggctgctcttcaggcc
ggtgacgtggagaagattcagaaactggaatcagagctggacagagcagccacccacagg
cagaattatgaggagaaggggaagaggtacaaggcttccgtggaagagaaattggcaaag
cttcagaagcgtaattcagaattggaaatacaaaaagagcaaatacagctgaagcttcaa
gagaagactgacgagttgaaagaaaaaatggacaacctcaccaagcagctctttgatgat
gtgcagaaagaagaacgacagagaatacttcttgaaaaaagttttgaactgaaaacgcaa
gactatgagaagcagatccggtttttgaaagaagaaatgaaagctctcagagatgagaag
atgcaactgcagcatcagctggagggagagcgggtcacctctgatggcctgaaaggggag
gtggcccggctgagcaagcaggcaaagacaatctctgagtttgaaaaggagatagagcta
cttcagacacagaagatagaagtggaaaaacatgtgcagtcccagaaacgggaaatgaga
gaaaaggtgtcggaaatcaccaaacaacttcttgagagctacgacactgaagatgtaaga
agcaggctccctccggaagatttggaacatttaaatgaggatggagaactttggtttgct
tatgaaggactaaagaaagcaacacgcattttggagagccatctccagtcccagaaggat
tgctacgaaaaggagattgaagctctgaacttcaaagtggtgcatctaagtcaggaaatc
aaccacctgcagaaattatttagagaagagaatgacatcaatgaaagtatccgtcatgaa
gtcaccaggctaacatcagaaaacatgatgatcccagactttaaacagcaaattgcagaa
ctggagaaacagaagcaagatcttgaaatctgcctgaatgaacaagctgaaaacatgaaa
ggaaaactagaagagttgtctaatcagttgaatcacaatcaggaagaggaaggaacacaa
agaaaaaccataggagccccaaatgaaatgtataccaaagagaaagagaagctgatggat
aagattcaagaaatgcaggaggccagcgagcacttgaggaaacaatttgaaactgaaagt
gaagtcaagagtagtttccggcaggaagcatctcgcctcactgtggagcacagggatctt
gaagaagtgttagacatgaaggacagagtgattaaaaagttacaagatcaagtgaagact
ctaaccaagacaattgaaaaagccaatgatgtgcacctgtcctcaggacccaaggagtac
cttggaatgctggaatacaagagagaagacgaggccaagctcatccaaaacctcattctt
gacctgaagccccgcggtgtggtggtgaacatgatccccgggctgccagctcacatcctg
ttcatgtgtgtacgctacgcagactctctaaatgacgccaacatgctcaagtccctcatg
aacagcaccattaatggtatcaagcaggtggttaaggaacatttagaagactttgagatg
ctgtccttttggctttccaatacttgtcatttcctcaattgcctgaagcagtacagtgga
gaagaggaattcatgaagaataacagtctacgtcagaataagaattgtttgaacaatttt
gacctttcagaatacagacagattcttagtgatgtggctatacgaatatatcatcagttc
attattataatggaaaacaacattcaaccaataatagtgccaggcatgctggagtatgag
agtctgcagggcatttgcagcctgaagcccacaggcttccggaagcggtcatccagcata
gatgacacggatgcctacacgatgacctccatcctgcagcagctgagctacttttacagt
accatgtgccagaacggcctggaccctgagatcgtgaggcaggcagtgaagcagctcttc
ttcttgattggggcggtcacgctgaacagcctcttcctgcgcaaggacatgtgctcttgc
agaaaagggatgcagataaggtgcaacatcagctacttagaagaatggcttaaagataag
aatttgcagaacagcttggccagggaaaccttggaagctctctctcaggcagcctggttg
cttcaggtcaagaagaccacagacagcgatgccaaggagatctacgaacgctgtacctcc
ctgtctgctgtgcagatcataaagatccttaactcatacacacctatagatgacttcgag
aaaagagtgactccatcctttgttcgcaaagtacaggctctcctcagtagccgagaggat
tcatcacacctgatgttggatgccaagtatctctttcaagtcacatttccttttaccccc
tctccacatgctctggaaatgatccagatccccagcagtttcaaactaggctttctcaat
agattatag
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integrated database retrieval system
