Globicephala melas (long-finned pilot whale): 115864753
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Entry
115864753 CDS
T11080
Symbol
MYO5A
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115864753 (MYO5A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115864753 (MYO5A)
04131 Membrane trafficking [BR:
gmf04131
]
115864753 (MYO5A)
03029 Mitochondrial biogenesis [BR:
gmf03029
]
115864753 (MYO5A)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmf04812
]
115864753 (MYO5A)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
115864753 (MYO5A)
mRNA cycle factors
P-body specific factors
115864753 (MYO5A)
Membrane trafficking [BR:
gmf04131
]
Others
Actin-binding proteins
Myosins
115864753 (MYO5A)
Mitochondrial biogenesis [BR:
gmf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
115864753 (MYO5A)
Cytoskeleton proteins [BR:
gmf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
115864753 (MYO5A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Myosin_N
Csm1_N
AAA_16
AAA_22
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
115864753
NCBI-ProteinID:
XP_030734578
LinkDB
All DBs
Position
2:80511518..80698298
Genome browser
AA seq
1825 aa
AA seq
DB search
MAASELYTKFARVWIPDPEEVWKSAELLKDYKPGDKVLLLHLEDGKDLEYRLDPKTKELP
HLRNPDILVGENDLTALSYLHEPAVLHNLRVRFIDSKLIYTYCGIVLVAINPYEQLPIYG
EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYF
ATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRHRIIGANMR
TYLLEKSRVVFQAEEERNYHIFYQLCASAKLPEFKMLRLGDANNFHYTKQGGSPVIEGVD
DAKEMAQTRQACTLLGISESYQMGIFRILAGILHLGNVGFMSRDSDSCTIPPRHEPLSIF
CDLMAVDFEEMCHWLCHRKLATAAETYIKPISKLQATNARDALAKHIYAKLFNWIVDHVN
QVLHSAVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE
QIPWTLIDFYDNQPCINLIESKLGILDLLDEECRMPKGTDDTWAQKLYNTHLNKCALFEK
PRLSNKAFIIQHFADKVEYQCEGFLEKNKDTVFEEQIKVLKSSKFKMLPELFQDDEKAIS
PSSATSSGRTLLTRTPAKPTKGRPGQAAKEHKKTVGHQFRNSLHLLMETLNATTPHYVRC
IKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVL
SERKQTCKNVLEKLIKDKDKYQFGKTKIFFRAGQVAYLEKLRADKLRAACIRIQKTIRGW
LLRKKFLRMRKAAITVQRYVRGHQARCYAKFLRRTKAATIIQKYWRMYVIRRRYKIWRTA
TIVLQSYLRGYLARNRYRKILREHKAVIIQKWVRGWLARTYYKRSTHAIIYLQCCFRRMM
AKRELKKLKIEARSVERYKKLHIGMENKIMQLQRKVDEQNKDYKCLMEKLTNLEGIYNSE
TEKLRSDLERLQLSEEEAKIATGRVLSLQEEIAKLRKDLEQTQCEKKSIEECADRYKQET
EQLVSNLKEENTLLKQEKEALNHLIVEQAKEMTETMEKKLIEETKQLELDLNDERLRYQN
LLNEFSRLEERYDDLKEEMTLMINVPKPGHKRTDSTHSSNESEYTFSSEIAETEDIPSRT
EEPSEKKVPLDMSLFLKLQKRVTELEQEKQVMQDELDRKEEQVLRSKAKEEERPQIRGAE
LEYESLKRQELESENKKLKNELNELRKALSEKSAPEVTAPGAPAYRVLMEQLTSVSEELD
VRKEEVLILRSQLVSQKEAIQPKNTMTDSTILLEDVQKMKDKGEIAQAYIGLKETNRLLE
SQLQSQKRSHENEAEALRGEIQSLKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLTN
ENLDLMEQLEKQDKTVRKLKKQLKVFAKKIGELEVGQMENISPGQIIDEPIRPVNIPRKE
KDFQGMLEYKKEDEQKLVKNLILELKPRGVAVNLIPGLPAYILFMCVRHADYLNDDQKVR
SLLTSTINSIKKVLKKRGDDFETVSFWLSNTCRFLHCLKQYSGEEGFMKHNTSRQNEHCL
TNFDLAEYRQVLSDLAIQIYQQLVRVLENILQPMIVSGMLEHETIQGVSGVKPTGLRKRT
SSIADEGTYTLDSILRQLNSFHSVMCQHGMDPELIKQVVKQMFYIVGAVTLNNLLLRKDM
CSWSKGMQIRYNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDDDAEAICSM
CNALTTAQIVKVLNLYTPVNEFEERVSVSFIRTIQMRLRDRKDSPQLLMDAKHIFPVTFP
FNPSSLALETIQIPASLGLGFISRV
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgtcggagctctacacaaagtttgccagggtttggatacctgatcccgaggaa
gtttggaagtcagcagagttgctcaaagattataagccaggagataaagtcctcctgctt
caccttgaggatggaaaggatttggaatatcgtctagatccaaagacgaaggagctgcct
cacttaagaaaccctgacatacttgtgggtgaaaatgacctcacagccctcagctatctt
cacgagcctgctgtactccacaatctcagagtccgctttattgattccaaacttatttat
acatattgtggtatagtcctagtagctataaatccttatgagcagctgcctatttatgga
gaagatattatcaatgcatacagcggtcagaacatgggcgatatggatccacatatcttt
gcagtagctgaagaagcttacaagcaaatggccagagatgaacgaaatcagtccatcatc
gtaagtggagagtctggggcaggaaaaacagtttcagctaagtatgccatgcgatacttt
gcaactgtaagtggttccgccagtgaagccaatgttgaggaaaaggtgttggcatccaac
cccatcatggagtcaatcggaaatgctaagacaaccaggaatgataatagcagccgtttt
gggaagtacattgagattggttttgataagagacatcgaatcattggtgccaatatgaga
acttaccttttagagaaatccagagtggtgttccaggcagaagaggagagaaactatcat
atcttctatcagctttgtgcctcagcaaagttacctgaatttaaaatgctgcgattagga
gacgcaaataactttcattacacgaagcaaggtggcagtcctgtgattgaaggagtagat
gatgccaaggagatggcacaaaccaggcaggcctgcactttgctaggaattagtgaatct
tatcagatgggaattttccgaatacttgctggcatccttcacttaggcaatgttggattt
atgtctcgagattcagacagctgcacaatccctcccaggcatgaacctctcagcatcttc
tgtgacctcatggctgtggactttgaggagatgtgtcactggctctgccatcggaagctg
gctactgccgcggagacatacatcaagcccatctccaagctgcaggccacgaatgcccgc
gatgcgctggccaagcacatctatgccaagctctttaactggattgtagatcacgtcaat
caggttctccattctgctgtcaaacagcactcttttatcggcgtgctggacatttatgga
tttgaaacatttgagataaatagttttgaacagttctgcataaattatgcaaatgaaaaa
ctacagcagcaattcaatatgcatgtcttcaaattagaacaagaggaatatatgaaagaa
caaattccatggacactcatagatttttatgataatcagccttgcattaatcttatagaa
tctaaactgggcattctagatttgctggatgaggaatgcaggatgcctaaaggcacagat
gacacttgggcccaaaaattgtacaacacacatttgaacaaatgtgcgctctttgagaag
ccccgtctatcaaacaaagctttcatcatccagcattttgctgacaaagtggaataccag
tgtgaaggctttctggaaaagaataaagacactgtttttgaagaacaaattaaagttctt
aaatcaagcaagtttaagatgctaccagaattatttcaagatgacgagaaggccatcagt
ccaagttcagccacctcttcagggcgcacgctccttacccgcactcctgcaaagcccacc
aaaggcagaccaggccaggcggccaaagagcacaagaaaacggtggggcaccagttccga
aactcccttcacctgcttatggagaccctgaatgccactacccctcactacgtgcgctgt
attaagcctaacgacttcaagttcccattcacgtttgatgagaagagggcagtacagcag
ctgagagcgtgcggtgtcctggaaaccatccgaatcagcgcagcaggtttcccctctcgg
tggacttaccaagaatttttcagccgctaccgtgtcctaatgaagcaaaaagatgtgcta
agtgagagaaaacaaacatgcaagaatgttttagagaaactgataaaggacaaggacaaa
taccagtttgggaagacaaagatctttttccgtgccggtcaagtggcctatctggaaaaa
ttgagggcagacaaattgagggctgcctgcatccggatccagaagacgatccgagggtgg
ctgctgcggaagaagttcctgcgcatgcgcaaggctgccatcactgtgcagagatacgtg
cgaggccaccaggcccgatgttatgctaagttcctgcgcagaaccaaggcagcaaccatc
attcagaagtactggcgcatgtatgtaatccgccggaggtacaagatctggcggactgcc
acgatcgtccttcagtcttaccttcgaggctacttggccagaaataggtatcgcaagata
ctccgtgagcacaaagcagtcatcattcagaagtgggtccggggctggctggctcgcacc
tactacaagaggagtacgcacgccatcatctaccttcagtgctgcttccggcggatgatg
gccaagcgcgagctgaagaagctcaagatcgaggcccgctccgtggagcgctataagaag
ctccacattggcatggagaacaagatcatgcagctgcagcgcaaagttgacgaacagaac
aaagactacaaatgcctcatggagaaactgaccaatctggaaggaatatacaactctgag
accgagaaactacgaagtgacttagaacgtcttcaactaagtgaggaagaagctaagatt
gctactggacgtgtcctcagtctgcaggaagaaattgccaagctccggaaagacctggaa
caaactcagtgtgagaaaaaatccattgaagagtgtgctgatagatacaaacaggaaact
gagcagttggtatcaaatctgaaggaagaaaatactctgctgaagcaggaaaaagaggcc
ctcaatcaccttatcgtggagcaggctaaggagatgacagagacgatggaaaagaagtta
atagaagaaacaaaacaactggaactcgatcttaatgatgaaaggctgagatatcagaac
cttctgaatgagttcagtcgcttggaagaacgatatgatgacctcaaggaagagatgact
ttgatgattaatgtgcctaagcctggacacaagagaacagactccacccacagcagcaat
gagtctgaatacacctttagctctgaaattgcagaaactgaagacattccatcaaggaca
gaggagccaagcgagaagaaggtgcctctggacatgtcattgtttctcaagctccagaag
cgggtcacagagctggagcaggagaagcaggtgatgcaggatgagctggaccgcaaggag
gagcaggtgctccgaagtaaggcaaaggaagaagaaagaccacaaattagaggtgcagaa
ctggaatatgagtcactcaagcgtcaagaactagaatcagaaaacaaaaaactgaaaaat
gagctgaatgagttacgcaaggcccttagtgagaaaagtgcccccgaggtgaccgctcca
ggtgcaccagcctaccgtgtcctcatggagcagctgacctctgtgagtgaggagctcgat
gtccgcaaggaggaagtcctcatcttgaggtctcaactggtgagccagaaagaggccatc
caacccaagaatacaatgacagattccacaatacttttagaagatgtacaaaaaatgaaa
gataaaggtgaaatagcacaagcatatatcggtttgaaagaaacaaacaggctcctggaa
tcccagctgcagtcgcagaagaggagccatgagaatgaggccgaagccctccgcggggag
atccagagcctgaaggaggagaacaaccggcagcagcagctgctggcccagaacctgcag
ctgcccccagaggcccgcatcgaggccagcctgcagcacgagatcacccggctcaccaac
gagaacctggatttgatggaacaactcgaaaaacaagataagactgtccggaaactgaaa
aaacaactgaaagtatttgccaaaaaaattggtgaactagaagtgggccaaatggagaac
atatccccaggacagatcattgatgagcccattcgtccagtcaacattcccagaaaagaa
aaggatttccaaggaatgctggaatacaagaaggaggatgagcaaaaacttgttaagaac
ttgattctggaactgaagccacgtggtgtagcagtcaatttgattccagggttaccagcg
tatatcctgtttatgtgtgttcgacacgctgactacctgaatgatgatcagaaagtaagg
tcgttgctaacatcaacaataaacagcatcaaaaaagtattaaagaaaagaggtgatgat
tttgaaactgtctccttctggctttctaacacatgccgatttttgcactgtttgaagcag
tacagtggagaagagggctttatgaaacacaacacatctcgccagaatgaacactgcctc
accaattttgacctggccgaataccgacaggtgctaagtgacttggccattcagatctac
cagcagctcgtgcgggtgttagagaacatccttcagccaatgatcgtctccggaatgcta
gagcatgaaaccattcagggtgtgtctggggtgaagcccacagggctaagaaagcgaacc
tccagcattgctgatgagggtacctacacactggactccatcctgcggcagctcaactcc
ttccactcagtcatgtgtcagcacggcatggaccccgaactgatcaagcaggtggtcaag
cagatgttctacatcgtgggggccgtcacactgaacaacctcctcctccggaaggacatg
tgctcctggagtaaaggcatgcagatcaggtacaatgtcagtcaactagaagaatggctg
cgtgacaagaatctgatgaacagtggggctaaggaaaccctggaacctctcattcaggct
gctcagcttttgcaagtgaaaaagaaaacagatgatgatgcagaagccatttgttccatg
tgcaatgctttaactactgcccagattgtcaaagtgttgaatttgtatactccagttaac
gagtttgaagaaagagtctctgtgtcatttattcgtactatacagatgcgtttacgagac
aggaaagactctcctcagctgctcatggatgctaaacacatctttcctgtcacctttcct
tttaacccatcttcccttgcactagaaaccatccagattccagccagcctgggcctggga
ttcatatcacgggtctga
DBGET
integrated database retrieval system
