Globicephala melas (long-finned pilot whale): 115864855
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Entry
115864855 CDS
T11080
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmf03032
]
115864855 (PIF1)
03029 Mitochondrial biogenesis [BR:
gmf03029
]
115864855 (PIF1)
Enzymes [BR:
gmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
115864855 (PIF1)
DNA replication proteins [BR:
gmf03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
115864855 (PIF1)
Mitochondrial biogenesis [BR:
gmf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
115864855 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
PH_LRR1
AAA_19
Herpes_Helicase
AAA_22
UvrD_C_2
ABC_tran
RsgA_GTPase
AAA_7
AAA_16
Mg_chelatase
PhoH
AAA_24
T2SSE
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
115864855
NCBI-ProteinID:
XP_030734862
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All DBs
Position
2:69100130..69111756
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AA seq
641 aa
AA seq
DB search
MLSGTQAVAAECADAELRCRVAVEELSPGGQPRRRQALRTAELRLGRNERRELMLRLQAP
GPAGRPRCFPLRAARLFTRFAASGRSTLRLPADGAPRTGAVQLLLSDCPPDRLRRFLRTL
RLKLAAAPGPGPASARTQLLGPRPRDFVTISPVQPEELRRAAATWVTDSTPVKQPTESRS
GAKPSTEVPRWPLPVKKLSLPPTKPELSREQAAVLRVVLKGQSIFFTGSAGTGKSYLLKR
ILGSLPPTGTVATASTGVAACHIGGTTLHAFAGIGSGQAPLAQCVALAQRPGVRQGWLNC
QRLVIDEISMVEADLFDKLEAVARAVRQQNKPFGGIQLIICGDFLQLPPVTKGSQPPQFC
FQAKSWRRCVPVTLELTEVWRQTDKTFISLLQAVRLGRCSDEVTRQLRATAAHRVGRDGI
VATRLCTHQDDVALTNERQLQKLPGEVHSFEAMDSDPEQARTLDAQCPVSRLLQLKLGAQ
VMLVKNLAVSRGLVNGARGVVVGFEAEGRGLPQVRFLCGVTEVIRADRWMVQATGGRLLS
RQQLPLQLAWAISIHKSQGMSLDCVEISLGRVFASGQAYVALSRARSLQGLCVLDFDPMV
IRCDPRVLSFYATLRQDRGLSLESPDDDEAASDQENMDPNL
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcgggcacccaggcagtggcagcggaatgcgcggacgcggagctgcggtgccgt
gttgctgtggaggagttgagcccgggcgggcagccgcgaaggcgccaggccctgcgcacc
gcggagctgagactgggtcgtaacgagcgccgcgagttgatgctgaggctgcaggcgccc
gggcccgcggggcggccgcggtgctttcccctgcgcgccgcgcgcctcttcacgcgcttc
gccgcgtccgggcgcagcactctgcggcttcccgccgacggcgctccccggaccggcgcg
gtgcagctgctgctctccgactgcccccctgaccgcctgcgccgcttcctgcgcactctg
cgcctcaagctggccgcggccccgggtcccgggccggcctccgcccgcacgcagctgctt
ggcccgcggccccgcgacttcgtcaccatcagcccggtgcagcccgaggaacttcggcgc
gcggcggccacctgggtcacggactccacgccggtgaagcagcccacggagtcccggtcc
ggggccaagcccagcaccgaagtcccaaggtggcccctgcctgtgaagaagctgagcttg
ccccccaccaaaccagagctttccagggaacaggctgctgtgctgagggttgtcctgaaa
ggccagagcattttcttcactgggagtgcagggacggggaagtcttatctgctgaagcgt
atcctgggctcactgcctcccacaggcactgtggccactgccagcactggggtggcagcc
tgccacatcgggggtactaccctccatgcctttgcaggcattggctcgggtcaggctccc
ctggcccagtgtgtggccctggcccagcggccaggcgtgcggcagggctggctgaactgc
cagcggctagtcattgatgagatctccatggtggaagcggacctatttgataagctggag
gccgtggccagagctgtccggcagcagaacaagccatttggagggatccagctcatcatc
tgtggggacttcctgcagctgccgcctgtaacaaagggatcccagcccccgcagttctgc
ttccaggccaagagctggaggagatgtgtcccagtgaccctggagctgactgaggtgtgg
aggcagacagacaagaccttcatctctctgctgcaagctgtgcggctgggcaggtgctca
gatgaggtcacccgccagctccgggccacggctgcccacagggtggggcgagatgggatt
gtggccacgaggctctgcacccaccaggatgatgtggcccttaccaacgagaggcagctg
cagaaactaccaggtgaggtacacagctttgaggccatggacagtgaccctgagcaagcc
cggaccctggatgcccaatgtcccgttagccggctccttcagctaaagctgggggctcag
gtgatgctggtgaagaacttggcagtgtctcggggcctggtaaatggtgcccgaggggta
gtagttgggtttgaagccgaggggagagggctgccccaggtgcggttcctgtgtggagtc
accgaggtcatccgtgcagaccgctggatggtgcaggccactgggggccggcttctcagc
cggcagcagctgcccctccagctggcctgggccatatccatccacaagagccagggcatg
tccctggattgcgtggagatctctctgggccgtgtgtttgccagcggccaggcctatgtg
gccctttcccgggcccgcagcctgcagggcctatgtgtgttggactttgaccctatggtg
attcgctgtgacccccgtgtgctgagcttctatgctaccctgcggcaggacaggggcctc
agcctggagtccccagatgacgatgaggcagcctcagaccaggagaacatggacccgaac
ctttga
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