Globicephala melas (long-finned pilot whale): 115865054
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Entry
115865054 CDS
T11080
Symbol
SEMA6B
Name
(RefSeq) semaphorin-6B isoform X1
KO
K06842
semaphorin 6
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
115865054 (SEMA6B)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
LapA_dom
Motif
Other DBs
NCBI-GeneID:
115865054
NCBI-ProteinID:
XP_060153297
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Position
3:167835994..167862971
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AA seq
885 aa
AA seq
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MRTPRAPPPRPALLLLLLLLGGSHGLFPEEPPPLSVAPRDYLNHYPVFVGSGPGHLTPAE
GTDDLNIQRVLRVNRTLFIGDRDNLYRVELEPPTSMELRYQRLSVSQKLTWRSNPSDINV
CRMKGKQEGECRNFVKVLLLRDESTLFVCGSNAFNPVCANYSMDTLQPLGDNISGMARCP
YDPKHANVALFSEGMLFTATVTDFLAIDAVIYRSLGDRPTLRTVKHDSKWFKEPYFVHVV
EWGSHIYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLKARLNCSVP
GDSHFYFNVLRAVTGVVSLGGRPVVLAVFSTPSNSIPGSAVCAFDMTQVAAVFEGRFREQ
KSPESIWTPVPEDQVPRPRPGCCAAPGMQYNASSAFPDEILNFVKTHPLMDEAVPSLGHA
PWIVRTLMRYQLTRVAVDVGAGPWGNQTVVFLGSEAGTVLKFLVWPNASASGTTGPSVFL
EEFETYRPDRCGRSGGGETGQRLLSLELDAASGGLLAAFPRCVVRVPVARCQQYSGCMKN
CIGSQDPYCGWAPDGSCIFLSPGTRANFEQDVSGASTSGLGDCTGLLGASLSEERAGLVS
VNLLVTSSVAAFVVGAVVSGFSVGWYVGLRERRELARRKDKEAILAHGGGEAVLSVSRLG
ERRAGGPGGRAGGGGGPGVPPEALLAPLMQNGWAKATLLQGGSHDLDSGLLPTPEQTPLP
QKRLPTPHPHALGPRAWEHGHTLLTASLSSSLLLLAPARAPEPPPAPGEPAPDARLFVAR
PGRASHGDFPLTPHASPDRRRVVSAPTGPSDPSSAADGLPRPWSPPPTGSLRRPGAHAPP
AAALRRTHTINSGEARPRGRHARPGTDLAHLLSYGGPDRTAPPVP
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgcggaccccgcgagcgccccctccccgcccggccctactgctcctgctgctgctactg
ggaggctcccacggcctcttccccgaggagccgccgccactcagcgtggcccccagagac
tacctgaaccactatcccgtgttcgtgggcagcgggccaggacacctgacccccgcagag
ggcaccgacgatctcaacatccagcgggttctgcgggtcaacaggacgctcttcatcggg
gacagggacaacctgtaccgggtggagctggagccccccacgtccatggagctgcggtac
cagcggctctctgtgtcccagaagctgacctggcgctccaaccccagcgacatcaacgtg
tgtcggatgaagggcaagcaggagggcgagtgtcgaaattttgtaaaggtgcttctactt
cgggacgaatccaccctcttcgtgtgtggttccaatgccttcaaccccgtgtgtgccaac
tacagcatggacacactgcagcccctcggggacaacatcagtggcatggcccgctgccca
tacgaccccaaacacgccaatgttgccctcttctctgaagggatgctcttcacagccacc
gttaccgacttcctagccatcgacgctgtcatctaccgcagcctcggggaccggcccact
ctgcgcaccgtgaaacacgactccaagtggttcaaagagccctactttgtccacgtggtg
gagtggggcagccacatctactttttcttccgggagatcgcaatggagtttaactacctg
gaaaaggtggtggtgtcccgtgtggcccgggtgtgcaagaatgacgtgggcggctcccct
cgcgtgctggagaagcagtggacgtcgttcctgaaggcacggctcaactgctcggtgcca
ggggactcccacttctacttcaacgtgctgcgggccgtcacgggcgtggtcagcctgggg
ggccggcccgtggtccttgctgttttctccacgcccagcaacagcatccccggctcggcc
gtctgcgcctttgacatgacacaggtggctgccgtatttgagggccgcttccgtgagcag
aagtcccctgagtccatctggacacccgtgccggaggaccaggtgccacggccccggccc
gggtgctgtgcagctcccggcatgcagtacaacgcctccagcgccttcccggacgagatc
ctcaacttcgtcaagacacaccccctgatggacgaggcagtgccctcactgggccacgca
ccatggattgttcggactctgatgcggtaccagctgacgcgagtggccgtggacgtgggc
gccggcccctggggcaaccagactgtcgtcttcctgggttctgaggcgggcactgtcctc
aagttccttgtctggcccaacgccagtgcctcgggcaccaccgggcccagtgtcttcctg
gaggagtttgagacttaccggccggacaggtgtggacgctctgggggtggcgagacaggg
cagcggctgctgagcctggagctggatgcggcctcgggtggcctgctggcggccttcccc
cgctgtgtggtccgagtgcctgtggcgcgctgccagcaatactcaggatgcatgaagaac
tgtattggcagtcaggacccctactgcggctgggccccggatggctcctgcatcttcctc
agccccggcaccagagccaactttgagcaagacgtgtccggggccagcacctcaggctta
ggggactgcacaggactcctgggggccagcctctcggaggagcgcgccgggttggtgtcg
gtgaacctgctggtgacgtcgtcggtggcggccttcgtggtgggcgccgtggtgtccggc
ttcagcgtgggctggtacgtggggctccgcgagcggcgcgagctggcccgccgcaaggac
aaggaggccatcctggcgcacgggggcggcgaggccgtgctgagcgtgagccgcctgggc
gagcgccgggcgggcggccccgggggccgggccgggggcggcggcgggcccggggttccc
cccgaggccctgctggcgcccctgatgcagaacgggtgggccaaggccacgctgctgcag
ggcggctcccacgacctggactcggggctgctgcccacgcccgagcagacgccgctgccc
cagaagcgcctgcccaccccgcacccgcacgccctgggcccccgcgcctgggagcacggc
catacgctgctcacggcctccctctcatcctccctcctgctgctggcccctgcccgcgcc
cccgagccgccccccgcgcccggcgagccggcccccgacgcccgcctcttcgtcgcgcgg
cccggccgcgcctcccacggcgacttcccgctcaccccccacgccagcccggaccgccgg
cgggtggtgtcggcgcccacgggcccctcggacccgagctccgccgccgacggcctccct
cggccctggagcccaccgcccaccggcagcctccggaggccgggcgcgcacgccccgccc
gccgccgcgctgcgccgcacgcacacgatcaacagcggcgaggcccggccccgcggccgc
cacgcccggcccggcacggacttggcccacctcctctcgtacgggggcccggacaggact
gcgccccccgtgccctag
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