Globicephala melas (long-finned pilot whale): 115865195
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Entry
115865195 CDS
T11080
Symbol
ATG4D
Name
(RefSeq) cysteine protease ATG4D isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04136
Autophagy - other
gmf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115865195 (ATG4D)
04136 Autophagy - other
115865195 (ATG4D)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gmf01002
]
115865195 (ATG4D)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmf04131
]
115865195 (ATG4D)
03029 Mitochondrial biogenesis [BR:
gmf03029
]
115865195 (ATG4D)
Peptidases and inhibitors [BR:
gmf01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
115865195 (ATG4D)
Membrane trafficking [BR:
gmf04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
115865195 (ATG4D)
Mitochondrial biogenesis [BR:
gmf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
115865195 (ATG4D)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
115865195
NCBI-ProteinID:
XP_030735536
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All DBs
Position
3:complement(164133346..164139571)
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AA seq
473 aa
AA seq
DB search
MNSVSPAAAQYRSGSQEDARSPEGRRPRRPRTPDPNGLGPPGASGPALASSGTGPGEPDE
VDKFKAKFLTAWNNVKYGWAVKSRTSFSKISSVHLCGRRYRFEGEGDIQRFQRDFLSRLW
FTYRRDFPPLAGGCLTSDCGWGCMLRSGQMMLAQGLLLHFLPRDWTWSLGAGLGPPEPSR
LASPNRYRGPAHWMPPRWAQAAPEPEQERRHRQIVSWFADHPRAPFGLHRLVELGQSSGK
KAGDWYGPSLVAHILRKAVESCSEVTRLVVYVSQDCTVYKADVARLVARPDPTAEWKSVV
ILVPVRLGGETLNPVYVPCMKELLRSELCLGIMGGKPRHSLYFIGYQDDFLLYLDPHYCQ
PTVDVSQADFPLESFHCTSPRKMAFAKMDPSCTVGFYAGDRKEFETLCSELTRVLSSSSA
TERYPMFTLVEGHAQDHSLDDLCSQPSQPTLRLPRTGRLLKAKRPSSDDFVFL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgtgtcgccggccgcagctcagtaccggagcggcagccaggaggacgcgcgc
agccccgagggccgcaggccacggcgcccccgaaccccggaccccaacggcctggggccc
cccggagccagcggccccgctcttgcgtcgtccgggaccggcccgggggagccggacgaa
gtggacaagtttaaagcgaagttcctgacagcctggaacaacgtcaagtacggttgggca
gtcaaaagccggaccagctttagcaagatctctagcgtccatctctgtggccgccgctac
cgcttcgagggcgagggtgacatccagcgtttccagcgggactttttatctcgcctatgg
tttacttaccgccgggacttcccacctctcgccgggggctgcctgacctccgactgtggc
tggggatgcatgttacggagtgggcagatgatgctagctcaggggctgctgctgcacttc
ctgcccagagattggacgtggtccctgggcgcgggcctgggtccccctgagccatcgagg
ttggcctctcccaaccggtaccgtgggcctgcccactggatgcctccgcgctgggcccag
gctgcccctgagccggagcaggagcgccggcaccggcagattgtatcctggttcgctgac
catccccgggcccccttcggcctacaccggctggtggagcttgggcagagctcgggcaag
aaggcgggtgactggtatgggccgtccctggtggcgcacatactcaggaaagctgtggag
agctgctcagaggtcacccgcctggtggtgtacgtttctcaggactgcacagtgtacaag
gcggatgtggcacgcctggtggccaggccagaccccacagctgagtggaaatccgtggtc
atcctggtgccagtgcggctgggtggtgagactctcaaccccgtgtacgtgccctgcatg
aaggagctcctgcgttcagagctgtgccttggcatcatggggggcaagccacgccactcg
ctgtacttcattggctatcaggatgacttcctcctctacctggaccctcactactgccag
cccactgtggatgtcagccaggctgacttccccctagagtccttccattgcacctcaccc
cgcaagatggcctttgccaagatggacccgagctgtactgtggggttctatgctggagac
aggaaggagtttgagacgctctgctcagagctgaccagggtcctcagctcctcctcagcc
acagagcgataccccatgttcaccctggttgagggccatgctcaggaccacagcctggac
gacctctgctcccagccctcccaacccacactgcggctccctcgcacaggccggctcctc
aaggcgaaacgcccaagctctgacgactttgtgtttttataa
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