Globicephala melas (long-finned pilot whale): 115865344
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Entry
115865344 CDS
T11080
Symbol
DDX49
Name
(RefSeq) probable ATP-dependent RNA helicase DDX49
KO
K14778
ATP-dependent RNA helicase DDX49/DBP8 [EC:
5.6.2.7
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gmf03009
]
115865344 (DDX49)
Enzymes [BR:
gmf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115865344 (DDX49)
Ribosome biogenesis [BR:
gmf03009
]
Eukaryotic type
90S particles
Helicases
115865344 (DDX49)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-GeneID:
115865344
NCBI-ProteinID:
XP_030735897
LinkDB
All DBs
Position
3:160191468..160198498
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AA seq
483 aa
AA seq
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MAGFAELGLSSWLLEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPI
LQKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELSRK
PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLETILAAVPARR
QTLLFSATLTDTLRELQGLATNQPFFWEAQAPVRTVEQLDQRYLLVPEKVKDAYLVHLIQ
NFQDEHEDWSIIIFTNTCKTCQILCMMLRKFNFPTVALHSMMKQKERFAALSKFKSSIYR
ILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQYDIHLV
HAIEEQIKKKLEEFSVEEPEVLQILTQVNVVRRECEIKLEAANFDEKKEINKRKQMILEG
KDPDLEAKRKAELAKIKQKNRRFKEKVEQALQRQKASGAGRRGCPSRAQPEACLSPAPAQ
GPA
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggctggctttgcggagcttgggctgtcatcctggctcttggaacaatgtcggcagctg
ggtttgaagcagcccacgcccgtgcagcttggctgcattcccgccatcctggaaggtcgg
gactgcctgggctgtgccaagacaggcagtggcaagacggcagcgtttgtcctgcccatc
ttgcagaagctgtctgaggatccctatggcatcttctgcctcgtcctgacacccaccagg
gagctggcctaccagatcgcagagcagttccgggtcctggggaagcctctgggcttgaaa
gactgcatcattgtcggcggcatggacatggtggcccaggccttggagctctcccggaaa
ccacatgtggtcatcgccacaccagggcgcctggctgaccacctccgcagctccaatacc
ttcagcataaagaagattcgcttcctggtgatggatgaggcggaccggctgttggagcag
ggctgcactgacttcaccgtggacctggagaccatcctggcggctgtgccggcccgcagg
cagacgctgctcttcagtgccacgctgaccgacacgctgagagagctgcagggcctggcc
accaaccagcccttcttctgggaggctcaggcccctgtgcgcacagtagaacagctggac
cagcgctacctgctagtgcctgagaaggtcaaggatgcctacctggtccacctgatccag
aacttccaggacgagcacgaggactggtccatcatcatcttcaccaacacatgcaagacc
tgtcagattctgtgtatgatgctgcgcaaattcaacttccccaccgtggctttgcattcc
atgatgaaacagaaagaacgctttgccgccctgtccaagttcaagtccagcatctaccgg
atcctgatcgcgacagatgtggcctcccggggcctggacattcccacggtacaggtggtc
atcaaccacaacacccccgggctcccgaagatctacatccaccgagtcggccggacagcc
cgtgcagggcggcagggacaggccatcacgctggtgacgcagtatgacatccacctggta
cacgccatcgaggagcagatcaagaagaagctggaggagttctcggtggaggaacctgag
gtgctacagatcctcacacaggtcaacgtggtgcggagggagtgtgagattaaactggag
gcagccaactttgatgaaaagaaagagattaataagcggaagcagatgatcctggagggg
aaggatcccgacctggaggccaagcgcaaggccgagctggccaaaatcaagcagaagaac
cggcgcttcaaggagaaagtggagcaggcactgcagcggcagaaagccagcggggctggc
cgcagggggtgtccatccagggcccagcctgaggcctgcttgtccccagcacccgctcag
ggcccggcctga
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