KEGG   Globicephala melas (long-finned pilot whale): 115865424
Entry
115865424         CDS       T11080                                 
Symbol
NWD1
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT domain- and WD repeat-containing protein 1
  KO
K24734  NACHT domain- and WD repeat-containing protein
Organism
gmf  Globicephala melas (long-finned pilot whale)
Brite
KEGG Orthology (KO) [BR:gmf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:gmf04990]
    115865424 (NWD1)
Domain-containing proteins not elsewhere classified [BR:gmf04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   115865424 (NWD1)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WHD_NWD1 WD40 NACHT Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_1st WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_EML_2 Beta-prop_WDR3_2nd EIF3I NPHP3_N Beta-prop_EML Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd WD40_Gbeta AAA_16 ANAPC4_WD40 AAA_22 Beta-prop_Aladin ATPase_2 AAA Beta-prop_NWD2_C Beta-prop_RIG_2nd AAA_5 RuvB_N RNA_helicase NB-ARC Beta-prop_ELP1_1st TniB Beta-prop_EMC1_N nSTAND3
Other DBs
NCBI-GeneID: 115865424
NCBI-ProteinID: XP_030736084
LinkDB
Position
3:158488658..158557101
AA seq 1242 aa
MDGKMWMQRGKPYRAPPTXVVQTFCQKHGLMSEVVDLRWGIRNTEATNHMTTELCLEELG
WCQKTSIGPAFVALVGDQYGPRPIPSLIKEKEWGALKAQLSARPRDLELVARRFRTEKNA
VPPTHLLQTLGSGEARGPEEATLISALRSGAQEAGRLGLVTQEKWHRYHRSAIEGEIERD
LLNAIDWDQGATVFLRDIQDLNKHILEVCALKIVEQLAAGCPDTDAQNLLSSLKERIADV
QPGVLKAHHLAWSRDLVDPPNKAHGRYPKELGEQFVARANHQVPECLQKLETGRQELAWL
YQEIRHHLGLSAEAPQTFCGHQELLTQLGQRLQQSDGHPHPPLVLFGPPGIGKTALMCKL
AEQMPGLLGHKTVTVLWLLGTSQMSSDARGLLQSICFQVCLAYGLPLPPAQVLEAHTRVV
QFFHTLLHTISCRNFESLVILLDSVDEVASVHRARRVLWLPPKCPSRGHLILSVCSGQRG
VLDTMRQVLTDPGAYWEVKPLSGNKGQEMLQLLLAAWRRTLSLMQRDLLWTSLPECGHPG
RLRLAFEEARKWASFTMPAPLASTAKEAMHQLCAHLEQTRGQLLVAXVLGYTLCSRHGLS
EAEMKDVLSLDDEVLQAVYQDWTPPSKELLRFPPLLWVKLRRDLGNCLARRPVDGFILLA
IAHRQLAEVVRERFLSWPEKAKGHGVLADLFSGTWSQGTKKLITLPLVGKPLNLDHKVAP
QPLWFSDTVANLRKLKELPYHLIHSGRIEELKQEVLGSMNWISCRGISGGIEGLLDDFDL
CAPHVDCPEVSLVREAPQLCRPAVELRGMERSILCTELLASLHFFATSHPALVGQLCHQA
QSWFRMCPHPVLVPLGGFLQPPGGPLQATLTGCHKGITAMAWSLEEKLLVVGTQESMVAV
WDMEEQQVIHILAGHTGGVRCVKVFAKGSLAISTLKDHTLCLXNLLSNQEKFTIXDGGSE
GPTEPQISSLHVDEAKKVVHSASSSKINAWNLETEELIFHILGDASDPWVCTAVLASKAT
LLTVLQGDVVSLWSSATGTLQRKQHLSSIKEETITYGVSVQKQRKTVTRSSKGSISLVSS
EGDSLLEKLPEAVGFLVVSEDESLLAQSSYCRGVQCACFSKDDKYVYAGLKDRSIIVWSV
LDGTLLAIQFVHAVVNRIIPTSNGFIAPTTHGYLNCERFQCPSSRISQQDSLKNFKKAVX
MVKSRQREELIAAAGALQDSRSGSAQGNESKSNKCSQVCLLV
NT seq 3729 nt   +upstreamnt  +downstreamnt
atggatggcaagatgtggatgcagagagggaagccctacagagcaccgcctaccnccgta
gtacagaccttctgccagaagcacggcctgatgtccgaggtggttgatctgaggtggggt
attcggaacacagaggccaccaaccacatgaccacggaactctgcttggaggagcttggc
tggtgtcagaaaacatccatagggccagcttttgttgccctcgtgggtgaccagtacggc
ccccgtcccatcccctcgctgatcaaggaaaaggagtggggggcgctgaaagctcagctg
agcgccaggccacgtgacctggagctggtggcacgacgcttccggacagaaaagaacgcc
gttccccccacccacctgctgcagaccctgggcagcggggaggcccgtgggcccgaggag
gccaccctgatctctgcattgcgctctggagcccaggaggccggcaggttgggcctcgtc
acccaggagaagtggcaccgctaccaccggtcagccatcgagggggaaatagaacgggac
ctgctgaacgcaatagactgggaccagggggcgaccgtcttcctgagagatatccaagac
ctcaacaaacacatcctggaggtctgtgccctcaagatagtggagcagcttgcagccggc
tgcccggacacagatgcccagaaccttctcagcagcctcaaggagcgcatcgctgacgtg
cagcccggagttctcaaggcccaccacctggcatggagccgagacctggtggacccccca
aacaaggctcatggacggtacccaaaggagctgggggagcagtttgtggccagggctaac
catcaggtccccgagtgcctccagaaactggagacaggcaggcaggagttggcttggctc
tatcaggagatccgccaccacctggggctcagtgccgaggccccccagaccttctgtggg
caccaggagctcctaacccagctgggacagcggctccagcagagcgacggccacccccac
ccacccctggtgctttttggacccccgggcatcggaaagactgctctgatgtgcaagctg
gctgagcaaatgccagggctgcttggccacaagacagtgaccgttctatggttgctgggg
acgtcacagatgagctccgacgcccgaggcctgctccagagcatctgcttccaggtgtgc
ctggcctatgggctacccctgccccctgcccaggtcttggaggcccataccagggtggta
cagtttttccacaccctcctccacaccatctcctgccgaaactttgagtcccttgtgatc
ctgctggattcggtggatgaggtagcctctgtccaccgtgctcggagggtcctctggctg
cctcccaagtgcccctcaaggggccacctcatcctctcagtctgctcaggacagcggggc
gttttagacactatgcggcaggtgctcacggacccaggtgcttactgggaggtgaaaccc
ctctctggaaacaaagggcaagagatgcttcagctcctgctggccgcctggaggaggacg
ctgagcctgatgcagagggacctgctctggaccagcctcccagagtgcgggcacccaggg
cggctgaggctggccttcgaggaggcccggaaatgggcctccttcaccatgccggcccct
ctggcctccactgctaaggaggcgatgcaccagctgtgtgcccacctggagcagacacgt
gggcagctcctggtggcctgagtgctgggctatacattgtgttccaggcatgggctctcg
gaggcagagatgaaggatgtcctgtccttggatgacgaggtcctgcaggctgtgtaccaa
gactggaccccgcccagcaaagagctgctgcgtttcccacccctgctgtgggtgaagctt
cgtcgagatctgggtaactgcttggccaggcggcccgtggatggcttcatactcctggcc
atcgcccacagacagctggccgaggtggtccgagagcgcttcctgtcatggcccgagaaa
gccaagggtcacggagtcttggccgacttattctcagggacctggagccagggaaccaag
aaactcatcacgctgccacttgtggggaaacccctgaacctggaccacaaggtggcccct
cagcccctgtggttctcagacacggttgcaaacctgcggaagctgaaggagttaccctac
cacctgatccactcaggccgcatcgaggagctgaagcaggaggtgctgggcagcatgaac
tggatttcctgccggggcatctcggggggcattgagggtctgttggatgactttgacctg
tgcgcccctcacgtggactgtcctgaggtcagcctggtccgggaagccccccagctgtgc
cgcccggcagtggagctccgaggcatggagagaagcatcctgtgtacagaactcctggcc
agcctccatttcttcgccacctcacatccggcgctggtgggacagctgtgccaccaggcg
cagagctggttccggatgtgcccacaccctgtgctggtgcccctcggaggattcctccag
cccccgggaggacccctccaggcaaccctcaccggctgtcacaaaggcatcactgccatg
gcatggagcctggaagagaagctgctggtggttggcacccaggagagcatggtagctgtg
tgggatatggaagaacagcaggtgatccacatcctagctggacacacaggaggggtgagg
tgtgtgaaagtgtttgccaaaggatcgcttgccatctctaccttgaaggatcacaccctg
tgcttgtgaaacttactctctaaccaggagaaattcaccatttgagatggaggctcagaa
ggtcccactgaacctcagatctcgagccttcatgtggatgaagcaaagaaggttgtgcat
tcagcatctagctcaaagatcaatgcttggaatctggaaactgaagagctgattttccat
atcctgggggatgcctctgacccctgggtgtgcacggcagtgctggcttccaaggccacg
ttgctgacggtgttgcagggtgacgtggtcagtctgtggagttcagccacaggaacactg
caaaggaagcaacatttgtccagcatcaaagaagaaacaataacctatggggtctcagtc
cagaaacaaagaaagacggtgaccaggtccagcaagggctccatctctttggtttcctcc
gaaggagacagcctgctggagaagcttccagaagccgtggggttcctggtggtctctgaa
gatgagtcccttctcgctcagagttcttactgtagaggtgtccaatgtgcttgcttctcc
aaggatgacaagtacgtctacgcaggcttgaaagatcgctccataatcgtctggagtgtg
ctggatggcacactgctggccatccagtttgtccatgccgtggtgaacagaatcatccca
acctccaatggcttcattgcccccaccacacatggctatctcaactgtgaacgtttccag
tgcccttcatcaagaatctcacaacaggactctctcaaaaacttcaaaaaagcagtgtag
atggtcaaatccaggcagagagaagagctgattgctgctgcaggagcactccaggactca
agatcagggagtgcccagggaaacgaatctaaatcaaacaaatgctcacaagtctgcctg
ctagtgtaa

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