Globicephala melas (long-finned pilot whale): 115865527
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Entry
115865527 CDS
T11080
Symbol
SLC1A6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04082
Neuroactive ligand signaling
gmf04721
Synaptic vesicle cycle
gmf04724
Glutamatergic synapse
gmf05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
115865527 (SLC1A6)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
115865527 (SLC1A6)
04721 Synaptic vesicle cycle
115865527 (SLC1A6)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
115865527 (SLC1A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gmf02000
]
115865527 (SLC1A6)
Transporters [BR:
gmf02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
115865527 (SLC1A6)
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Gene cluster
GFIT
Motif
Pfam:
SDF
DUF7844
Motif
Other DBs
NCBI-GeneID:
115865527
NCBI-ProteinID:
XP_030736274
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Position
3:complement(157393928..157414114)
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AA seq
564 aa
AA seq
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MSSHGNSLFLRESGQRLGRVGLLQRLLDSLQQRALRTRLRLQTMTREHVLRFLRRNAFIL
LTVSAVVIGVSLAFALRPYQLSYRQVKYFSFPGELLMRMLQMLVLPLIVSSLVTGMASLD
NKATGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSKEGLHREGRIETVPTADAFMD
LVRNMFPPNLVEACFKQFKTQYSTRLVTRTIVRTDNGSELGTSMPPLSSMENGSSLLENV
TRAIGTLQEVLSFEETVPVPGSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFDSLN
EAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGGILPL
IYFLITHRNPFPFIGGILQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGA
TVNMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASIGAAGIPQAGLVTMVIVL
TSVGLPTEDITLIIAVDWFLDRLRTVTNVLGDSIGAAVIEHLSQRELELQEAELTLPSLG
KPYKSLMAQEKGASRGRGGNESAM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccatggcaacagcttgtttctgcgggagagtggccagcggctgggccgggtg
ggcttgctgcagcggctgctggacagcctgcagcagagagcgctgagaacgcgcttgcgc
ctgcagaccatgacgcgcgagcacgtgctgcgcttcctgcgccggaacgccttcatctta
ctgaccgtcagcgccgtggtcattggggtcagcctggcctttgccctgcgcccgtaccag
ctcagctatcgccaggtcaagtacttctctttccctggagagcttctcatgaggatgctg
cagatgctggtgctgccactcattgtctccagtctggtcacaggtatggcgtccttggat
aacaaggcaacagggcggatggggatgcgggcagctgtatactacatggtgaccactgtc
atcgcggtcttcatcggcatcctcatggtcaccatcatccatcctgggaagggctccaag
gaggggctgcaccgagagggccggatcgagaccgttcccacggctgatgccttcatggac
ctggtcagaaatatgtttccgcccaaccttgtggaggcctgcttcaaacagtttaagacg
cagtacagcacgaggttggtaaccaggaccattgtgaggacagataatggatctgagctg
ggcacctccatgcctcctttatcctcaatggagaacggaagcagcctcttggaaaatgtc
acacgggccataggcaccttgcaggaggtgctgagctttgaggagactgtgcctgtgcct
ggctcagccaatggcatcaacgccctgggccttgtggtcttctcagtggcctttgggctg
gtcatcggtggcatgaaacacaagggccgagtcctgcgggatttcttcgacagcctcaat
gaggctattatgaggctggtgggcatcattatctggtatgcacctgtgggcatcctgttc
ctgattgctggcaagatcctagagatggaagacatggccgtccttgggggtcagctgggc
atgtacaccctgaccgtcatcgtgggtttgttccttcatgccggtggcatcctgcctctc
atctacttcctcatcacccatcggaatcctttccccttcattgggggaatactgcaggcc
ctcatcactgccatgggcacgtcttccagctctgcgacactgcccatcaccttccgctgt
ctggaggagggtctgggtgtggaccgccgcatcaccaggtttgtgctgcctgtgggggcc
accgtcaacatggatggcactgccctctatgaggccctggccgccatcttcatcgctcaa
gtcaacaactacgaactcaacctgggtcagatcacaactatcagtatcacggctacagca
gccagcattggggctgctggcatcccccaggcaggtctggtcaccatggtcattgtgctc
acctcggtcggcctgcccactgaagacatcacgctcatcatagctgtggactggttcctt
gatcgacttcgcaccgtgaccaatgtgctgggggactctattggagcagcagtcattgag
catttgtctcagcgggagctggagctgcaggaagctgaactcaccctccccagcctgggg
aagccctacaagtctctcatggcacaagagaagggggcgtccaggggacggggaggcaac
gagagtgccatgtga
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