Globicephala melas (long-finned pilot whale): 115865634
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Entry
115865634 CDS
T11080
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115865634 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115865634 (FIP1L1)
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
115865634 (FIP1L1)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
115865634
NCBI-ProteinID:
XP_030736399
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Position
5:72781519..72850152
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AA seq
604 aa
AA seq
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MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANP
PSGIEDETPENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTVGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYG
FNEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQG
RTGNSEKETALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASKKANSSVGKWQDQY
GRAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPF
FPPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIES
GHSSGYDSRSARAFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYSRREKDRDRDRDRDRE
RDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRE
RRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEA
TPAE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgctaaccct
ccatcgggaattgaagatgaaactcctgaaaatggcgtacctaaaccgaaagtgacagag
actgaagacgatagtgatagcgacagtgatgatgatgaggatgatgttcatgtcactata
ggagacattaaaacgggagcaccacagtatgggagttatggtacagcacctgtaaatctt
aacatcaagacaggaggaagagtttatggaactacagtaggaacgaaagtcaaaggagta
gatcttgatgcacctggaagcattaatggagtgcccctgttggaggtagatttggattct
tttgaagataaaccatggcgtaaacctggtgctgatctttctgattattttaattatggt
tttaatgaagatacctggaaagcttactgtgaaaaacaaaagaggatacgaatgggactg
gaagttataccagttacctctactacaaataaaattacggccgaagactgtactatggaa
gttacaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcaggga
agaactggaaattcagagaaggaaacagcgcttccatctacaaaagctgagtttacttct
cctccttctttgttcaagactggactcccaccaagcagaaacagcacctcttctcagtct
cagacaagtactgcctccaaaaaagccaattcaagcgttgggaagtggcaggatcaatat
gggagggccgaatcacctgatctaaggagattacctggggcaattgatgttattggtcag
actataactatcagccgagtagaaggaaggcgacgggcaaatgaaaacagcaacatacag
gtcctttctgaaagatctgctactgaagtagacaacaattttagcaaaccaccgccattt
ttccctccaggagctcctcccactcaccttccacctcctccatttcttccacctcctccc
actgtcagcactgctccacctctgattccaccaccaggtattccaataactgtaccacct
ccaggttttcctcctccaccaggcgctccacctccgtctcttataccaacaatagaaagt
ggacattcctctggttatgatagtcgttctgcacgtgcttttccatatggcaatgttgcc
tttccccaccttcctggttctgctccttcatggcctagtcttgtggacaccagtaagcaa
tgggactattactcaagaagagagaaagaccgagatagagacagagacagagaccgagaa
cgagatcgtgatcgagacagagaaagagaacgcaccagagagagagagagggagcgtgat
catagtcccacgccgagtgttttcaacagtgatgaagaacgatacagatacagggagtat
gcagaaagaggctatgagcgccacagagcaagtcgggagaaagaagaacgacacagagaa
agacgacacagagagaaagaggaaaccagacacaagtcctctcgaagtaatagtagacgt
cgccatgaaagtgaagaaggagacagtcataggagacacaagcacaaaaaatctaaaaga
agcaaagaaggaaaagaagctggcagcgagcctgcccctgaacaggagagcaccgaagct
acacctgcagaatag
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