Globicephala melas (long-finned pilot whale): 115865742
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Entry
115865742 CDS
T11080
Name
(RefSeq) LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein A3-like
KO
K12741
heterogeneous nuclear ribonucleoprotein A1/A3
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03040
Spliceosome
gmf05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115865742
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
115865742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmf03019
]
115865742
03041 Spliceosome [BR:
gmf03041
]
115865742
Messenger RNA biogenesis [BR:
gmf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
115865742
mRNA cycle factors
Common to processing body (P body) and stress granule
115865742
Spliceosome [BR:
gmf03041
]
Common components
Common spliceosomal components
hnRNP proteins
115865742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
115865742
NCBI-ProteinID:
XP_060154760
LinkDB
All DBs
Position
5:complement(85062641..85064751)
Genome browser
AA seq
377 aa
AA seq
DB search
MEVKPPPGCPQPDSSCRCHHWGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREYFEKWGT
LTDCVVMRDPQTKRSRGFGFVTYACVEEVDAAMCAQPHKVDGXVVEPKRVVSRDDSIKPG
AHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIVIEDRHSGKKRGFSFVTFDDHDTVD
KIVIHKYHTIIGHNCEVKKALSKQEMQSAASQRGRGGVSGNFMGHGRNFGGGGGNFGRGG
NFGGRGGYGHGGGGSRDSYGGGDGGYNGFGGDGGNYGGGPGYSSRGGYGGGGRGYGSQGG
GYGGGGGGYDGYNEGGNFGGNCGGGRSYNDFGNYSGQQQSNYGPMKGGSFGGRSSASPYG
GGYGSGGGSGGCGSRRF
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggaggtaaaaccgccacccggctgcccccagcccgactccagctgtcgctgccaccac
tggggggaggagggccatgatccaaaggaaccagaacagttgagaaaactgtttattggt
ggtctgagctttgaaactacagatgatagcttaagagaatattttgagaaatggggcaca
cttacagattgtgtggtgatgagagacccccaaacaaaacgttccaggggctttggtttt
gttacttacgcttgtgttgaagaggtggatgcagcaatgtgtgctcaaccacacaaggtt
gatggcnatgtagtggaaccaaagagagttgtttctagagatgattctataaagcctggt
gcccatctaacagtgaagaaaatttttgttggtggtattaaagaagatacagaagaatat
aatttgagagactactttgaaaagtatggcaagattgaaaccatagttatagaagacagg
catagtggaaaaaagagaggattttcttttgtaacttttgatgatcatgatacagttgat
aaaattgttattcataaataccacactattattgggcataattgtgaagtgaaaaaggcc
ctttctaaacaagaaatgcaatctgctgcatcacaaagaggtcgtggaggtgtatctggc
aactttatgggtcatggaagaaactttggaggtggtggaggtaactttggccgtggtgga
aactttggtggaagaggaggctatggtcatggaggtggtggcagcagagatagttatgga
ggaggtgatggtggatataatggatttggaggcgatggtggtaactatggtggtggtcct
ggttatagtagtagaggaggctatggtggtggtggacgaggatatggaagccaaggtggt
ggatatggtggcggtggtggaggatatgatggttacaatgaaggaggaaattttggaggt
aactgtggtggtggtaggagctataatgattttggaaattatagtggacaacagcaatca
aattacggacccatgaaggggggcagttttggtggaagaagctcggcaagtccctatggt
ggtggttatggatctggtggtggaagtggtggatgtggtagcagaaggttctaa
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