Globicephala melas (long-finned pilot whale): 115866112
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Entry
115866112 CDS
T11080
Symbol
NHLRC1
Name
(RefSeq) E3 ubiquitin-protein ligase NHLRC1
KO
K10602
E3 ubiquitin-protein ligase NHLRC1 [EC:
2.3.2.27
]
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115866112 (NHLRC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gmf04121
]
115866112 (NHLRC1)
Enzymes [BR:
gmf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115866112 (NHLRC1)
Ubiquitin system [BR:
gmf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115866112 (NHLRC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
Baculo_IE-1
Prok-RING_4
Beta-prop_EML_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
115866112
NCBI-ProteinID:
XP_030737185
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All DBs
Position
11:88811613..88813762
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AA seq
395 aa
AA seq
DB search
MGAEASGSGPALRELVREAETSLLECKVCFERFGHRQQRRPRNLPCGHVVCLACVAALAH
PRTLALECPFCRRACRGCDTSDCLPVLHLLELLGSALRPAPAAPRAAPSAPGVLTCHHAF
GGWGTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDAGGGCAHQFGEKGDAAQDIRYPLDV
TVTNDCHVVVTDAGDRSIKVFDFFGQIKLVIGGQFSLPWGVETTPQNGVMVTDAEAGSLH
LLEIDFPEGVLRRTERLQTHLCHPRGVAVSWLTGAIAVLEHPLAVGTGACSTTVKVFSAS
MQLIGQVDAFGLSLFFPSKITASAVTFDHQGNVIVADTSNLAVLCLGKPEEFPVLKPIIT
HGLSHPVALTFTKENSLLVLDSAAHSIKVYKVDWG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgggtgccgaggcttccgggagcgggccagcgctgcgggagctggtgcgcgaggccgag
accagcctgctcgagtgcaaggtgtgctttgagcggttcggccaccgccagcagcggcgc
ccacgcaacctgccctgcggccacgtggtctgcctggcctgcgtggccgccctggcgcac
ccgcggacgctggccctcgagtgccccttctgccggcgagcctgcaggggctgcgacacc
agcgactgcctgccggtgctgcacctcctggagctcctgggctccgcgctgcgcccggcc
ccagcggccccgcgcgccgccccctccgcccccggggtcctcacctgccaccacgccttc
ggaggctgggggaccctggtcaaccccactgggctggcgctgtgtcctaagacggggcgg
gtcgtggtggtgcacgacggcaggaggcgtgtcaagatctttgacgcggggggaggatgt
gcgcatcagtttggagagaagggggacgctgctcaggacattaggtatccacttgacgtc
accgtcacaaacgactgccatgtggttgtcaccgacgccggcgaccgctccatcaaagtg
tttgacttttttggccagattaagcttgtcatcggaggccagttctccttgccttggggt
gtggagaccacccctcagaatggggtcatggtaactgatgcggaggcggggtccctgcac
ctcctggaaatcgactttccagaaggggtcctccggagaactgaacggttgcaaactcac
ctgtgccatccccggggggtggcggtgtcctggctcaccggggccattgcggtcctagag
caccccctggctgtggggaccggggcctgcagcaccacggtgaaggtgttcagcgcaagt
atgcagctcatcggccaggtggatgcctttgggctgagcctctttttcccctccaaaata
accgcctccgctgtgacctttgatcaccaggggaacgtgattgttgccgatacttctaat
ctggctgtcctatgcttaggaaaacctgaggagtttccagtactgaagcccatcatcacc
cacggtctttcccatcctgtggcactgacctttaccaaggaaaattctcttcttgtgctg
gacagtgcagcccattctataaaagtctataaggttgactgggggtga
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