Globicephala melas (long-finned pilot whale): 115866121
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Entry
115866121 CDS
T11080
Symbol
ATXN1
Name
(RefSeq) ataxin-1
KO
K23616
ataxin 1/1L
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf04330
Notch signaling pathway
gmf05017
Spinocerebellar ataxia
gmf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115866121 (ATXN1)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
115866121 (ATXN1)
05022 Pathways of neurodegeneration - multiple diseases
115866121 (ATXN1)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
115866121
NCBI-ProteinID:
XP_030737216
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Position
11:89721847..90239003
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AA seq
807 aa
AA seq
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MKSNQERSNECLPPKKREIPATSRPSEDKATAVPSDNHRAEGVAWLPGHASGRGHAGGRL
GPAGPPAELGLQQGIGLHKALSAGLDYSPPSAPRSVPATTTMPAYPPPQSGAPVSPVQYA
HLPHTLQFIGSSQYGGPYAGFIPSQLISPTASPVTSAVASAAGAATPSQRSQLEAYSTLL
ANMGGLSQASGHKAEQQQHLGRTAGLLPPGSPPPTQQNQYMHISSSPQSAARPASPPAIP
VHLHPHQTMIPHTLTLGPSPQVVVQYSDSGSHFVTREATKKAESSRLQQGAQAKEILNGE
MEKGRRYGAPTAADLGLVKAGGKAVPHPYESRHVVVHPSPADYGSRDSSGVRASVMVLPN
SSTPAADLEVQQVTHREASPSALNDKSGLHLGKPGHRSYALSPQQALGPEGVKAAAVATL
SPHTVIQTTHSASEPLPVGLPATAFYAGTQPPVIGYLSSQQQAITYAGGLPPHLVLPGTQ
PLLIPVGSADMEGSGAASAIVTSSPQFAAVPHTFVTTALPKSENFSPEALVTQAAYPAMV
QAQIHLPVVQSVASPAAAPPTLPPYFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDL
KIDSSTVERIEDSHSPGVAVIQFAVGDHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQL
FDLPCSKLSVGDVCISLTLKNLKNGSVKKGQAVDPASVLLKHSKTDGLAGSRHRYAEQEN
GINQGSAQMLSENGELKFPEKIGLPAVPLLTKIEPSKPAATRKRRWSAPESRKLEKSEDE
PPLTLPKPSLISQEVKICIEGRSNVGK
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaaccaagagcgcagtaacgaatgcctgcctcccaagaagcgcgagatcccc
gccaccagccggccctcggaggacaaggccacggctgtgcccagcgacaaccaccgcgcg
gagggcgtggcatggctcccgggccacgcgagcggccggggccacgcgggcgggcggcta
gggccggcggggcccccggcagagctcggtttacagcagggaataggtttacacaaagcg
ctgtccgcggggctggactactccccacccagcgcgccccggtccgtcccggcgaccacg
acgatgcccgcgtacccgcccccgcagtccggggccccggtgtcgcccgtgcagtacgcc
cacctgccgcataccttacagttcatcggctcttcccagtacggcgggccctacgccggc
ttcatcccttctcagctgatctcccccacggccagccccgtcaccagtgcggtggcctcg
gccgcgggggccgccactccatcccagcgctcccagctggaggcctattctaccctgctg
gccaacatgggcggcctgagccaagcctcgggacacaaggctgagcagcagcagcacttg
ggcaggaccgcggggctcctgccccccgggtccccaccacccacccagcagaaccagtac
atgcacatctccagctctccgcagagcgccgcgcgcccggcctccccgccggccatcccc
gtccacctgcacccgcaccagacgatgatcccgcacacgctcaccctggggccctccccg
caggtcgtcgtgcagtacagcgactccggcagccactttgtcacccgcgaggccaccaag
aaagccgagagcagccggctgcagcagggcgcgcaggccaaggagatcctgaacggggag
atggagaagggccgcaggtacggggcgcccaccgcggccgacctgggcctggtgaaggcg
ggcggcaaggccgttccccacccgtacgagtccaggcacgtggtggtccaccccagccct
gccgactacggcagccgcgactcctccggggtgcgggcctctgtgatggtcctgcccaac
agtagcacccctgccgccgacctggaggtgcagcaggtcacccaccgagaggcctccccc
tccgccctcaacgacaaaagcggcctgcacctagggaagcccgggcaccggtcctacgcg
ctgtctccccagcaggccctgggccctgaaggcgtgaaggccgccgccgtcgccacgctg
tccccccacacggtcattcagaccacacacagtgcttcggagcccctcccggtgggactg
ccggccacagccttctacgcagggactcagccgcccgtcatcggctacctgagcagccag
cagcaagcgatcacctacgccggcggcctgcccccgcacctggtcctccccggcacccag
cccctgctcatccctgtgggcagcgctgacatggaggggtcgggggcagcctcggccatc
gtcacgtcgtcgccccagtttgctgcagtgcctcacacgttcgtcaccaccgcccttccc
aagagcgagaacttcagccccgaggccctggtcacccaggccgcctacccagccatggtg
caggcgcagatccacctgcccgtggtgcagtcggtggcatcccctgcagccgcgccccct
acgctgcctccctacttcatgaaaggctccatcatccagctggccaacggggagctgaag
aaggtggaggacttaaaaacggaagacttcatccagagtgcggagatcagcaacgacctg
aagatcgactccagcactgtggagaggatcgaggacagccacagcccgggcgtcgccgtg
atacagttcgctgtcggggatcaccgagcacaggtcagcgtggaagttttggtagagtat
cctttttttgtgtttggacagggctggtcatcctgttgcccggagagaaccagccagctc
tttgatttgccgtgttctaaactctccgttggggatgtctgtatctcgctcaccctcaag
aacctgaagaatggctctgttaaaaagggccaggccgtggatcccgccagtgtcctgctg
aagcactcaaagaccgacggcctcgcgggcagtagacacaggtacgccgagcaggaaaac
gggatcaatcagggaagtgcccagatgctctctgagaatggcgaactgaagtttccagaa
aaaattggattgcctgccgtgcccttgctcaccaaaatagaacccagcaagcccgcggcc
acgaggaagaggaggtggtcggcgccggagagccgcaaactggagaagtcggaagacgag
ccacctttgactcttcctaagccttctctcatttctcaggaggttaagatttgcattgaa
ggccgctctaatgtaggcaagtag
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