Globicephala melas (long-finned pilot whale): 115866125
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Entry
115866125 CDS
T11080
Symbol
JARID2
Name
(RefSeq) protein Jumonji isoform X1
KO
K11478
protein Jumonji
Organism
gmf Globicephala melas (long-finned pilot whale)
Pathway
gmf03083
Polycomb repressive complex
gmf04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
gmf00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115866125 (JARID2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
115866125 (JARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmf03036
]
115866125 (JARID2)
Chromosome and associated proteins [BR:
gmf03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
115866125 (JARID2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.2
115866125 (JARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JmjC
ARID
JmjN
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
115866125
NCBI-ProteinID:
XP_060164664
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All DBs
Position
11:complement(90897259..91140875)
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AA seq
1440 aa
AA seq
DB search
MSKERPKRNIIQKKYDDSDGIPWSEERVVRKVLYLSLKEFKNAQKRQHGEGIAGSLKAVN
GLLGNGQSKGLGPASEQSENEKDDASQVSSTSNDVSSSDFEEGPSRKRPRLQAQRKFAQS
QPNSPSTTPVKIVEPLLPPPATQISDLSKRKPKTEDFLTFLCLRGSPALPNSMVYFGSSQ
DEEDVEEEDDETEDVKTATNNASSSCQSTPRKGKAHKHVHNGHVFNGSSRSSREKEPVQK
HKSKEATPAKEKHSDPRADGRREQASTSHPPAAPSAGSSARGLPAHHHPPLHRSAQDLRK
QVSKVGGVTRMSSLGTSAASAKKMREVRPSPSKTVKYTATVTKGTVTYTKAKRELVKETK
PNHHKPSSAVNHTISGKTESSNAKTRKQVLSLGGASKSTGHTVNGLKVSGRLNPKSCTKE
GGGRQLREGLRNSKRRLEEAPPGDKPQSPPKKMKGEAGAAEGPGRKAAPAPAEKVPPGGH
GKKEVPERSLERNRPKRVSAGKGPPGRQAHGKPDGAPCENRSTSQSEPLPRPHEATAKAE
KGTGRAGWAAMDEIPVLRPSAKEFHDPLVYIESVRPQVEKYGMCRVIPPPDWRPECKLND
EMRFVTQIQHIHKLGRRWGPNVQRLACIKKHLRSQGITMDELPLIGGCELDLACFFRLIN
EMGGMQQVTDLKKWNKLADMLRIPKTAQDRLAKLQEAYCQYLLSYDSLSPEEHRRLEKEV
LMEKESLERRKGPLEGHTEQDYNRFHPLPRFEPKNGLINGVAHRNGFRSKLKEVGPAQLK
TGRRRLFAQEKEVVKEEDDRGILSDFHKCIYKGRSVSLTTFYRTARNIMNMCFSKEPAPA
EIEQEYWRLVEEKDCHVAVHCGKVDTNTHGSGFPVGKSEPFSRHGWNLTVLPNNTGSILR
HLGAVPGVTIPWLNIGMVFSTSCWSRDQNHLPYIDYLHTGADCIWYCIPAEEENKLEDVV
HTLLQANGTPGLQMLESNVMISPEVLCREGIKVHRTVQQSGQFVVCFPGSFVSKVCCGYS
VSETVHFATTQWTSMGFETAKEMKRRHIAKPFSMEKLLYQIAQAEAKKENGPTLSTISAL
LDELRDTELRQRRQLFEAGLHSSARYGSHEGSSAAPDGKKKPRKWLQLETSERRCQICQH
LCYLSMVVQENENVVFCLECALRHVEKQKSCRGLKLMYRYDEVSASRGGSGPLPAWSMSQ
LVVTACSRPGSRCLLAGRCLTWWEGSSLRQGGGVGRSGSSSTGLERPGAEAAGTFVLVRA
LSCPSEPVRSTLSSAFPPGLGASVRKEFGFRAWLPHCLEGTVPSSPVGAQNRPRPKSAGP
SQGSPSLQAEGRFGGLGGCVHLVSVSSEQPGTRPEEPSWPQPRGAGASGTQSADRRARLP
VSVSLPRSCQRFCCGSAHGELQSLRPVAELWAAPVPLSLPWGLGRHGAFHCLLLKASTSE
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggaaagacccaagaggaatatcattcagaagaaatacgatgacagtgatggg
attccgtggtcagaagaaagggtggtacgtaaagtcctttatttgtctctgaaggagttc
aagaatgcccagaagaggcagcatggtgaaggcattgctgggagcctgaaagcagtgaat
gggctccttggtaatggccagtctaagggattaggaccagcatcagaacagtcagagaat
gagaaggacgatgcatcccaagtgtcctcaactagcaacgatgttagttcttcagatttt
gaagaagggccgtcgaggaaaaggcccaggctgcaagcacaaaggaagtttgctcagtcc
cagccgaatagtcccagcacaactccagtaaagatagtggagccattgctaccccctcca
gctactcaaatttctgacctctctaaaaggaagcctaagacagaagattttcttactttt
ctctgccttcgaggttctcctgcgctgcccaacagcatggtatatttcggaagctctcag
gacgaggaggacgtcgaggaggaagatgatgagacagaagacgtcaaaacagccaccaac
aatgcttcatcttcatgccagtcgacccccaggaaaggaaaagcccacaagcatgttcac
aatggacatgttttcaatggttccagcaggtcatcacgggagaaggaacctgttcagaaa
cacaaaagcaaagaggccactccggcgaaggagaagcacagtgatccccgggccgacggc
cggagggagcaggcttccacgagccaccccccagcggccccctccgcgggctcctctgcc
agggggctccccgctcaccaccacccccctctgcatcggtcggctcaggacttacggaaa
caggtttctaaggtcggcggagtcactcgaatgtcatctctgggtaccagtgcagccagt
gccaaaaagatgcgcgaagtcagaccttcaccgtccaaaactgtgaagtacactgcaacg
gtgacgaaggggactgtcacatacaccaaagccaagagggaactggtcaaggaaaccaaa
cctaatcaccacaagcccagttcagctgtcaaccacacaatctcagggaaaactgaaagt
agcaatgcaaaaacccgaaaacaggtgctatccctcgggggggcgtccaagtccaccggg
cacaccgtcaatggcctcaaggtcagtggcaggttgaacccaaagtcatgcactaaggag
ggcggggggcggcagctgagggagggtctgcggaactccaagcggaggctggaagaggcg
cccccgggcgacaagccgcagtcgccccccaagaagatgaagggggaggcgggtgctgcg
gagggtcccggcaggaaggcggccccggcccccgcggagaaggtgccgcctggcggccac
gggaagaaggaggtgcccgagcggagcctggagaggaaccggccgaagcgggtgtcggcc
ggcaagggcccgccgggcagacaagcacacggcaagccggacggcgccccctgtgaaaat
cgttctacctcgcaatcggagcccctgccccggccgcacgaggcgacggccaaggccgag
aaggggaccggcagggccgggtgggcggccatggacgagatccccgtcttgcggccgtcg
gccaaggagttccacgacccgctcgtctacatcgagtcggtgcgccctcaggtggagaag
tacggcatgtgcagggtgatcccgcccccggactggcggcccgagtgcaagctcaacgac
gagatgcgcttcgtcacgcagatccagcacatccacaagctgggtcggcgctggggcccc
aacgtgcagcggctggcctgcatcaagaagcacctcagatctcagggcatcaccatggac
gagctcccactcataggaggctgtgagctcgacctggcctgctttttccggctgattaac
gagatgggcggcatgcagcaagtgactgacctcaaaaaatggaacaaactagcagacatg
ctgcgcatccccaaaaccgcccaggaccggctggccaagctgcaggaggcctactgccag
tacctgctctcctatgactccctgtcccccgaggagcaccggcgcctggagaaggaggtg
ctgatggagaaggagagcctggagaggcgcaaggggcccctggagggccacacggagcag
gactacaaccgcttccacccactgccccgcttcgagcccaagaacgggctcattaacggc
gtggcccacaggaacggcttccgcagcaagctgaaggaggtgggccccgcgcagctcaag
acggggcggcggcgactctttgctcaggaaaaggaggtggtgaaggaggaggacgacaga
ggcatcctcagtgacttccacaagtgcatatacaaggggaggtctgtttctttaacgact
ttttaccgaacagcaagaaatatcatgaacatgtgcttcagcaaggagcccgcaccagct
gaaatcgagcaagagtactggaggctcgtggaggagaaggactgccatgtggccgtgcac
tgcggcaaggtggacaccaacacccacggcagcggcttcccggtgggaaaatcagaaccg
ttttcaagacacggatggaacctcaccgtcctccccaataacacaggctccatcctgcgt
caccttggtgctgtgcctggagtgacaattccctggctaaatattggcatggtcttttct
acctcatgctggtctcgagaccaaaaccaccttccctacattgactacttacacactggt
gctgactgcatttggtattgcattcctgctgaggaggagaacaagctcgaggacgtggtg
cacaccctgctgcaagccaacggcacccccggcctgcagatgctcgagagcaacgtcatg
atctccccggaggtgctgtgcagggaggggatcaaggtgcacaggacggtgcagcagagc
ggccagtttgtcgtctgcttcccgggatcctttgtgtccaaagtgtgttgcggctacagc
gtctctgagaccgtgcacttcgccaccacccagtggacgagtatgggcttcgagacagcc
aaggagatgaagcgtcgccacatagctaagccgttctccatggagaagttactctaccag
atcgcacaagcggaagcgaaaaaggaaaacggtcccactctcagtaccatctcagccctt
ttggacgagctcagggacacggagctgcggcagcggcggcagctgttcgaggccggcctc
cattcctctgcccgctatggcagccacgagggcagcagtgccgcgcccgacgggaagaaa
aagcctcggaagtggctgcagctggagacctcggagaggaggtgtcagatctgtcagcac
ctgtgctacctgtccatggtcgtgcaggagaacgagaatgtggtcttctgcctggagtgt
gccctgcgccacgtggagaagcagaagtcctgccgcggcctgaagctcatgtaccgctac
gacgaggtcagtgcctcgcggggtggcagcggtcccctgcccgcgtggtccatgtcacag
ctcgtcgtgaccgcgtgcagccggcctggttccaggtgccttctggccggacggtgcctg
acgtggtgggaaggtagctccttgcgccaaggtgggggagtgggcaggtccggctcgagt
tccactggcctggagagaccaggagctgaggctgcagggacttttgtccttgtccgcgct
ttgtcgtgcccgagcgagcctgtccgcagcacgctcagctctgctttccctcctggcctc
ggtgcctcggttcgtaaggagttcggtttcagggcgtggctgccccactgtctggagggg
actgtgccttcatctccagtcggggcccagaacagaccgagaccgaaatcggcagggcca
agccagggctccccttccctccaggccgagggccgcttcgggggccttggcggctgtgtc
catctggtctctgtgtcctcagagcagcccgggactcggcctgaggagccttcctggccc
cagccccgcggggccggggcctctgggacacaaagtgccgatcgccgtgcccgtctgccc
gtgtcggtgtccctcccccgcagctgccagcggttctgctgtgggtctgcgcatggtgaa
cttcagagcctgcggccagttgctgagctatgggcagcacccgtgcccttgtccttaccc
tggggcctcggcagacacggagcctttcactgtttgctcctgaaggcttcaacttctgaa
taa
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